FFCP PHASE1:Hg19::chr14:23299088..23299114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122704 | |EntrezGene=122704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16655 | |HGNC=16655 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TS9,G3XCN9,G5E9P5,A6NMQ8,A8MXK5 | |UniProt=Q86TS9,G3XCN9,G5E9P5,A6NMQ8,A8MXK5 | ||
|association_with_transcript=0bp_to_ENST00000355151,ENST00000397496,ENST00000432849,ENST00000553482,ENST00000553711,ENST00000555345,ENST00000556214,ENST00000556654,ENST00000557543,NM_178336,NM_180982,NM_181304,NM_181305,NM_181306,NM_181307,uc001wgw.3,uc001wgx.3,uc001wgy.3,uc001wgz.3,uc001wha.3,uc001whb.3_5end | |association_with_transcript=0bp_to_ENST00000355151,ENST00000397496,ENST00000432849,ENST00000553482,ENST00000553711,ENST00000555345,ENST00000556214,ENST00000556654,ENST00000557543,NM_178336,NM_180982,NM_181304,NM_181305,NM_181306,NM_181307,uc001wgw.3,uc001wgx.3,uc001wgy.3,uc001wgz.3,uc001wha.3,uc001whb.3_5end | ||
|cluster_id=chr14:23299088..23299114,+ | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_1_at_MRPL52_5end | |description=CAGE_peak_1_at_MRPL52_5end | ||
|id=chr14:23299088..23299114,+ | |id=chr14:23299088..23299114,+ | ||
|ontology_enrichment_celltype=CL:0000220!5.09e-22!246;CL:0002321!1.21e-21!248;CL:0000222!1.43e-16!119;CL:0000183!1.30e-13!59;CL:0000393!3.18e-13!60;CL:0000211!3.18e-13!60;CL:0000548!2.32e-12!679;CL:0000004!2.32e-12!679;CL:0000255!2.32e-12!679;CL:0000066!4.90e-12!254;CL:0000012!5.41e-12!682;CL:0000187!7.07e-12!54;CL:0000680!3.56e-11!57;CL:0000056!3.56e-11!57;CL:0000355!3.56e-11!57;CL:0000192!2.12e-10!42;CL:0000514!2.12e-10!42;CL:0000055!2.88e-10!180;CL:0000144!1.33e-08!625;CL:0000359!1.42e-08!32;CL:0002371!3.47e-07!591;CL:1000449!4.29e-07!16;CL:0002078!8.95e-07!44 | |ontology_enrichment_celltype=CL:0000220!5.09e-22!246;CL:0002321!1.21e-21!248;CL:0000222!1.43e-16!119;CL:0000183!1.30e-13!59;CL:0000393!3.18e-13!60;CL:0000211!3.18e-13!60;CL:0000548!2.32e-12!679;CL:0000004!2.32e-12!679;CL:0000255!2.32e-12!679;CL:0000066!4.90e-12!254;CL:0000012!5.41e-12!682;CL:0000187!7.07e-12!54;CL:0000680!3.56e-11!57;CL:0000056!3.56e-11!57;CL:0000355!3.56e-11!57;CL:0000192!2.12e-10!42;CL:0000514!2.12e-10!42;CL:0000055!2.88e-10!180;CL:0000144!1.33e-08!625;CL:0000359!1.42e-08!32;CL:0002371!3.47e-07!591;CL:1000449!4.29e-07!16;CL:0002078!8.95e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.57e-08;32!CL:0000192;4.40e-08;43!CL:0000187;1.71e-07;55!CL:1000449;8.12e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.99e-22,250;CL:0000222,2.30e-17,121;CL:0000393,1.62e-13,61;CL:0000211,1.62e-13,61;CL:0000187,3.64e-12,55;CL:0000066,8.16e-12,253;CL:0000680,1.85e-11,58;CL:0000056,1.85e-11,58;CL:0000355,1.85e-11,58;CL:0000192,1.09e-10,43;CL:0000514,1.09e-10,43;CL:0000359,1.42e-08,32;CL:0002078,3.08e-07,45;CL:0000115,3.96e-07,36;CL:1000449,8.20e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.40e-08;43 | |||
|ontology_enrichment_disease=DOID:14566!3.24e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.05e-17!118;UBERON:0005256!8.32e-16!143;UBERON:0000490!1.00e-14!138;UBERON:0004290!7.95e-14!70;UBERON:0000486!1.29e-13!82;UBERON:0000914!2.31e-13!83;UBERON:0002329!2.31e-13!83;UBERON:0003077!2.31e-13!83;UBERON:0003059!2.31e-13!83;UBERON:0007282!2.31e-13!83;UBERON:0009618!2.31e-13!83;UBERON:0007285!2.31e-13!83;UBERON:0002100!1.92e-12!216;UBERON:0001981!5.31e-12!60;UBERON:0007500!5.31e-12!60;UBERON:0004537!5.31e-12!60;UBERON:0006965!5.31e-12!60;UBERON:0002049!8.22e-12!79;UBERON:0007798!8.22e-12!79;UBERON:0003104!8.44e-12!238;UBERON:0009142!8.44e-12!238;UBERON:0000055!1.61e-11!69;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0004872!2.46e-11!84;UBERON:0001134!2.47e-11!61;UBERON:0002036!2.47e-11!61;UBERON:0003082!2.47e-11!61;UBERON:0002385!3.07e-10!63;UBERON:0001015!3.07e-10!63;UBERON:0000383!3.07e-10!63;UBERON:0004573!1.93e-08!33;UBERON:0004571!1.93e-08!33;UBERON:0000119!1.28e-07!312;UBERON:0000483!1.79e-07!309;UBERON:0000487!2.94e-07!22;UBERON:0000353!3.62e-07!17;UBERON:0001009!4.25e-07!113;UBERON:0004211!4.29e-07!16;UBERON:0001285!4.29e-07!16;UBERON:0007684!4.29e-07!16;UBERON:0003220!4.29e-07!16;UBERON:0004208!4.29e-07!16;UBERON:0004535!6.26e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;5.03e-09;74!UBERON:0001637;3.03e-08;42!UBERON:0003509;3.03e-08;42!UBERON:0004572;3.03e-08;42!UBERON:0004573;1.09e-07;33!UBERON:0004571;1.09e-07;33!UBERON:0007500;2.63e-07;56!UBERON:0001981;2.63e-07;56!UBERON:0004537;2.63e-07;56!UBERON:0000487;2.97e-07;22!UBERON:0006555;8.12e-07;15!UBERON:0004819;8.12e-07;15!UBERON:0001285;8.12e-07;15!UBERON:0007684;8.12e-07;15!UBERON:0000353;9.66e-07;15 | |||
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| ||
|short_description=p1@MRPL52 | |short_description=p1@MRPL52 | ||
}} | }} |
Latest revision as of 07:29, 19 September 2015
Short description: | p1@MRPL52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL52_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000355151, ENST00000397496, ENST00000432849, ENST00000553482, ENST00000553711, ENST00000555345, ENST00000556214, ENST00000556654, ENST00000557543, NM_178336, NM_180982, NM_181304, NM_181305, NM_181306, NM_181307, uc001wgw.3, uc001wgx.3, uc001wgy.3, uc001wgz.3, uc001wha.3, uc001whb.3_5end |
EntrezGene: | MRPL52 |
HGNC: | 16655 |
UniProt: | Q86TS9G3XCN9G5E9P5A6NMQ8A8MXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.99e-22 | 250 |
mesodermal cell | 2.30e-17 | 121 |
electrically responsive cell | 1.62e-13 | 61 |
electrically active cell | 1.62e-13 | 61 |
muscle cell | 3.64e-12 | 55 |
epithelial cell | 8.16e-12 | 253 |
muscle precursor cell | 1.85e-11 | 58 |
myoblast | 1.85e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-11 | 58 |
smooth muscle cell | 1.09e-10 | 43 |
smooth muscle myoblast | 1.09e-10 | 43 |
vascular associated smooth muscle cell | 1.42e-08 | 32 |
meso-epithelial cell | 3.08e-07 | 45 |
endothelial cell | 3.96e-07 | 36 |
epithelial cell of nephron | 8.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.24e-07 | 239 |