FFCP PHASE1:Hg19::chr10:71176561..71176571,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6865 | |EntrezGene=6865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11527 | |HGNC=11527 | ||
|TSSclassifier=strong | |||
|UniProt=P21452 | |UniProt=P21452 | ||
|association_with_transcript=51bp_to_ENST00000373306_5end | |association_with_transcript=51bp_to_ENST00000373306_5end | ||
|cluster_id=chr10:71176561..71176571,- | |||
|coexpression_cluster_id=C727 | |coexpression_cluster_id=C727 | ||
|description=CAGE_peak_4_at_TACR2_5end | |description=CAGE_peak_4_at_TACR2_5end | ||
|id=chr10:71176561..71176571,- | |id=chr10:71176561..71176571,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.06e-19;1!UBERON:0001045;3.91e-19;1!UBERON:0004874;3.91e-19;1!UBERON:0009847;2.19e-07;3!UBERON:0003353;2.19e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.78e-20!11;UBERON:0000160!4.57e-19!27;UBERON:0001155!3.36e-16!9;UBERON:0005409!1.31e-14!35;UBERON:0007023!1.42e-14!115;UBERON:0001046!1.73e-11!19;UBERON:0004921!8.45e-11!129;UBERON:0004185!8.45e-11!129;UBERON:0001154!3.10e-10!1;UBERON:0001153!3.10e-10!1;UBERON:0000989!3.40e-10!1;UBERON:0008811!3.40e-10!1;UBERON:0006258!3.40e-10!1;UBERON:0005876!3.40e-10!1;UBERON:0004874!3.40e-10!1;UBERON:0001007!5.03e-10!155;UBERON:0001555!5.03e-10!155;UBERON:0007026!5.03e-10!155;UBERON:0000996!5.79e-10!1;UBERON:0006834!6.33e-10!1;UBERON:0004119!5.52e-09!169;UBERON:0000925!5.52e-09!169;UBERON:0006595!5.52e-09!169;UBERON:0004907!5.89e-08!5 | |ontology_enrichment_uberon=UBERON:0000059!3.78e-20!11;UBERON:0000160!4.57e-19!27;UBERON:0001155!3.36e-16!9;UBERON:0005409!1.31e-14!35;UBERON:0007023!1.42e-14!115;UBERON:0001046!1.73e-11!19;UBERON:0004921!8.45e-11!129;UBERON:0004185!8.45e-11!129;UBERON:0001154!3.10e-10!1;UBERON:0001153!3.10e-10!1;UBERON:0000989!3.40e-10!1;UBERON:0008811!3.40e-10!1;UBERON:0006258!3.40e-10!1;UBERON:0005876!3.40e-10!1;UBERON:0004874!3.40e-10!1;UBERON:0001007!5.03e-10!155;UBERON:0001555!5.03e-10!155;UBERON:0007026!5.03e-10!155;UBERON:0000996!5.79e-10!1;UBERON:0006834!6.33e-10!1;UBERON:0004119!5.52e-09!169;UBERON:0000925!5.52e-09!169;UBERON:0006595!5.52e-09!169;UBERON:0004907!5.89e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001155;2.42e-32;9!UBERON:0000059;1.47e-26;11!UBERON:0000160;4.68e-25;17!UBERON:0005409;1.17e-19;22!UBERON:0001154;3.91e-19;1!UBERON:0000989;3.91e-19;1!UBERON:0001153;3.91e-19;1!UBERON:0008811;3.91e-19;1!UBERON:0009854;3.91e-19;1!UBERON:0004921;3.79e-17;33!UBERON:0001255;2.17e-10;2!UBERON:0001556;2.17e-10;2!UBERON:0001555;2.66e-08;54!UBERON:0001043;2.40e-07;3!UBERON:0002114;2.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.90e-32,9;UBERON:0000059,1.20e-26,11;UBERON:0000160,4.46e-25,17;UBERON:0001154,3.25e-19,1;UBERON:0001153,3.25e-19,1;UBERON:0001045,3.25e-19,1;UBERON:0000989,3.91e-19,1;UBERON:0008811,3.91e-19,1;UBERON:0006258,3.91e-19,1;UBERON:0005876,3.91e-19,1;UBERON:0004874,3.91e-19,1;UBERON:0005409,2.00e-17,25;UBERON:0001255,2.27e-10,2;UBERON:0001556,2.27e-10,2;UBERON:0007023,1.02e-09,114;UBERON:0004921,3.02e-09,118;UBERON:0001046,3.43e-09,19;UBERON:0001007,1.97e-07,145;UBERON:0001555,1.97e-07,145;UBERON:0007026,1.97e-07,145;UBERON:0001043,2.32e-07,3;UBERON:0009143,2.32e-07,3;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,3.05794557474494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,5.48436899920703,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29762656060626,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63109247818033,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.218559560503957,0,6.12870804384764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,3.05794557474494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,5.48436899920703,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29762656060626,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63109247818033,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.218559560503957,0,6.12870804384764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | ||
|short_description=p4@TACR2 | |short_description=p4@TACR2 | ||
}} | }} |
Latest revision as of 01:04, 19 September 2015
Short description: | p4@TACR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TACR2_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | 51bp_to_ENST00000373306_5end |
EntrezGene: | TACR2 |
HGNC: | 11527 |
UniProt: | P21452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 1.90e-32 | 9 |
large intestine | 1.20e-26 | 11 |
intestine | 4.46e-25 | 17 |
vermiform appendix | 3.25e-19 | 1 |
caecum | 3.25e-19 | 1 |
midgut | 3.25e-19 | 1 |
penis | 3.91e-19 | 1 |
intromittent organ | 3.91e-19 | 1 |
lateral plate mesenchyme | 3.91e-19 | 1 |
undifferentiated genital tubercle | 3.91e-19 | 1 |
somatopleure | 3.91e-19 | 1 |
gastrointestinal system | 2.00e-17 | 25 |
urinary bladder | 2.27e-10 | 2 |
lower urinary tract | 2.27e-10 | 2 |
adult organism | 1.02e-09 | 114 |
subdivision of digestive tract | 3.02e-09 | 118 |
hindgut | 3.43e-09 | 19 |
digestive system | 1.97e-07 | 145 |
digestive tract | 1.97e-07 | 145 |
primitive gut | 1.97e-07 | 145 |
esophagus | 2.32e-07 | 3 |
esophageal region | 2.32e-07 | 3 |
duodenum | 3.35e-07 | 2 |