FFCP PHASE1:Hg19::chr2:99797636..99797686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51263 | |EntrezGene=51263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14036 | |HGNC=14036 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZV5 | |UniProt=B8ZZV5 | ||
|association_with_transcript=0bp_to_ENST00000409145,ENST00000465432_5end | |association_with_transcript=0bp_to_ENST00000409145,ENST00000465432_5end | ||
|cluster_id=chr2:99797636..99797686,+ | |||
|description=CAGE_peak_1_at_MRPL30_5end | |description=CAGE_peak_1_at_MRPL30_5end | ||
|id=chr2:99797636..99797686,+ | |id=chr2:99797636..99797686,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.50e-23!235;DOID:14566!1.46e-21!239;DOID:0050687!2.91e-17!143;DOID:305!3.86e-12!106;DOID:3095!1.06e-08!22;DOID:2994!1.06e-08!22;DOID:171!1.43e-07!10;DOID:0050686!3.57e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.20e-08;22!DOID:2994;1.20e-08;22!DOID:171;1.38e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.50e-23,235;DOID:14566,1.46e-21,239;DOID:0050687,2.91e-17,143;DOID:305,3.86e-12,106;DOID:3095,1.06e-08,22;DOID:2994,1.06e-08,22;DOID:171,1.43e-07,10;DOID:0050686,3.57e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.21e-10!94;UBERON:0001016!1.21e-10!94;UBERON:0001017!3.38e-10!82;UBERON:0005743!8.91e-10!86;UBERON:0000955!7.16e-09!69;UBERON:0006238!7.16e-09!69;UBERON:0001049!4.39e-08!57;UBERON:0005068!4.39e-08!57;UBERON:0006241!4.39e-08!57;UBERON:0007135!4.39e-08!57;UBERON:0000153!8.73e-08!129;UBERON:0007811!8.73e-08!129;UBERON:0002616!9.94e-08!59;UBERON:0000924!1.10e-07!173;UBERON:0006601!1.10e-07!173;UBERON:0000033!1.11e-07!123;UBERON:0002346!1.50e-07!90;UBERON:0002780!3.33e-07!41;UBERON:0001890!3.33e-07!41;UBERON:0006240!3.33e-07!41;UBERON:0003080!7.81e-07!42 | |ontology_enrichment_uberon=UBERON:0000073!1.21e-10!94;UBERON:0001016!1.21e-10!94;UBERON:0001017!3.38e-10!82;UBERON:0005743!8.91e-10!86;UBERON:0000955!7.16e-09!69;UBERON:0006238!7.16e-09!69;UBERON:0001049!4.39e-08!57;UBERON:0005068!4.39e-08!57;UBERON:0006241!4.39e-08!57;UBERON:0007135!4.39e-08!57;UBERON:0000153!8.73e-08!129;UBERON:0007811!8.73e-08!129;UBERON:0002616!9.94e-08!59;UBERON:0000924!1.10e-07!173;UBERON:0006601!1.10e-07!173;UBERON:0000033!1.11e-07!123;UBERON:0002346!1.50e-07!90;UBERON:0002780!3.33e-07!41;UBERON:0001890!3.33e-07!41;UBERON:0006240!3.33e-07!41;UBERON:0003080!7.81e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,8.15e-13,223;UBERON:0001016,2.22e-11,89;UBERON:0001017,1.61e-10,81;UBERON:0000955,3.40e-09,68;UBERON:0006238,3.40e-09,68;UBERON:0001049,1.98e-08,56;UBERON:0005068,1.98e-08,56;UBERON:0006241,1.98e-08,56;UBERON:0007135,1.98e-08,56;UBERON:0002346,3.82e-08,86;UBERON:0004121,4.13e-08,171;UBERON:0000924,4.13e-08,171;UBERON:0006601,4.13e-08,171;UBERON:0000073,5.22e-08,53;UBERON:0002616,5.22e-08,53;UBERON:0002780,3.33e-07,41;UBERON:0001890,3.33e-07,41;UBERON:0003080,3.33e-07,41;UBERON:0006240,3.33e-07,41 | |||
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|short_description=p1@MRPL30 | |short_description=p1@MRPL30 | ||
}} | }} |
Latest revision as of 04:32, 19 September 2015
Short description: | p1@MRPL30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409145, ENST00000465432_5end |
EntrezGene: | MRPL30 |
HGNC: | 14036 |
UniProt: | B8ZZV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 8.15e-13 | 223 |
nervous system | 2.22e-11 | 89 |
central nervous system | 1.61e-10 | 81 |
brain | 3.40e-09 | 68 |
future brain | 3.40e-09 | 68 |
neural tube | 1.98e-08 | 56 |
neural rod | 1.98e-08 | 56 |
future spinal cord | 1.98e-08 | 56 |
neural keel | 1.98e-08 | 56 |
neurectoderm | 3.82e-08 | 86 |
ectoderm-derived structure | 4.13e-08 | 171 |
ectoderm | 4.13e-08 | 171 |
presumptive ectoderm | 4.13e-08 | 171 |
regional part of nervous system | 5.22e-08 | 53 |
regional part of brain | 5.22e-08 | 53 |
regional part of forebrain | 3.33e-07 | 41 |
forebrain | 3.33e-07 | 41 |
anterior neural tube | 3.33e-07 | 41 |
future forebrain | 3.33e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.50e-23 | 235 |
disease of cellular proliferation | 1.46e-21 | 239 |
cell type cancer | 2.91e-17 | 143 |
carcinoma | 3.86e-12 | 106 |
germ cell and embryonal cancer | 1.06e-08 | 22 |
germ cell cancer | 1.06e-08 | 22 |
neuroectodermal tumor | 1.43e-07 | 10 |
organ system cancer | 3.57e-07 | 137 |