FFCP PHASE1:Hg19::chr15:78632686..78632701,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:78632686..78632701,+ to FFCP PHASE1:Hg19::chr15:78632686..78632701,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1381 | |EntrezGene=1381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2338 | |HGNC=2338 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0F7,P29762 | |UniProt=F1T0F7,P29762 | ||
|association_with_transcript=20bp_to_ENST00000299529,NM_004378,uc002bdp.2_5end | |||
|cluster_id=chr15:78632686..78632701,+ | |||
|description=CAGE_peak_1_at_CRABP1_5end | |||
|id=chr15:78632686..78632701,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.80e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.19e-07;6!CL:0000404;1.19e-07;6!CL:0002322;1.22e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.21e-07,6;CL:0000031,1.21e-07,6;CL:0000404,1.21e-07,6;CL:0002322,1.23e-07,5;CL:0000047,7.11e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.90e-11;82!CL:0000031;1.19e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!3.85e-10!22;DOID:2994!3.85e-10!22;DOID:171!7.00e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.99e-07;22!DOID:2994;2.99e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.00e-07,22;DOID:2994,3.00e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.28e-38!94;UBERON:0001016!1.28e-38!94;UBERON:0005743!1.77e-37!86;UBERON:0001017!8.12e-36!82;UBERON:0007023!1.53e-32!115;UBERON:0002346!1.89e-32!90;UBERON:0003075!4.74e-30!86;UBERON:0007284!4.74e-30!86;UBERON:0001049!1.45e-29!57;UBERON:0005068!1.45e-29!57;UBERON:0006241!1.45e-29!57;UBERON:0007135!1.45e-29!57;UBERON:0002616!1.39e-27!59;UBERON:0000924!1.06e-26!173;UBERON:0006601!1.06e-26!173;UBERON:0000955!1.17e-26!69;UBERON:0006238!1.17e-26!69;UBERON:0004121!1.11e-24!169;UBERON:0002780!1.18e-21!41;UBERON:0001890!1.18e-21!41;UBERON:0006240!1.18e-21!41;UBERON:0003056!2.29e-21!61;UBERON:0000153!7.69e-21!129;UBERON:0007811!7.69e-21!129;UBERON:0003080!8.87e-21!42;UBERON:0000033!7.40e-20!123;UBERON:0002020!5.00e-18!34;UBERON:0003528!5.00e-18!34;UBERON:0001893!9.34e-18!34;UBERON:0002791!4.88e-17!33;UBERON:0001869!9.37e-17!32;UBERON:0002619!1.02e-13!22;UBERON:0001950!5.91e-13!20;UBERON:0000956!5.50e-12!25;UBERON:0000203!5.50e-12!25;UBERON:0003076!5.92e-10!15;UBERON:0003057!5.92e-10!15;UBERON:0004732!3.61e-08!13;UBERON:0004733!7.14e-08!12;UBERON:0002028!7.14e-08!12;UBERON:0007277!7.14e-08!12;UBERON:0002308!8.86e-08!9;UBERON:0000125!8.86e-08!9;UBERON:0000922!1.09e-07!612;UBERON:0002420!3.44e-07!9;UBERON:0007245!3.44e-07!9;UBERON:0010009!3.44e-07!9;UBERON:0010011!3.44e-07!9;UBERON:0000454!3.44e-07!9;UBERON:0000064!4.59e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.19e-18;53!UBERON:0002616;7.19e-18;53!UBERON:0001893;1.78e-17;34!UBERON:0003528;2.04e-17;34!UBERON:0002020;2.04e-17;34!UBERON:0002780;2.29e-17;41!UBERON:0001890;2.29e-17;41!UBERON:0001869;5.92e-17;32!UBERON:0002791;1.00e-16;32!UBERON:0002619;1.10e-15;22!UBERON:0001950;1.14e-14;20!UBERON:0001017;2.45e-14;75!UBERON:0000922;4.80e-14;49!UBERON:0001016;1.33e-13;83!UBERON:0000955;1.80e-13;68!UBERON:0000956;4.48e-13;25!UBERON:0000203;4.48e-13;25!UBERON:0000125;1.58e-09;9!UBERON:0002308;1.58e-09;9!UBERON:0007023;1.99e-09;114!UBERON:0004732;7.36e-09;13!UBERON:0002420;8.69e-09;9!UBERON:0007245;8.69e-09;9!UBERON:0010009;8.69e-09;9!UBERON:0010011;8.69e-09;9!UBERON:0000454;8.69e-09;9!UBERON:0004733;1.87e-08;12!UBERON:0002028;1.87e-08;12!UBERON:0002298;9.18e-08;6!UBERON:0009663;2.11e-07;7!UBERON:0011216;2.92e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.19e-41,89;UBERON:0001017,5.32e-40,81;UBERON:0001049,5.65e-34,56;UBERON:0005068,5.65e-34,56;UBERON:0006241,5.65e-34,56;UBERON:0007135,5.65e-34,56;UBERON:0002346,5.15e-33,86;UBERON:0000073,2.95e-31,53;UBERON:0002616,2.95e-31,53;UBERON:0003075,4.19e-31,82;UBERON:0007284,4.19e-31,82;UBERON:0000955,1.01e-29,68;UBERON:0006238,1.01e-29,68;UBERON:0007023,6.34e-29,114;UBERON:0004121,3.76e-27,171;UBERON:0000924,3.76e-27,171;UBERON:0006601,3.76e-27,171;UBERON:0011216,1.36e-25,223;UBERON:0010371,1.05e-24,104;UBERON:0002780,5.72e-24,41;UBERON:0001890,5.72e-24,41;UBERON:0003080,5.72e-24,41;UBERON:0006240,5.72e-24,41;UBERON:0003056,8.42e-22,61;UBERON:0003528,1.27e-20,34;UBERON:0002020,1.27e-20,34;UBERON:0001893,2.71e-20,34;UBERON:0001869,5.03e-19,32;UBERON:0002791,1.27e-18,32;UBERON:0010314,1.91e-18,132;UBERON:0002619,1.05e-15,22;UBERON:0001950,1.02e-14,20;UBERON:0000956,4.30e-13,25;UBERON:0000203,4.30e-13,25;UBERON:0003076,4.50e-11,15;UBERON:0003057,4.50e-11,15;UBERON:0000125,1.75e-09,9;UBERON:0002308,1.75e-09,9;UBERON:0004732,7.31e-09,13;UBERON:0002420,9.80e-09,9;UBERON:0007245,9.80e-09,9;UBERON:0010009,9.80e-09,9;UBERON:0010011,9.80e-09,9;UBERON:0000454,9.80e-09,9;UBERON:0000922,1.50e-08,592;UBERON:0004733,1.81e-08,12;UBERON:0002028,1.81e-08,12;UBERON:0007277,1.81e-08,12;UBERON:0002298,9.14e-08,6;UBERON:0009663,2.34e-07,7;UBERON:0005409,7.24e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,19.3300061180557,0.816002764977012,6.58254915103984,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56278537312543,4.21285855178871,2.45937399940753,6.94189100137877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9248833433337,19.58998143232,1.64025002283658,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.503760491138201,0.508681776931463,0,0,0,239.312411426266,210.457272094519,552.153616515951,908.900130374768,359.052570796019,325.194826936564,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,56.8206586069185,2.05881372358231,0,0,0,0,0.325808305310325,0,0,624.285230790789,0.117408694235822,0,0,0,67.9575782244977,86.7071023715821,0,0,0,0,0,0,0,0,0,3.4486426652716,0.088048434013226,2.69526550203004,0.432359860250884,2.27236380167484,0.126995788584338,0,0,0,0.308482478109971,0,0,1.79409734952577,4.79556075716608,2.4935017179123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,11.5993321916654,38.0261922308972,8.29320377149112,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,77.1456560403198,62.4521031335758,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.581051892299796,92.457478937591,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,1.28225062558195,0.328014645699706,0.325378394664303,1.03041011647722,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0.255679882248303,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,4.09374206295634,0,0,0,0,7.00047145437061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,11.1502107847928,0,0,0,0,0,0,0,0,0.329294892959902,0,1.39973888097993,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,1.41259795033733,37.4744689167487,0,35.3326878954727,44.7352215784832,41.3785871445533,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0,0,14.9122147164945,3.23539657744179,0,0,9.50064336575971,3.18796781201712,6.07824614168525,0.755798243562828,0.306806047506464,0,0,0,1.61119057208048,0,1.38100767891707,0,0,22.29465316019,24.2124736202432,17.9652418201075,3.64598865519327,0,0,0,0,17.0199130872914,210.638201050535,4.95727842751532,22.2239993514614,31.0009485034844,37.2642995352511,0,7.85112745511695,9.16197618755997,105.085605236753,0,0,0.769502585037971,0,0.23056390438806,0.0897576444097721,0,0,0,0,3.06579894587209,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,95.1306170750422,3.89499551535764,4.97630965539252,1.50377859655677,10.3875124638716,0,0.370691816839509,0.208843899010911,10.2449722130629,1.60515529459758,42.4018646762864,0,3.7176277597097,0,1.57833761139756,6.04953580243319,69.1724441284908,83.2167253707186,1.65355761355942,0.622129148383483,0,0,0.313932918407225,0,0,0,1.56203764501618,0,0,6.29016005671309,0,0,0,0,0.678923115418936,0,490.830168975316,0,0,20.0695223180135,4.88878456837007,0,1.49417096317547,0.599428828746391,9.50996753217099,0,0,0,0,0.471388069233591,0,0,0,0,12.6088260629056,5.20240439789574,1.27746588066972,0,0.262887354279314,3.0721064139948,0,1.43574604915363,0.399358000997982,0,0.223171457441873,2.14987111957524,0,0,0,0,0,0.295282444544246,0,2.38568906942791,2.04305109167363,356.711236443878,251.422090099743,206.889288338534,0.2249738915515,0,9.41618128199382,0,6.30445658393585,20.2474710201093,0,1.07572403599707,0,0,0,0.25426853765475,0,0,0,0,7.14204930519249,0,0,0,0,93.8594263184857,54.3475993162456,2.9084762440336,0,0.427149650270779,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0.886068179966986,2.44052529803926,5.00763722825999,13.7618206965617,33.8333607187399,86.6244821032299,2.21357815897969,0,0,0.856396000634902,0,118.488731169141,80.2862498503971,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,1.56596575179127,0,0,0,0,29.6449389274533,0,0,0,0,0,0,0,2.35039341457942,1.16916185303633,0.265729680626726,1.14495775979091,0,4.91545817507439,0,0,13.4431579414618,0,0,0,0,0,2.55788742607303,607.161512974715,0.786329709279482,4.36838552768056,3.3946505990805,0.637724760305049,144.880908418774,46.3675281917792,0,0,0.80057074828547,4.58478726797889,0,31.2154033968793,1.41696576325585,3.83121261737163,2.87162909937057,6.55386410176467,33.6104246976099,13.8869055243392,1.42769420259154,0,3.30315225373673,0,0,0,6.21323933454091,0.198916222116275,0.752103283492572,0.20170506870352,0.781514011233092,0,0,0,26.2721204165555,3.90539049306924,4.96048311602842,14.1417256732412,18.5971435066195,0.548257766857182,5.9545341406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| ||
|short_description=p1@CRABP1 | |||
}} | }} |
Latest revision as of 06:52, 19 September 2015
Short description: | p1@CRABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRABP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000299529, NM_004378, uc002bdp.2_5end |
EntrezGene: | CRABP1 |
HGNC: | 2338 |
UniProt: | F1T0F7P29762 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.21e-07 | 6 |
neuroblast | 1.21e-07 | 6 |
electrically signaling cell | 1.21e-07 | 6 |
embryonic stem cell | 1.23e-07 | 5 |
neuronal stem cell | 7.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.00e-07 | 22 |
germ cell cancer | 3.00e-07 | 22 |