FFCP PHASE1:Hg19::chr18:28622729..28622751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1825 | |EntrezGene=1825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3037 | |HGNC=3037 | ||
|TSSclassifier=strong | |||
|UniProt=Q14574 | |UniProt=Q14574 | ||
|association_with_transcript=29bp_to_ENST00000360428,ENST00000434452,NM_001941,NM_024423,uc002kwi.3,uc002kwj.3_5end | |association_with_transcript=29bp_to_ENST00000360428,ENST00000434452,NM_001941,NM_024423,uc002kwi.3,uc002kwj.3_5end | ||
|cluster_id=chr18:28622729..28622751,- | |||
|coexpression_cluster_id=C748 | |coexpression_cluster_id=C748 | ||
|description=CAGE_peak_2_at_DSC3_5end | |description=CAGE_peak_2_at_DSC3_5end | ||
|id=chr18:28622729..28622751,- | |id=chr18:28622729..28622751,- | ||
|ontology_enrichment_celltype=CL:0000066!5.45e-15!254;CL:0002076!4.81e-13!43;CL:0000076!3.58e-09!62;CL:0002251!1.41e-08!21;CL:0000223!3.45e-08!59;CL:0002159!1.46e-07!13;CL:0000622!9.37e-07!5 | |ontology_enrichment_celltype=CL:0000066!5.45e-15!254;CL:0002076!4.81e-13!43;CL:0000076!3.58e-09!62;CL:0002251!1.41e-08!21;CL:0000223!3.45e-08!59;CL:0002159!1.46e-07!13;CL:0000622!9.37e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.55e-13;19!CL:0002076;4.08e-12;42!CL:0002251;1.90e-10;20!CL:0002159;2.07e-09;14!CL:0000622;1.01e-08;5!CL:0002368;1.91e-07;13!CL:0000154;4.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.32e-15,42;CL:0000066,9.66e-15,253;CL:0000349,1.73e-13,19;CL:0000076,2.13e-11,63;CL:0002251,1.96e-10,20;CL:0000223,5.42e-10,58;CL:0002159,2.01e-09,14;CL:0000622,1.06e-08,5;CL:0002368,1.69e-07,13;CL:0000154,4.19e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.33e-08!14 | |ontology_enrichment_disease=DOID:1749!1.33e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.42e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.27e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.27e-13!169;UBERON:0000925!3.27e-13!169;UBERON:0006595!3.27e-13!169;UBERON:0000478!2.50e-11!24;UBERON:0005631!6.01e-10!14;UBERON:0000158!6.01e-10!14;UBERON:0000161!1.64e-09!35;UBERON:0001004!1.45e-08!72;UBERON:0001444!7.38e-08!48;UBERON:0000166!1.23e-07!21;UBERON:0003124!1.82e-07!7;UBERON:0001007!2.56e-07!155;UBERON:0001555!2.56e-07!155;UBERON:0007026!2.56e-07!155;UBERON:0000922!4.94e-07!612 | |ontology_enrichment_uberon=UBERON:0004119!3.27e-13!169;UBERON:0000925!3.27e-13!169;UBERON:0006595!3.27e-13!169;UBERON:0000478!2.50e-11!24;UBERON:0005631!6.01e-10!14;UBERON:0000158!6.01e-10!14;UBERON:0000161!1.64e-09!35;UBERON:0001004!1.45e-08!72;UBERON:0001444!7.38e-08!48;UBERON:0000166!1.23e-07!21;UBERON:0003124!1.82e-07!7;UBERON:0001007!2.56e-07!155;UBERON:0001555!2.56e-07!155;UBERON:0007026!2.56e-07!155;UBERON:0000922!4.94e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.27e-13;24!UBERON:0005631;6.93e-09;10!UBERON:0000158;6.93e-09;10!UBERON:0000486;1.18e-08;12!UBERON:0005910;2.37e-08;6!UBERON:0000365;3.21e-07;5!UBERON:0010371;5.75e-07;31!UBERON:0000165;9.46e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.87e-16,160;UBERON:0000925,8.87e-16,160;UBERON:0006595,8.87e-16,160;UBERON:0005631,1.71e-13,14;UBERON:0000158,1.71e-13,14;UBERON:0000478,4.66e-13,24;UBERON:0000153,2.24e-10,62;UBERON:0007811,2.24e-10,62;UBERON:0001004,9.93e-10,74;UBERON:0003124,1.13e-09,7;UBERON:0000033,9.73e-09,56;UBERON:0008814,1.42e-08,18;UBERON:0005910,2.29e-08,6;UBERON:0001007,3.77e-08,145;UBERON:0001555,3.77e-08,145;UBERON:0007026,3.77e-08,145;UBERON:0000166,5.71e-08,22;UBERON:0000161,6.98e-08,36;UBERON:0000365,3.15e-07,5;UBERON:0000065,3.80e-07,54;UBERON:0001444,7.03e-07,49;UBERON:0006562,7.39e-07,11 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,12.8880409556802,9.23184423799587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23852898652861,1.83884244895785,5.12050061923025,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38981203585091,5.75381528295886,0,0,0,0,0,0.378139268656271,1.55210578223795,1.05401742831751,0.196468613246569,6.55731518926576,19.2807910247903,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3911037207036,0,0,0,0,0.354668382198357,3.92474320099615,0,0,4.35695449559673,0.404132016209064,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91936317276128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6452155542892,17.4557517178134,11.1853792201711,0,0.132529768321485,0.929551542956147,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0.122988438543114,0.514703430895577,33.5835873350394,5.62008766288098,17.5925701720354,37.9612625149971,0,0,0,0.231860809950154,6.34006948873437,0,0,0,0,0,0,0,0,8.43604505880993,17.6381234608803,11.3420077793909,23.9121255616605,15.9848666182679,14.9519244874432,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,4.65378176728,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,2.46972101034231,0,0,1.58390374586686,6.33022691825131,3.48613383440118,8.49770425047485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,1.10422342547226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09382714338778,8.32177197552485,17.5386370131215,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,9.02279116364782,20.7182225105767,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,3.60816110269676,6.18218949862176,1.854738209659,0,0,15.5051695258967,16.251506150913,0,0.290012154876366,0,0,0.275673144969061,1.28904293841928,0.435050081742686,0.511359764496605,0.178064071293475,16.5284915360978,21.1409074101617,12.888883961953,26.8068119267207,0,0,0,0,0,0,0,0,0,3.79655309662471,4.76575484809562,0.511795582622668,1.71175595213568,0,0,1.43897966066652,1.64722217841633,1.17812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01455188481352,4.3375289733965,0.563391205064483,4.01551786171344,12.0846320446139,2.49669736036875,0,0,0,0,0,10.6806545125318,4.02181365321472,0,1.7887322147588,4.73555909938353,10.1082885400575,17.2937759879304,21.1345528190403,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0231488364082,26.4298565941048,20.5797670406485,0,0,1.66963057534359,0,0,2.98871982376605,0,0,0,0,0,0.179736702294654,0,0,0.493217028184668,0,0,0,0,0,0,0,4.34999745260876,4.77932482799099,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,47.1252255661679,5.61736887077719,0,0,2.60297168788339,0,19.778071903379,2.47313502185028,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,1.22206028986725,0,0.370691816839509,0.730953646538188,0,0,0,0,0.391329237864179,0,0,0,0,0.189559738885464,1.65355761355942,4.04383946449264,0,0,0,0,0,0,0.173559738335131,19.8924566751187,3.65648667637691,0.698906672968121,3.0957485844891,0,0,0,26.3810124848501,0,3.61569185248852,0,0,0,0.391102765469606,0,0,3.79638258206047,0,4.12331746197296,0.343189995723929,0,0,5.65665683080309,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0,2.08268764708851,0,0,0,0,0,1.67326718575073,0,0,0,0.160753148465019,0.137539436597234,0,0.674921674654501,13.1546332274851,0.0607495566580247,34.8852075103237,0,0.157363764404994,7.70882456591667,0,4.60596473566669,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0.414239055347196,0,0,0,12.1284838976335,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.899606224327209,0.621051827505038,2.48823724704513,0.53168342911599,2.08698024724694,3.30566739793881,1.90402606084398,0,0,1.50374779859484,0,1.59238355479446,0,0,0,0,0,13.2953786652454,3.39292579554775,1.13352962756136,1.15761237161917,0,0.179088841081487,0,6.35923743778251,2.8270263351341,3.66536672714738,0,0,5.18145512596798,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,15.5266253568583,15.5519315008243,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,16.9795553006774,0.825788063434183,13.9405734876476,7.16259130132097,0,0,0,0.376051641746286,0,0,0,7.36973628795435,0,0,0,0,0,0,0.548257766857182,2.97726707033577,0,3.19406069098988,0,0,0,0,6.38657065171,0,0,0,0,0.118193840883968,5.11664448703518,2.27629969266491,0,10.0897978792964,1.82631744101899,0,0.9555033757741,0.0714765441766563,0,0,0,0,24.2442912070753,50.8741061739971,37.328021737961,0,0,0,0,4.81124423942505,0,0,0,0,0,0,0.205325613712494,0,26.2283936251935,0,0,0,1.92008339466232,0,0,0,0,0,0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| ||
|short_description=p2@DSC3 | |short_description=p2@DSC3 | ||
}} | }} |
Latest revision as of 04:27, 19 September 2015
Short description: | p2@DSC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DSC3_5end |
Coexpression cluster: | C748_amniotic_keratoacanthoma_salivary_Keratinocyte_maxillary_Corneal_esophagus |
Association with transcript: | 29bp_to_ENST00000360428, ENST00000434452, NM_001941, NM_024423, uc002kwi.3, uc002kwj.3_5end |
EntrezGene: | DSC3 |
HGNC: | 3037 |
UniProt: | Q14574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.32e-15 | 42 |
epithelial cell | 9.66e-15 | 253 |
extraembryonic cell | 1.73e-13 | 19 |
squamous epithelial cell | 2.13e-11 | 63 |
epithelial cell of alimentary canal | 1.96e-10 | 20 |
endodermal cell | 5.42e-10 | 58 |
general ecto-epithelial cell | 2.01e-09 | 14 |
acinar cell | 1.06e-08 | 5 |
respiratory epithelial cell | 1.69e-07 | 13 |
protein secreting cell | 4.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.87e-16 | 160 |
endoderm | 8.87e-16 | 160 |
presumptive endoderm | 8.87e-16 | 160 |
extraembryonic membrane | 1.71e-13 | 14 |
membranous layer | 1.71e-13 | 14 |
extraembryonic structure | 4.66e-13 | 24 |
anterior region of body | 2.24e-10 | 62 |
craniocervical region | 2.24e-10 | 62 |
respiratory system | 9.93e-10 | 74 |
chorion | 1.13e-09 | 7 |
head | 9.73e-09 | 56 |
pharyngeal arch system | 1.42e-08 | 18 |
transitional epithelium | 2.29e-08 | 6 |
digestive system | 3.77e-08 | 145 |
digestive tract | 3.77e-08 | 145 |
primitive gut | 3.77e-08 | 145 |
oral opening | 5.71e-08 | 22 |
orifice | 6.98e-08 | 36 |
urothelium | 3.15e-07 | 5 |
respiratory tract | 3.80e-07 | 54 |
subdivision of head | 7.03e-07 | 49 |
pharynx | 7.39e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.27e-10 | 14 |