FFCP PHASE1:Hg19::chr3:57583085..57583121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378 | |EntrezGene=378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=655 | |HGNC=655 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDB3 | |UniProt=F8WDB3 | ||
|association_with_transcript=0bp_to_ENST00000486310,ENST00000495354_5end | |association_with_transcript=0bp_to_ENST00000486310,ENST00000495354_5end | ||
|cluster_id=chr3:57583085..57583121,- | |||
|coexpression_cluster_id=C938 | |coexpression_cluster_id=C938 | ||
|description=CAGE_peak_2_at_ARF4_5end | |description=CAGE_peak_2_at_ARF4_5end | ||
|id=chr3:57583085..57583121,- | |id=chr3:57583085..57583121,- | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-40!180;CL:0000057!2.99e-22!75;CL:0000548!7.92e-21!679;CL:0000004!7.92e-21!679;CL:0000255!7.92e-21!679;CL:0000680!2.04e-20!57;CL:0000056!2.04e-20!57;CL:0000355!2.04e-20!57;CL:0000144!2.51e-20!625;CL:0000187!8.79e-20!54;CL:0000012!1.02e-19!682;CL:0002371!1.04e-19!591;CL:0000192!3.62e-19!42;CL:0000514!3.62e-19!42;CL:0000183!8.10e-19!59;CL:0000393!1.02e-18!60;CL:0000211!1.02e-18!60;CL:0000220!2.09e-18!246;CL:0000222!2.34e-18!119;CL:0002321!5.74e-18!248;CL:0000359!2.38e-16!32;CL:0000048!3.68e-10!430;CL:0000723!5.85e-10!436;CL:0000034!9.03e-09!444;CL:0002334!5.47e-08!12;CL:0000003!1.40e-07!722;CL:0002620!3.13e-07!23;CL:0000499!4.01e-07!27 | |ontology_enrichment_celltype=CL:0000055!1.41e-40!180;CL:0000057!2.99e-22!75;CL:0000548!7.92e-21!679;CL:0000004!7.92e-21!679;CL:0000255!7.92e-21!679;CL:0000680!2.04e-20!57;CL:0000056!2.04e-20!57;CL:0000355!2.04e-20!57;CL:0000144!2.51e-20!625;CL:0000187!8.79e-20!54;CL:0000012!1.02e-19!682;CL:0002371!1.04e-19!591;CL:0000192!3.62e-19!42;CL:0000514!3.62e-19!42;CL:0000183!8.10e-19!59;CL:0000393!1.02e-18!60;CL:0000211!1.02e-18!60;CL:0000220!2.09e-18!246;CL:0000222!2.34e-18!119;CL:0002321!5.74e-18!248;CL:0000359!2.38e-16!32;CL:0000048!3.68e-10!430;CL:0000723!5.85e-10!436;CL:0000034!9.03e-09!444;CL:0002334!5.47e-08!12;CL:0000003!1.40e-07!722;CL:0002620!3.13e-07!23;CL:0000499!4.01e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.72e-15;32!CL:0000192;1.28e-13;43!CL:0000187;7.95e-11;55!CL:0000057;9.78e-10;73!CL:0000393;1.19e-09;61!CL:0000211;1.19e-09;61!CL:0000134;1.93e-08;55!CL:0002334;5.47e-08;12!CL:0002320;8.06e-08;188!CL:0000048;9.23e-08;58!CL:0000499;1.14e-07;28!CL:0000723;1.30e-07;61!CL:0002620;3.13e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.94e-23,76;CL:0000680,2.50e-20,58;CL:0000056,2.50e-20,58;CL:0000355,2.50e-20,58;CL:0000187,1.09e-19,55;CL:0000192,5.10e-19,43;CL:0000514,5.10e-19,43;CL:0000393,1.17e-18,61;CL:0000211,1.17e-18,61;CL:0000222,2.31e-18,121;CL:0002321,4.56e-18,250;CL:0000359,2.38e-16,32;CL:0000048,1.95e-10,427;CL:0000723,3.14e-10,433;CL:0000034,5.08e-09,441;CL:0002334,5.47e-08,12;CL:0000499,1.11e-07,28;CL:0002620,3.13e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-13;43!CL:0000355;1.23e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.07e-22!83;UBERON:0002329!1.07e-22!83;UBERON:0003077!1.07e-22!83;UBERON:0003059!1.07e-22!83;UBERON:0007282!1.07e-22!83;UBERON:0009618!1.07e-22!83;UBERON:0007285!1.07e-22!83;UBERON:0005256!5.17e-20!143;UBERON:0004290!5.57e-20!70;UBERON:0000486!2.58e-19!82;UBERON:0002100!5.23e-18!216;UBERON:0001134!6.49e-18!61;UBERON:0002036!6.49e-18!61;UBERON:0003082!6.49e-18!61;UBERON:0002385!5.78e-17!63;UBERON:0001015!5.78e-17!63;UBERON:0000383!5.78e-17!63;UBERON:0000490!7.42e-17!138;UBERON:0001637!9.84e-16!42;UBERON:0003509!9.84e-16!42;UBERON:0004572!9.84e-16!42;UBERON:0002049!2.38e-15!79;UBERON:0007798!2.38e-15!79;UBERON:0003914!2.28e-14!118;UBERON:0004872!2.32e-14!84;UBERON:0003104!1.74e-13!238;UBERON:0009142!1.74e-13!238;UBERON:0001981!3.43e-13!60;UBERON:0007500!3.43e-13!60;UBERON:0004537!3.43e-13!60;UBERON:0006965!3.43e-13!60;UBERON:0000055!3.52e-13!69;UBERON:0004573!1.30e-12!33;UBERON:0004571!1.30e-12!33;UBERON:0004535!4.00e-11!110;UBERON:0000468!4.95e-11!659;UBERON:0000926!8.37e-11!448;UBERON:0004120!8.37e-11!448;UBERON:0006603!8.37e-11!448;UBERON:0000475!1.02e-10!365;UBERON:0001009!1.87e-10!113;UBERON:0002199!1.76e-09!45;UBERON:0002416!1.76e-09!45;UBERON:0003102!5.34e-09!95;UBERON:0000480!9.93e-09!626;UBERON:0000467!1.31e-08!625;UBERON:0002097!5.11e-08!40;UBERON:0000481!7.98e-08!347;UBERON:0000119!2.36e-07!312;UBERON:0000483!6.78e-07!309 | |ontology_enrichment_uberon=UBERON:0000914!1.07e-22!83;UBERON:0002329!1.07e-22!83;UBERON:0003077!1.07e-22!83;UBERON:0003059!1.07e-22!83;UBERON:0007282!1.07e-22!83;UBERON:0009618!1.07e-22!83;UBERON:0007285!1.07e-22!83;UBERON:0005256!5.17e-20!143;UBERON:0004290!5.57e-20!70;UBERON:0000486!2.58e-19!82;UBERON:0002100!5.23e-18!216;UBERON:0001134!6.49e-18!61;UBERON:0002036!6.49e-18!61;UBERON:0003082!6.49e-18!61;UBERON:0002385!5.78e-17!63;UBERON:0001015!5.78e-17!63;UBERON:0000383!5.78e-17!63;UBERON:0000490!7.42e-17!138;UBERON:0001637!9.84e-16!42;UBERON:0003509!9.84e-16!42;UBERON:0004572!9.84e-16!42;UBERON:0002049!2.38e-15!79;UBERON:0007798!2.38e-15!79;UBERON:0003914!2.28e-14!118;UBERON:0004872!2.32e-14!84;UBERON:0003104!1.74e-13!238;UBERON:0009142!1.74e-13!238;UBERON:0001981!3.43e-13!60;UBERON:0007500!3.43e-13!60;UBERON:0004537!3.43e-13!60;UBERON:0006965!3.43e-13!60;UBERON:0000055!3.52e-13!69;UBERON:0004573!1.30e-12!33;UBERON:0004571!1.30e-12!33;UBERON:0004535!4.00e-11!110;UBERON:0000468!4.95e-11!659;UBERON:0000926!8.37e-11!448;UBERON:0004120!8.37e-11!448;UBERON:0006603!8.37e-11!448;UBERON:0000475!1.02e-10!365;UBERON:0001009!1.87e-10!113;UBERON:0002199!1.76e-09!45;UBERON:0002416!1.76e-09!45;UBERON:0003102!5.34e-09!95;UBERON:0000480!9.93e-09!626;UBERON:0000467!1.31e-08!625;UBERON:0002097!5.11e-08!40;UBERON:0000481!7.98e-08!347;UBERON:0000119!2.36e-07!312;UBERON:0000483!6.78e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.78e-11;33!UBERON:0004571;2.78e-11;33!UBERON:0001637;5.60e-11;42!UBERON:0003509;5.60e-11;42!UBERON:0004572;5.60e-11;42!UBERON:0007500;2.66e-08;56!UBERON:0001981;2.66e-08;56!UBERON:0004537;2.66e-08;56!UBERON:0002384;3.23e-07;198!UBERON:0002049;4.26e-07;75!UBERON:0007798;4.26e-07;75!UBERON:0002097;7.05e-07;41 | |||
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6,59.9463080607046 | ||
|short_description=p2@ARF4 | |short_description=p2@ARF4 | ||
}} | }} |
Latest revision as of 04:26, 19 September 2015
Short description: | p2@ARF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARF4_5end |
Coexpression cluster: | C938_leiomyoma_Smooth_Preadipocyte_hepatic_basal_Adipocyte_Ewing |
Association with transcript: | 0bp_to_ENST00000486310, ENST00000495354_5end |
EntrezGene: | ARF4 |
HGNC: | 655 |
UniProt: | F8WDB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.94e-23 | 76 |
muscle precursor cell | 2.50e-20 | 58 |
myoblast | 2.50e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.50e-20 | 58 |
muscle cell | 1.09e-19 | 55 |
smooth muscle cell | 5.10e-19 | 43 |
smooth muscle myoblast | 5.10e-19 | 43 |
electrically responsive cell | 1.17e-18 | 61 |
electrically active cell | 1.17e-18 | 61 |
mesodermal cell | 2.31e-18 | 121 |
embryonic cell | 4.56e-18 | 250 |
vascular associated smooth muscle cell | 2.38e-16 | 32 |
multi fate stem cell | 1.95e-10 | 427 |
somatic stem cell | 3.14e-10 | 433 |
stem cell | 5.08e-09 | 441 |
preadipocyte | 5.47e-08 | 12 |
stromal cell | 1.11e-07 | 28 |
skin fibroblast | 3.13e-07 | 23 |