FFCP PHASE1:Hg19::chr22:20792089..20792119,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19869 | |||
|TSSclassifier=strong | |||
|UniProt=Q96GP6,E5RFB8 | |||
|association_with_transcript=0bp_to_ENST00000341328,ENST00000405555_5end | |||
|cluster_id=chr22:20792089..20792119,- | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_1_at_SCARF2_5end | |||
|id=chr22:20792089..20792119,- | |||
|ontology_enrichment_celltype=CL:0000055!4.74e-52!180;CL:0000057!4.01e-22!75;CL:0000222!4.98e-22!119;CL:0000183!7.12e-19!59;CL:0000680!1.09e-17!57;CL:0000056!1.09e-17!57;CL:0000355!1.09e-17!57;CL:0000187!1.20e-17!54;CL:0000393!6.10e-17!60;CL:0000211!6.10e-17!60;CL:0000192!1.52e-15!42;CL:0000514!1.52e-15!42;CL:0000220!2.16e-15!246;CL:0002321!2.54e-15!248;CL:0000359!1.33e-13!32;CL:0002334!3.05e-07!12;CL:0000133!7.47e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.17e-13;32!CL:0000192;7.69e-12;43!CL:0000187;4.86e-10;55!CL:0000057;2.73e-09;73!CL:0000393;4.11e-09;61!CL:0000211;4.11e-09;61!CL:0002334;2.31e-07;12!CL:0002320;4.44e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.76e-23,121;CL:0000057,1.13e-22,76;CL:0000680,2.32e-18,58;CL:0000056,2.32e-18,58;CL:0000355,2.32e-18,58;CL:0000187,2.57e-18,55;CL:0000393,1.35e-17,61;CL:0000211,1.35e-17,61;CL:0000192,3.78e-16,43;CL:0000514,3.78e-16,43;CL:0002321,9.36e-15,250;CL:0000359,6.56e-14,32;CL:0002334,2.19e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;7.69e-12;43!CL:0000355;4.94e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.60e-20!84;UBERON:0004290!4.43e-19!70;UBERON:0000914!7.15e-19!83;UBERON:0002329!7.15e-19!83;UBERON:0003077!7.15e-19!83;UBERON:0003059!7.15e-19!83;UBERON:0007282!7.15e-19!83;UBERON:0009618!7.15e-19!83;UBERON:0007285!7.15e-19!83;UBERON:0005256!1.23e-18!143;UBERON:0002049!7.17e-18!79;UBERON:0007798!7.17e-18!79;UBERON:0001134!9.55e-18!61;UBERON:0002036!9.55e-18!61;UBERON:0003082!9.55e-18!61;UBERON:0002385!1.58e-17!63;UBERON:0001015!1.58e-17!63;UBERON:0000383!1.58e-17!63;UBERON:0001981!8.39e-17!60;UBERON:0007500!8.39e-17!60;UBERON:0004537!8.39e-17!60;UBERON:0006965!8.39e-17!60;UBERON:0003914!1.08e-16!118;UBERON:0000486!2.25e-16!82;UBERON:0001637!1.04e-15!42;UBERON:0003509!1.04e-15!42;UBERON:0004572!1.04e-15!42;UBERON:0000055!2.92e-15!69;UBERON:0000475!5.28e-15!365;UBERON:0002100!5.73e-15!216;UBERON:0000490!1.69e-14!138;UBERON:0004573!5.36e-13!33;UBERON:0004571!5.36e-13!33;UBERON:0000119!5.71e-13!312;UBERON:0004535!1.42e-12!110;UBERON:0000483!1.51e-12!309;UBERON:0001009!1.89e-12!113;UBERON:0000481!2.35e-09!347;UBERON:0003104!7.44e-09!238;UBERON:0009142!7.44e-09!238;UBERON:0000468!9.92e-09!659;UBERON:0000477!1.17e-07!286;UBERON:0000025!2.03e-07!194;UBERON:0000947!3.67e-07!21;UBERON:0010191!3.67e-07!21;UBERON:0004111!3.86e-07!241;UBERON:0000948!6.39e-07!24;UBERON:0005498!6.39e-07!24;UBERON:0004140!6.39e-07!24;UBERON:0009881!6.39e-07!24;UBERON:0004141!6.39e-07!24;UBERON:0003084!6.39e-07!24;UBERON:0007005!6.39e-07!24;UBERON:0004139!6.39e-07!24;UBERON:0004291!6.39e-07!24;UBERON:0002199!6.59e-07!45;UBERON:0002416!6.59e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.81e-12;33!UBERON:0004571;4.81e-12;33!UBERON:0001637;9.12e-12;42!UBERON:0003509;9.12e-12;42!UBERON:0004572;9.12e-12;42!UBERON:0007500;3.98e-09;56!UBERON:0001981;3.98e-09;56!UBERON:0004537;3.98e-09;56!UBERON:0000947;2.66e-07;21!UBERON:0010191;2.66e-07;21!UBERON:0000055;2.76e-07;65!UBERON:0002049;2.79e-07;75!UBERON:0007798;2.79e-07;75!UBERON:0002384;4.08e-07;198!UBERON:0003914;4.11e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.58e-21,160;UBERON:0009142,3.58e-21,160;UBERON:0004872,1.69e-20,83;UBERON:0007503,2.99e-20,78;UBERON:0007524,5.62e-20,73;UBERON:0002329,8.53e-20,71;UBERON:0003059,8.53e-20,71;UBERON:0007282,8.53e-20,71;UBERON:0004290,8.53e-20,71;UBERON:0009618,8.53e-20,71;UBERON:0003077,2.00e-19,72;UBERON:0007285,2.00e-19,72;UBERON:0001134,2.01e-18,62;UBERON:0002036,2.01e-18,62;UBERON:0003082,2.01e-18,62;UBERON:0002385,3.37e-18,64;UBERON:0001015,3.37e-18,64;UBERON:0000383,3.37e-18,64;UBERON:0005256,5.80e-18,122;UBERON:0002049,9.68e-18,78;UBERON:0007798,9.68e-18,78;UBERON:0000486,5.54e-17,83;UBERON:0003914,1.19e-16,117;UBERON:0007500,1.27e-16,59;UBERON:0001981,1.27e-16,59;UBERON:0004537,1.27e-16,59;UBERON:0006965,1.27e-16,59;UBERON:0001637,4.55e-16,42;UBERON:0003509,4.55e-16,42;UBERON:0004572,4.55e-16,42;UBERON:0000490,6.36e-16,148;UBERON:0000055,3.92e-15,68;UBERON:0002100,1.09e-13,199;UBERON:0004573,2.75e-13,33;UBERON:0004571,2.75e-13,33;UBERON:0004535,4.97e-13,109;UBERON:0001009,6.74e-13,112;UBERON:0000119,6.49e-11,309;UBERON:0000483,1.61e-10,306;UBERON:0000947,2.64e-07,21;UBERON:0010191,2.64e-07,21;UBERON:0000948,4.67e-07,24;UBERON:0005498,4.67e-07,24;UBERON:0004140,4.67e-07,24;UBERON:0009881,4.67e-07,24;UBERON:0004141,4.67e-07,24;UBERON:0003084,4.67e-07,24;UBERON:0007005,4.67e-07,24;UBERON:0004139,4.67e-07,24;UBERON:0004291,4.67e-07,24 | |||
|phase1_expression=131.898503350424,99.9849446570891,136.020999952612,134.098219793195,89.3922188854576,154.403918765765,81.0559610138594,18.3198763293781,13.3204670381918,10.5665592695649,12.5604210235037,6.99012390816551,11.078213085595,15.5945604729659,15.575676659212,15.4634783683908,19.2862248967673,18.2577522596843,24.8845727383159,18.4681587115182,37.9441285714311,42.943296842498,11.7356754723733,15.8774333084546,23.7275588834177,0,0,0,0,0,0.77408061658038,0,1.50602959389125,2.9580320813343,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8852359365131,24.8159318090345,29.1526641003249,28.9151321907653,41.1097086721429,54.3174446103089,10.3387173116643,43.3105034569346,6.80650683581289,12.6385756553661,16.1616005675352,9.36500389808645,0,0,0,0.174129737299267,0,0,0,0,10.5344075904354,28.3877416385021,9.71993404501264,20.9163938511884,31.4624577157429,23.1099155229657,12.3307030256718,1.8089173141853,1.77883131343355,1.67360306382335,8.05658634218294,11.4040815857777,30.5077571935212,3.67663080345869,25.1144003843345,5.17938424047663,4.4905874525234,6.75668882899933,24.5306619945413,22.7823758296351,13.7401307947805,0,0,1.74437620857014,44.7274756525787,29.2516481945179,29.5272473213478,83.7562932586536,35.4668382198357,30.8372680078269,46.9695581210702,69.3135811052219,18.3614510885862,24.6520529887529,23.3750521452246,23.1576864296745,35.1467313932799,27.649928956388,9.67696238173994,7.98660550162229,19.5777771522859,13.2700983467454,15.3779297149725,16.1518427707586,6.73708765141148,15.9684612505298,14.6722609269587,41.5801000048719,44.2607803408617,14.5625817910084,74.7362867488888,7.74346124188705,17.516592782075,4.15596173226274,31.1674110825395,34.9396087210882,37.259038608836,22.6864366320042,73.1909713610557,23.0641979924053,16.9545520927649,83.4253247114638,15.1487217980505,47.1482188283501,37.4094881226496,76.6244548375349,44.0415263328618,39.8845363305701,26.7865205049091,14.3864990568743,127.803453305981,31.5354067452514,41.71190570838,0,0.272746120590835,0,4.87894824518382,4.24095258628753,5.34492137199785,3.62813692553797,4.03713361401005,3.28479623168247,18.7739438795779,72.686226015796,42.821825619269,46.4367928031979,22.3782639317572,0,0,0,0,0,0,0,0,0,6.64339909162183,43.4749498790682,32.925920906512,82.3248783759035,0,1.96565443335525,5.31710916013264,0,0.614942192715568,9.43622956641891,0.219500570817251,0,0.100528972411631,1.66659201285353,33.2324471416531,32.2379783436669,15.8764476227801,6.02838105870399,9.62751292733738,7.07395594029262,10.648666789262,4.37584550139576,0,0,0,0,0,0,1.84780341018745,0.850650583454319,0.53735113621709,0,1.15014803749563,0,0,1.4512968087854,0.432359860250884,0.6312121671319,13.0805662241868,43.1646920880854,35.1652341630141,58.1646316477198,50.5911264100352,41.4473419824606,20.5795031494016,17.716711326567,14.3866822714982,19.6546606000146,32.3179289394444,214.593867511129,29.58559633946,34.3060170394483,40.5629003954328,19.5477604439228,29.7883177248884,26.3757957225938,42.607442110128,57.517890171493,37.8690554919154,17.5897539518617,36.2499787717397,19.7987968233357,20.1964382629923,19.1737360892065,32.9910870900788,0,0,0,26.5983589595657,26.4182452418462,11.4109524032575,23.3097903734803,13.5614372883253,6.62525563987614,0,0,0,0.128343036279748,17.024339822905,2.60279707715243,14.6924874427762,5.36052049069916,12.1208362814101,0,0,0,29.4459580125936,46.0156879374903,21.1586718485794,48.2492398751473,50.4954038295968,35.9561506277371,45.5680104321654,27.0851489754947,95.5111517035136,81.7437263210789,24.5763471458112,41.4830629218832,15.0308653029783,39.9434361223991,48.3832227573307,0,0,0,26.0689711443783,23.3009615314696,40.2179090128475,104.453387091705,93.7652656790062,160.256913921285,93.1571615088946,95.6892555754736,109.70237421994,149.902247109441,26.8324867216621,30.1854933032316,12.9760906501818,32.7130290385681,29.5174361288296,1.32945394550784,2.6065841139427,2.02578175658972,27.8999109039994,36.4182336013434,53.2365124735262,9.02399225814824,6.93138033939733,22.7461433061288,20.4594914514565,8.65523356921581,4.54933536283586,2.89159298970077,11.2276276373112,29.303178011155,21.4047685659644,37.626733039114,3.56826782263054,3.3243040357149,7.61174166055406,0,0,7.1806035032589,18.0408055134838,16.9196765225438,8.24328093181778,36.7193553921557,35.3140659660117,9.18824860793876,2.60024098414608,25.7094287750655,36.44486079613,10.7834031980251,16.7319005451481,18.7457738578962,13.2126901187977,21.6074873932201,16.7896456009719,27.7779951217821,3.63626813794152,8.45636296406467,5.6149593497617,0.910420027699949,18.1289764225941,121.517565876627,48.0955716410814,89.9458054114179,48.972154789166,45.2365155879038,46.5163789950839,18.0337357294909,22.32950216158,9.17500331684305,33.1696537427455,30.1959393747374,23.9645833298995,39.7754059907421,61.22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| |||
|short_description=p1@SCARF2 | |||
}} |
Latest revision as of 04:51, 19 September 2015
Short description: | p1@SCARF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARF2_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000341328, ENST00000405555_5end |
EntrezGene: | SCARF2 |
HGNC: | 19869 |
UniProt: | Q96GP6E5RFB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.76e-23 | 121 |
fibroblast | 1.13e-22 | 76 |
muscle precursor cell | 2.32e-18 | 58 |
myoblast | 2.32e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.32e-18 | 58 |
muscle cell | 2.57e-18 | 55 |
electrically responsive cell | 1.35e-17 | 61 |
electrically active cell | 1.35e-17 | 61 |
smooth muscle cell | 3.78e-16 | 43 |
smooth muscle myoblast | 3.78e-16 | 43 |
embryonic cell | 9.36e-15 | 250 |
vascular associated smooth muscle cell | 6.56e-14 | 32 |
preadipocyte | 2.19e-07 | 12 |