FFCP PHASE1:Hg19::chrX:123094746..123094757,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:123094746..123094757,+ to FFCP PHASE1:Hg19::chrX:123094746..123094757,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMS8 | |UniProt=B1AMS8 | ||
|association_with_transcript=32bp_to_ENST00000458700_5end | |||
|cluster_id=chrX:123094746..123094757,+ | |||
|description=CAGE_peak_18_at_STAG2_5end | |||
|id=chrX:123094746..123094757,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.93e-23;1!CL:0000557;2.93e-23;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.88e-08!143;DOID:305!8.84e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.06e-23;1!DOID:4549;1.06e-23;1!DOID:5861;1.06e-23;1!DOID:6496;1.06e-23;1!DOID:201;8.71e-16;6!DOID:0060100;8.71e-16;6!DOID:4231;2.45e-12;2!DOID:3193;2.45e-12;2!DOID:962;2.45e-12;2!DOID:1907;2.45e-12;2!DOID:1115;1.23e-10;20!DOID:1192;1.17e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-23,1;DOID:4549,1.07e-23,1;DOID:5861,1.07e-23,1;DOID:6496,1.07e-23,1;DOID:201,9.74e-16,6;DOID:0060100,9.74e-16,6;DOID:3193,1.65e-12,2;DOID:962,1.65e-12,2;DOID:4231,2.90e-12,2;DOID:1907,2.90e-12,2;DOID:1115,1.15e-10,20;DOID:1192,8.96e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.22e-44;2!UBERON:0005058;1.22e-44;2!UBERON:0009113;1.22e-44;2!UBERON:0004177;1.48e-18;5!UBERON:0005057;1.48e-18;5!UBERON:0003714;2.45e-12;2!UBERON:0002418;8.31e-09;3!UBERON:0004755;8.31e-09;3!UBERON:0002405;5.43e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-23,4;UBERON:0005058,5.14e-23,4;UBERON:0009113,5.14e-23,4;UBERON:0003295,5.14e-23,4;UBERON:0005562,5.14e-23,4;UBERON:0009722,1.32e-18,11;UBERON:0007690,1.32e-18,11;UBERON:0003351,1.05e-15,6;UBERON:0004177,1.31e-13,7;UBERON:0005057,1.31e-13,7;UBERON:0003714,1.65e-12,2;UBERON:0008814,1.19e-11,18;UBERON:0000974,8.09e-10,10;UBERON:0003408,8.09e-10,10;UBERON:0001042,8.09e-10,10;UBERON:0009145,8.09e-10,10;UBERON:0006562,5.20e-09,11;UBERON:0002418,8.31e-09,3;UBERON:0004755,8.31e-09,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.653638332277218,0,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0.76228387266739,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.929015875628594,0,0.355709216742071,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.492339221844278,0,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0.278847488557207,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.593042257361244,0.247127877893006,0.313265848516366,0.134802265961354,0,0,0.547364367646998,0,0.485560759068186,0.394584402849391,0,0,0,1.65355761355942,0.622129148383483,0,0,0,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0.0870592065804026,0.698906672968121,0,0,0.292357268344742,0.328461828212837,0,3.79501344773451,0.225980740780532,0,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0,0.39961921916426,0,0.687219576995494,0,0,0,0,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.412079291905832,0.202210631562555,0,0.254019996197353,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0.844802692155252,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0.37494122388632,0.151649117541648,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0.737318726261158,0,0,0,0,1.13503190713367,0,0,0,0,0,0.157265941855896,0,0,0.637724760305049,0.495743057036009,1.67593475391973,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0.40341013740704,0,0.261906694481422,0.163771917510097,0,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0.255524855279191,0,0.672567444437648,0,0.455324382702595,0.177404740325278,0,0,0.203909198930495,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.697448552208751,0.521574816907738,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0.223710863595585,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0.356760272332706,0.11294608203896,0,0.150962843566674,0,0.218559560503957,0,0,0,0.588925401344836,0,0,0.339854229375634,0.187967835959707,0,0.199882311849858,0.178553938605658,0,0.160482733378337,0.730336388246517,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0.23806443146374,1.35636710655613,1.36564371450887,0,0.190941474834495,1.0105859447911,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.653638332277218,0,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0.76228387266739,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.929015875628594,0,0.355709216742071,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.492339221844278,0,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0.278847488557207,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.593042257361244,0.247127877893006,0.313265848516366,0.134802265961354,0,0,0.547364367646998,0,0.485560759068186,0.394584402849391,0,0,0,1.65355761355942,0.622129148383483,0,0,0,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0.0870592065804026,0.698906672968121,0,0,0.292357268344742,0.328461828212837,0,3.79501344773451,0.225980740780532,0,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0,0.39961921916426,0,0.687219576995494,0,0,0,0,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.412079291905832,0.202210631562555,0,0.254019996197353,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0.844802692155252,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0.37494122388632,0.151649117541648,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0.737318726261158,0,0,0,0,1.13503190713367,0,0,0,0,0,0.157265941855896,0,0,0.637724760305049,0.495743057036009,1.67593475391973,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0.40341013740704,0,0.261906694481422,0.163771917510097,0,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0.255524855279191,0,0.672567444437648,0,0.455324382702595,0.177404740325278,0,0,0.203909198930495,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0.697448552208751,0.521574816907738,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0.223710863595585,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0.356760272332706,0.11294608203896,0,0.150962843566674,0,0.218559560503957,0,0,0,0.588925401344836,0,0,0.339854229375634,0.187967835959707,0,0.199882311849858,0.178553938605658,0,0.160482733378337,0.730336388246517,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0.23806443146374,1.35636710655613,1.36564371450887,0,0.190941474834495,1.0105859447911,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p18@STAG2 | |||
}} | }} |
Latest revision as of 07:50, 19 September 2015
Short description: | p18@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000458700_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | B1AMS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.14e-23 | 4 |
hemolymphoid system gland | 5.14e-23 | 4 |
thymic region | 5.14e-23 | 4 |
pharyngeal gland | 5.14e-23 | 4 |
thymus primordium | 5.14e-23 | 4 |
entire pharyngeal arch endoderm | 1.32e-18 | 11 |
early pharyngeal endoderm | 1.32e-18 | 11 |
pharyngeal epithelium | 1.05e-15 | 6 |
hemopoietic organ | 1.31e-13 | 7 |
immune organ | 1.31e-13 | 7 |
neural tissue | 1.65e-12 | 2 |
pharyngeal arch system | 1.19e-11 | 18 |
neck | 8.09e-10 | 10 |
gland of gut | 8.09e-10 | 10 |
chordate pharynx | 8.09e-10 | 10 |
pharyngeal region of foregut | 8.09e-10 | 10 |
pharynx | 5.20e-09 | 11 |
cartilage tissue | 8.31e-09 | 3 |
skeletal tissue | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.07e-23 | 1 |
extraosseous chondrosarcoma | 1.07e-23 | 1 |
myxoid chondrosarcoma | 1.07e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.07e-23 | 1 |
connective tissue cancer | 9.74e-16 | 6 |
musculoskeletal system cancer | 9.74e-16 | 6 |
peripheral nerve sheath neoplasm | 1.65e-12 | 2 |
neurofibroma | 1.65e-12 | 2 |
histiocytoma | 2.90e-12 | 2 |
malignant fibroxanthoma | 2.90e-12 | 2 |
sarcoma | 1.15e-10 | 20 |
peripheral nervous system neoplasm | 8.96e-09 | 3 |