FFCP PHASE1:Hg19::chr21:45773271..45773282,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:45773271..45773282,+ to FFCP PHASE1:Hg19::chr21:45773271..45773282,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt=O94759 | |UniProt=O94759 | ||
|association_with_transcript=132bp_to_ENST00000397928,uc002zeu.1_5end | |||
|cluster_id=chr21:45773271..45773282,+ | |||
|description=CAGE_peak_13_at_TRPM2_5end | |||
|id=chr21:45773271..45773282,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.17e-26!172;CL:0000566!6.17e-26!172;CL:0002032!1.54e-25!165;CL:0000837!1.54e-25!165;CL:0000988!4.58e-24!182;CL:0000763!2.41e-23!112;CL:0000049!2.41e-23!112;CL:0000738!1.11e-15!140;CL:0002087!9.51e-15!119;CL:0000766!7.55e-14!76;CL:0002194!1.37e-13!63;CL:0000576!1.37e-13!63;CL:0000040!1.37e-13!63;CL:0000559!1.37e-13!63;CL:0000817!2.49e-13!3;CL:0002009!4.59e-13!65;CL:0002031!1.54e-12!124;CL:0000839!6.92e-12!70;CL:0000557!1.14e-11!71;CL:0000785!5.13e-09!2;CL:0000955!5.13e-09!2;CL:0000818!5.13e-09!2;CL:0000954!5.13e-09!2;CL:0000816!5.13e-09!2;CL:0000134!5.57e-09!358;CL:0002320!1.19e-08!365;CL:0000219!3.62e-08!390;CL:0000784!4.09e-07!3;CL:0000235!4.42e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.60e-23;3!CL:0000817;3.16e-18;1!CL:0000235;6.34e-12;6!CL:0000451;5.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.94e-23,3;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000235,7.48e-12,6;CL:0000763,1.47e-11,108;CL:0000049,1.47e-11,108;CL:0002032,1.70e-11,161;CL:0000837,1.70e-11,161;CL:0000738,3.79e-07,136;CL:0000451,5.00e-07,10;CL:0000817,6.14e-07,3;CL:0002194,6.98e-07,59;CL:0000576,6.98e-07,59;CL:0000040,6.98e-07,59;CL:0000559,6.98e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.28e-31!39;DOID:2531!8.70e-29!51;DOID:0060083!8.70e-29!51;DOID:8692!9.51e-18!31;DOID:0050686!1.10e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.18e-18;39!DOID:8692;6.78e-13;31!DOID:2531;1.33e-10;51!DOID:0060083;1.33e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.01e-20,39;DOID:2531,1.52e-15,51;DOID:0060083,1.52e-15,51;DOID:8692,2.30e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-11!102;UBERON:0003061!1.00e-11!102;UBERON:0002193!2.77e-10!112;UBERON:0002371!5.66e-10!80;UBERON:0002405!6.69e-10!115;UBERON:0004177!3.07e-09!7;UBERON:0001474!4.85e-09!86;UBERON:0002384!3.37e-08!375;UBERON:0004765!3.33e-07!101;UBERON:0001434!3.33e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14641561874808,0,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,3.89526875036401,0.0711418433484141,0,0.199579371432817,0,1.2700414963433,0,0.842391534340376,4.10822422259746,0,0,0,1.605880751037,1.21079824314629,0,0.343505344755765,0.921722292925374,0,1.00109485027145,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14641561874808,0,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,3.89526875036401,0.0711418433484141,0,0.199579371432817,0,1.2700414963433,0,0.842391534340376,4.10822422259746,0,0,0,1.605880751037,1.21079824314629,0,0.343505344755765,0.921722292925374,0,1.00109485027145,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@TRPM2 | |||
}} | }} |
Latest revision as of 18:49, 18 September 2015
Short description: | p13@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TRPM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 132bp_to_ENST00000397928, uc002zeu.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | O94759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.94e-23 | 3 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
macrophage | 7.48e-12 | 6 |
myeloid cell | 1.47e-11 | 108 |
common myeloid progenitor | 1.47e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.70e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-11 | 161 |
leukocyte | 3.79e-07 | 136 |
dendritic cell | 5.00e-07 | 10 |
precursor B cell | 6.14e-07 | 3 |
monopoietic cell | 6.98e-07 | 59 |
monocyte | 6.98e-07 | 59 |
monoblast | 6.98e-07 | 59 |
promonocyte | 6.98e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.01e-20 | 39 |
hematologic cancer | 1.52e-15 | 51 |
immune system cancer | 1.52e-15 | 51 |
myeloid leukemia | 2.30e-13 | 31 |