FFCP PHASE1:Hg19::chr22:23213658..23213683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5919 | |HGNC=5919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000390318_5end | |association_with_transcript=-2bp_to_ENST00000390318_5end | ||
|cluster_id=chr22:23213658..23213683,+ | |||
|coexpression_cluster_id=C183 | |coexpression_cluster_id=C183 | ||
|description=CAGE_peak_1_at_IGLV4-3_5end | |description=CAGE_peak_1_at_IGLV4-3_5end | ||
|id=chr22:23213658..23213683,+ | |id=chr22:23213658..23213683,+ | ||
|ontology_enrichment_celltype=CL:0000236!8.68e-36!14;CL:0000945!8.03e-26!24;CL:0000826!8.03e-26!24;CL:0000838!8.44e-10!52;CL:0000542!1.52e-09!53;CL:0000051!1.52e-09!53 | |ontology_enrichment_celltype=CL:0000236!8.68e-36!14;CL:0000945!8.03e-26!24;CL:0000826!8.03e-26!24;CL:0000838!8.44e-10!52;CL:0000542!1.52e-09!53;CL:0000051!1.52e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.74e-58;13!CL:0000945;1.66e-35;24!CL:0000542;4.00e-12;53!CL:0000817;5.58e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.31e-54,14;CL:0000945,1.55e-35,24;CL:0000826,1.55e-35,24;CL:0000838,6.90e-15,52;CL:0000542,1.49e-14,53;CL:0000051,1.49e-14,53 | |||
|ontology_enrichment_development_v019=CL:0000051;4.00e-12;53!UBERON:0004872;7.46e-12;7!UBERON:0006965;4.48e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.42e-24!115;UBERON:0004921!1.95e-07!129;UBERON:0004185!1.95e-07!129;UBERON:0003408!4.81e-07!10;UBERON:0001829!6.51e-07!2;UBERON:0004177!7.59e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.42e-24!115;UBERON:0004921!1.95e-07!129;UBERON:0004185!1.95e-07!129;UBERON:0003408!4.81e-07!10;UBERON:0001829!6.51e-07!2;UBERON:0004177!7.59e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.33e-08;3!UBERON:0000029;8.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.64e-15,114;UBERON:0002106,6.89e-08,3;UBERON:0004854,6.89e-08,3;UBERON:0009034,6.89e-08,3;UBERON:0002095,6.89e-08,3;UBERON:0004782,6.89e-08,3;UBERON:0003281,6.89e-08,3;UBERON:0009664,6.89e-08,3;UBERON:0002296,6.89e-08,3;UBERON:0005602,6.89e-08,3;UBERON:0001179,6.89e-08,3;UBERON:0006293,6.89e-08,3;UBERON:0000029,8.21e-07,1 | |||
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| ||
|short_description=p1@IGLV4-3 | |short_description=p1@IGLV4-3 | ||
}} | }} |
Latest revision as of 08:13, 19 September 2015
Short description: | p1@IGLV4-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGLV4-3_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | -2bp_to_ENST00000390318_5end |
EntrezGene: | NA |
HGNC: | 5919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.31e-54 | 14 |
lymphocyte of B lineage | 1.55e-35 | 24 |
pro-B cell | 1.55e-35 | 24 |
lymphoid lineage restricted progenitor cell | 6.90e-15 | 52 |
lymphocyte | 1.49e-14 | 53 |
common lymphoid progenitor | 1.49e-14 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.64e-15 | 114 |
spleen | 6.89e-08 | 3 |
gastrointestinal system mesentery | 6.89e-08 | 3 |
stomach region | 6.89e-08 | 3 |
mesentery | 6.89e-08 | 3 |
gastrointestinal system serosa | 6.89e-08 | 3 |
mesentery of stomach | 6.89e-08 | 3 |
gut mesentery | 6.89e-08 | 3 |
dorsal mesentery | 6.89e-08 | 3 |
dorsal mesogastrium | 6.89e-08 | 3 |
peritoneal cavity | 6.89e-08 | 3 |
spleen primordium | 6.89e-08 | 3 |
lymph node | 8.21e-07 | 1 |