FFCP PHASE1:Hg19::chr7:6523755..6523829,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:6523755..6523829,-
|short_description=p1@DAGLB,p1@KDELR2
|description=CAGE_peak_1_at_DAGLB_5end,CAGE_peak_1_at_KDELR2_5end
|association_with_transcript=0bp...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11014,221955 | |EntrezGene=11014,221955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6305,28923 | |HGNC=6305,28923 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET49 | |UniProt=E7ET49 | ||
|association_with_transcript=0bp_to_ENST00000382267,ENST00000436575,ENST00000462052,ENST00000463747_5end | |||
|cluster_id=chr7:6523755..6523829,- | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_1_at_DAGLB_5end,CAGE_peak_1_at_KDELR2_5end | |||
|id=chr7:6523755..6523829,- | |||
|ontology_enrichment_celltype=CL:0000055!1.93e-38!180;CL:0000057!7.42e-22!75;CL:0000222!7.27e-21!119;CL:0000548!1.41e-20!679;CL:0000004!1.41e-20!679;CL:0000255!1.41e-20!679;CL:0000183!1.45e-19!59;CL:0000680!1.70e-19!57;CL:0000056!1.70e-19!57;CL:0000355!1.70e-19!57;CL:0000012!2.12e-19!682;CL:0000187!1.03e-18!54;CL:0000220!3.92e-18!246;CL:0002321!1.66e-17!248;CL:0000192!3.64e-17!42;CL:0000514!3.64e-17!42;CL:0000393!7.23e-15!60;CL:0000211!7.23e-15!60;CL:0000144!1.54e-13!625;CL:0000359!6.28e-13!32;CL:0002371!2.56e-12!591;CL:0000003!2.37e-07!722;CL:0000066!6.07e-07!254;CL:0002334!6.66e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.55e-12;43!CL:0000359;3.17e-12;32!CL:0000187;7.68e-11;55!CL:0000057;2.03e-09;73!CL:0000134;2.39e-08;55!CL:0000393;9.57e-08;61!CL:0000211;9.57e-08;61!CL:0002320;2.16e-07;188!CL:0000723;2.85e-07;61!CL:0000048;6.23e-07;58!CL:0002334;6.72e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.73e-22,76;CL:0000222,4.45e-21,121;CL:0000680,1.47e-19,58;CL:0000056,1.47e-19,58;CL:0000355,1.47e-19,58;CL:0000187,8.99e-19,55;CL:0002321,9.21e-18,250;CL:0000192,3.38e-17,43;CL:0000514,3.38e-17,43;CL:0000393,5.82e-15,61;CL:0000211,5.82e-15,61;CL:0000359,6.28e-13,32;CL:0002334,6.66e-07,12;CL:0000066,7.51e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-12;43!CL:0000355;1.83e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.91e-27!143;UBERON:0002100!1.96e-26!216;UBERON:0000914!3.33e-21!83;UBERON:0002329!3.33e-21!83;UBERON:0003077!3.33e-21!83;UBERON:0003059!3.33e-21!83;UBERON:0007282!3.33e-21!83;UBERON:0009618!3.33e-21!83;UBERON:0007285!3.33e-21!83;UBERON:0003104!4.94e-20!238;UBERON:0009142!4.94e-20!238;UBERON:0004290!1.44e-19!70;UBERON:0000490!2.68e-19!138;UBERON:0000486!2.89e-19!82;UBERON:0003914!5.24e-18!118;UBERON:0001134!1.16e-17!61;UBERON:0002036!1.16e-17!61;UBERON:0003082!1.16e-17!61;UBERON:0002385!5.53e-17!63;UBERON:0001015!5.53e-17!63;UBERON:0000383!5.53e-17!63;UBERON:0000475!2.74e-13!365;UBERON:0002049!2.77e-13!79;UBERON:0007798!2.77e-13!79;UBERON:0004872!3.34e-12!84;UBERON:0000926!3.98e-12!448;UBERON:0004120!3.98e-12!448;UBERON:0006603!3.98e-12!448;UBERON:0001637!9.88e-12!42;UBERON:0003509!9.88e-12!42;UBERON:0004572!9.88e-12!42;UBERON:0000055!1.97e-11!69;UBERON:0001981!7.61e-11!60;UBERON:0007500!7.61e-11!60;UBERON:0004537!7.61e-11!60;UBERON:0006965!7.61e-11!60;UBERON:0009569!9.85e-11!113;UBERON:0000481!1.88e-10!347;UBERON:0003102!5.66e-10!95;UBERON:0004573!5.95e-10!33;UBERON:0004571!5.95e-10!33;UBERON:0004535!7.77e-09!110;UBERON:0000468!1.04e-08!659;UBERON:0001009!3.08e-08!113;UBERON:0000119!7.57e-08!312;UBERON:0000466!1.65e-07!126;UBERON:0000483!2.07e-07!309;UBERON:0002199!2.10e-07!45;UBERON:0002416!2.10e-07!45;UBERON:0002417!2.84e-07!61;UBERON:0000916!2.84e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.50e-09;33!UBERON:0004571;5.50e-09;33!UBERON:0001637;2.11e-08;42!UBERON:0003509;2.11e-08;42!UBERON:0004572;2.11e-08;42!UBERON:0002384;1.89e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.26e-25,160;UBERON:0009142,1.26e-25,160;UBERON:0005256,2.78e-25,122;UBERON:0002100,5.05e-25,199;UBERON:0000490,1.70e-21,148;UBERON:0007503,2.85e-21,78;UBERON:0002329,1.18e-19,71;UBERON:0003059,1.18e-19,71;UBERON:0007282,1.18e-19,71;UBERON:0004290,1.18e-19,71;UBERON:0009618,1.18e-19,71;UBERON:0000486,2.27e-19,83;UBERON:0007524,3.32e-19,73;UBERON:0003077,1.06e-18,72;UBERON:0007285,1.06e-18,72;UBERON:0003914,7.01e-18,117;UBERON:0001134,9.57e-18,62;UBERON:0002036,9.57e-18,62;UBERON:0003082,9.57e-18,62;UBERON:0002385,4.51e-17,64;UBERON:0001015,4.51e-17,64;UBERON:0000383,4.51e-17,64;UBERON:0002049,9.06e-13,78;UBERON:0007798,9.06e-13,78;UBERON:0001637,9.88e-12,42;UBERON:0003509,9.88e-12,42;UBERON:0004572,9.88e-12,42;UBERON:0004872,1.02e-11,83;UBERON:0000055,6.25e-11,68;UBERON:0009569,1.61e-10,112;UBERON:0007500,2.47e-10,59;UBERON:0001981,2.47e-10,59;UBERON:0004537,2.47e-10,59;UBERON:0006965,2.47e-10,59;UBERON:0003102,3.97e-10,99;UBERON:0004573,5.95e-10,33;UBERON:0004571,5.95e-10,33;UBERON:0004535,1.88e-08,109;UBERON:0000119,4.17e-08,309;UBERON:0001009,7.20e-08,112;UBERON:0000483,1.16e-07,306;UBERON:0002199,1.26e-07,46;UBERON:0002416,1.26e-07,46;UBERON:0002417,3.65e-07,60;UBERON:0000916,3.65e-07,60 | |||
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| ||
|short_description=p1@DAGLB,p1@KDELR2 | |||
}} | }} |
Latest revision as of 05:37, 19 September 2015
Short description: | p1@DAGLB, p1@KDELR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DAGLB_5end, CAGE_peak_1_at_KDELR2_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000382267, ENST00000436575, ENST00000462052, ENST00000463747_5end |
EntrezGene: | 11014,221955 |
HGNC: | 28923&submit=Submit 6305, 28923 |
UniProt: | E7ET49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.73e-22 | 76 |
mesodermal cell | 4.45e-21 | 121 |
muscle precursor cell | 1.47e-19 | 58 |
myoblast | 1.47e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.47e-19 | 58 |
muscle cell | 8.99e-19 | 55 |
embryonic cell | 9.21e-18 | 250 |
smooth muscle cell | 3.38e-17 | 43 |
smooth muscle myoblast | 3.38e-17 | 43 |
electrically responsive cell | 5.82e-15 | 61 |
electrically active cell | 5.82e-15 | 61 |
vascular associated smooth muscle cell | 6.28e-13 | 32 |
preadipocyte | 6.66e-07 | 12 |
epithelial cell | 7.51e-07 | 253 |