FFCP PHASE1:Hg19::chr12:53613935..53613947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5916 | |EntrezGene=5916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9866 | |HGNC=9866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549018_5end | |association_with_transcript=0bp_to_ENST00000549018_5end | ||
|cluster_id=chr12:53613935..53613947,- | |||
|description=CAGE_peak_8_at_RARG_5end | |description=CAGE_peak_8_at_RARG_5end | ||
|id=chr12:53613935..53613947,- | |id=chr12:53613935..53613947,- | ||
|ontology_enrichment_celltype=CL:0000055!2.41e-09!180;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000393!5.74e-07!60;CL:0000211!5.74e-07!60;CL:0000187!7.15e-07!54;CL:0000183!9.50e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.41e-09!180;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000393!5.74e-07!60;CL:0000211!5.74e-07!60;CL:0000187!7.15e-07!54;CL:0000183!9.50e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000214;6.29e-09;3!CL:0002321;1.12e-08;15!CL:0002600;6.16e-07;2!CL:0002602;6.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.78e-09,3;CL:0002600,2.91e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.70e-09!83;UBERON:0002329!7.70e-09!83;UBERON:0003077!7.70e-09!83;UBERON:0003059!7.70e-09!83;UBERON:0007282!7.70e-09!83;UBERON:0009618!7.70e-09!83;UBERON:0007285!7.70e-09!83;UBERON:0002385!1.36e-07!63;UBERON:0001015!1.36e-07!63;UBERON:0000383!1.36e-07!63;UBERON:0001134!2.00e-07!61;UBERON:0002036!2.00e-07!61;UBERON:0003082!2.00e-07!61;UBERON:0004290!2.23e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;7.29e-17;8!UBERON:0000982;7.29e-17;8!UBERON:0004770;7.29e-17;8!UBERON:0011135;9.00e-10;5!UBERON:0002216;9.00e-10;5!UBERON:0011134;9.00e-10;5!UBERON:0002209;9.00e-10;5!UBERON:0002213;9.00e-10;5!UBERON:0007844;9.00e-10;5!UBERON:0011138;9.00e-10;5!UBERON:0001130;9.00e-10;5!UBERON:0001066;9.00e-10;5!UBERON:0001468;9.00e-10;5!UBERON:0006915;6.29e-09;3!UBERON:0007616;6.29e-09;3!UBERON:0002217;6.29e-09;3!UBERON:0002018;6.29e-09;3!UBERON:0001052;1.55e-07;4!UBERON:0004765;1.63e-07;26!UBERON:0006444;6.16e-07;2!UBERON:0001995;6.16e-07;2!UBERON:0004715;6.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,8.00e-17,8;UBERON:0000982,8.00e-17,8;UBERON:0004770,8.00e-17,8;UBERON:0011135,1.89e-09,5;UBERON:0002216,1.89e-09,5;UBERON:0011134,1.89e-09,5;UBERON:0002209,1.89e-09,5;UBERON:0002213,1.89e-09,5;UBERON:0005856,1.89e-09,5;UBERON:0005866,1.89e-09,5;UBERON:0005863,1.89e-09,5;UBERON:0007844,1.89e-09,5;UBERON:0011138,1.89e-09,5;UBERON:0001130,1.89e-09,5;UBERON:0001066,1.89e-09,5;UBERON:0001468,1.89e-09,5;UBERON:0006915,2.78e-09,3;UBERON:0007616,2.78e-09,3;UBERON:0002217,2.78e-09,3;UBERON:0002018,2.78e-09,3;UBERON:0001052,1.81e-07,4;UBERON:0003126,8.34e-07,7;UBERON:0001005,8.34e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,1.11389717664042,2.31978163009541,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.314843125254717,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0.645484683583826,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0.336985893439485,0.450530678524519,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0.668745981562712,0,0,0,0.222820913770347,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0.822189523018381,1.65810010671509,0,0.741432815810302,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0.722878304769133,0,0.724232594804119,2.3858578411533,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0.741568885568859,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0,0.379891534993739,0.529636723252875,0,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.134710672069688,0,0,0.576175924479999,0.468642863667593,2.18512053781224,0,0.747243402759005,0.117434498643765,0.323745888736263,0,1.22492502752936,0.61417158655884,1.03325781175765,2.37600571456411,0,0,0.718618141816238,0.673344455816265,0.375355559615893,0.277064115484183,0.877955241761676,0.612975591598039,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,1.28820270022815,0.744467425326359,0.168776332241266,1.16924406193438,1.51460264546469,0.0920498986422993,2.10139873864455,0,0.503760491138201,0.508681776931463,0,0,0,2.43947412259191,1.85541675650079,0.929551542956147,0.621966330092223,2.52320850875628,1.82488679537915,0,0,2.76269842704961,1.39310378409594,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.433099343283221,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0.207328115540772,0,0.12624243342638,0,1.14596527667483,0,0,0.411309970813294,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.531876233169741,0,0.771622122786426,1.41849132023278,2.1313774321288,0,1.62786481617433,0,0.325736184293735,0,0.791951872933429,0,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0.144781306667579,1.64381058040307,1.07436577943937,0.560425719967636,0.394061520403854,0.862510299438069,1.02674429023799,0,0,0,0,0,0,0,0,1.10422342547226,2.50085260529839,0.271265023699736,0.623912584592421,1.07057393278297,0.157702415033935,0.117141414992713,0,0,0,0,0.553107505625109,1.12948698808508,0.391602314925481,0.343143423810856,0.413536052245775,1.50999940573032,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.574890092096664,0,0.464841513839837,0,0.200506470303285,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0,0,0,0.773365746336976,0.616194468458578,0.307007349452259,0.413509717453592,0.966782203814463,0.435050081742686,0.511359764496605,0.267096106940212,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0.31481234683064,2.0911118104818,0.924100740528266,1.06461206063404,1.73986598415015,0.55597265731176,0,0,0.316379424718726,0.38126038784765,0.767693373934002,0.855877976067841,0.318203247925937,0,0.359744915166629,0.274537029736055,0.353437207037059,0.404364963146632,1.58510321173008,0.421258456238981,0,0.974853958525138,0,0.682499557039929,0.707027159768564,2.26016233240486,0.551365343546124,0.66343897524122,1.31535265576129,1.73632660280006,2.62357900818653,0,0.92947049429925,0.845086807596724,0.430234056612155,0.589494246078727,0,0,1.26664581178598,1.97576935775941,0.75894634753143,0.699869440489966,0.0962221127255121,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0.1605880751037,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,0.1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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,1.11389717664042,2.31978163009541,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.314843125254717,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0.645484683583826,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0.336985893439485,0.450530678524519,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0.668745981562712,0,0,0,0.222820913770347,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0.822189523018381,1.65810010671509,0,0.741432815810302,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,0.236777252044017,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0.722878304769133,0,0.724232594804119,2.3858578411533,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0.741568885568859,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0,0.379891534993739,0.529636723252875,0,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.134710672069688,0,0,0.576175924479999,0.468642863667593,2.18512053781224,0,0.747243402759005,0.117434498643765,0.323745888736263,0,1.22492502752936,0.61417158655884,1.03325781175765,2.37600571456411,0,0,0.718618141816238,0.673344455816265,0.375355559615893,0.277064115484183,0.877955241761676,0.612975591598039,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,1.28820270022815,0.744467425326359,0.168776332241266,1.16924406193438,1.51460264546469,0.0920498986422993,2.10139873864455,0,0.503760491138201,0.508681776931463,0,0,0,2.43947412259191,1.85541675650079,0.929551542956147,0.621966330092223,2.52320850875628,1.82488679537915,0,0,2.76269842704961,1.39310378409594,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.433099343283221,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,0.207328115540772,0,0.12624243342638,0,1.14596527667483,0,0,0.411309970813294,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.531876233169741,0,0.771622122786426,1.41849132023278,2.1313774321288,0,1.62786481617433,0,0.325736184293735,0,0.791951872933429,0,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0.144781306667579,1.64381058040307,1.07436577943937,0.560425719967636,0.394061520403854,0.862510299438069,1.02674429023799,0,0,0,0,0,0,0,0,1.10422342547226,2.50085260529839,0.271265023699736,0.623912584592421,1.07057393278297,0.157702415033935,0.117141414992713,0,0,0,0,0.553107505625109,1.12948698808508,0.391602314925481,0.343143423810856,0.413536052245775,1.50999940573032,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.574890092096664,0,0.464841513839837,0,0.200506470303285,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0,0,0,0.773365746336976,0.616194468458578,0.307007349452259,0.413509717453592,0.966782203814463,0.435050081742686,0.511359764496605,0.267096106940212,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0.31481234683064,2.0911118104818,0.924100740528266,1.06461206063404,1.73986598415015,0.55597265731176,0,0,0.316379424718726,0.38126038784765,0.767693373934002,0.855877976067841,0.318203247925937,0,0.359744915166629,0.274537029736055,0.353437207037059,0.404364963146632,1.58510321173008,0.421258456238981,0,0.974853958525138,0,0.682499557039929,0.707027159768564,2.26016233240486,0.551365343546124,0.66343897524122,1.31535265576129,1.73632660280006,2.62357900818653,0,0.92947049429925,0.845086807596724,0.430234056612155,0.589494246078727,0,0,1.26664581178598,1.97576935775941,0.75894634753143,0.699869440489966,0.0962221127255121,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0.1605880751037,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,0.1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| ||
|short_description=p8@RARG | |short_description=p8@RARG | ||
}} | }} |
Latest revision as of 02:12, 19 September 2015
Short description: | p8@RARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RARG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549018_5end |
EntrezGene: | RARG |
HGNC: | 9866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.78e-09 | 3 |
smooth muscle cell of trachea | 2.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
articulation | 8.00e-17 | 8 |
skeletal joint | 8.00e-17 | 8 |
articular system | 8.00e-17 | 8 |
intervertebral cartilage | 1.89e-09 | 5 |
symphysis | 1.89e-09 | 5 |
nonsynovial joint | 1.89e-09 | 5 |
fibrous joint | 1.89e-09 | 5 |
cartilaginous joint | 1.89e-09 | 5 |
developing mesenchymal condensation | 1.89e-09 | 5 |
pre-cartilage condensation | 1.89e-09 | 5 |
cartilaginous condensation | 1.89e-09 | 5 |
cartilage element | 1.89e-09 | 5 |
post-cranial axial skeletal system | 1.89e-09 | 5 |
vertebral column | 1.89e-09 | 5 |
intervertebral disk | 1.89e-09 | 5 |
intervertebral joint | 1.89e-09 | 5 |
stratified squamous epithelium | 2.78e-09 | 3 |
layer of synovial tissue | 2.78e-09 | 3 |
synovial joint | 2.78e-09 | 3 |
synovial membrane of synovial joint | 2.78e-09 | 3 |
rectum | 1.81e-07 | 4 |
trachea | 8.34e-07 | 7 |
respiratory airway | 8.34e-07 | 7 |