FFCP PHASE1:Hg19::chr6:55956418..55956429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81578 | |EntrezGene=81578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |HGNC=17025 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000467045,uc003pcr.2_5end | |association_with_transcript=29bp_to_ENST00000467045,uc003pcr.2_5end | ||
|cluster_id=chr6:55956418..55956429,- | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_7_at_COL21A1_5end | |description=CAGE_peak_7_at_COL21A1_5end | ||
|id=chr6:55956418..55956429,- | |id=chr6:55956418..55956429,- | ||
|ontology_enrichment_celltype=CL:0002549!2.01e-08!2 | |ontology_enrichment_celltype=CL:0002549!2.01e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.48e-30;1!UBERON:0010226;2.37e-29;1!UBERON:0010227;3.64e-29;1!UBERON:0005062;3.92e-29;4!UBERON:0007284;3.92e-29;4 | |||
|ontology_enrichment_disease=DOID:114!4.42e-09!2 | |ontology_enrichment_disease=DOID:114!4.42e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.66e-15;2!DOID:1287;2.03e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.54e-15,2;DOID:1287,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002300!4.01e-12!3;UBERON:0007100!2.48e-10!27;UBERON:0003947!2.01e-08!2;UBERON:0005629!2.01e-08!2;UBERON:0005358!2.01e-08!2;UBERON:0001886!2.01e-08!2;UBERON:0004086!2.01e-08!2;UBERON:0005282!2.01e-08!2;UBERON:0005281!2.01e-08!2;UBERON:0003127!3.50e-08!2;UBERON:0007023!7.40e-07!115 | |ontology_enrichment_uberon=UBERON:0002300!4.01e-12!3;UBERON:0007100!2.48e-10!27;UBERON:0003947!2.01e-08!2;UBERON:0005629!2.01e-08!2;UBERON:0005358!2.01e-08!2;UBERON:0001886!2.01e-08!2;UBERON:0004086!2.01e-08!2;UBERON:0005282!2.01e-08!2;UBERON:0005281!2.01e-08!2;UBERON:0003127!3.50e-08!2;UBERON:0007023!7.40e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.43e-55;25!UBERON:0003978;1.98e-38;3!UBERON:0000946;1.98e-38;3!UBERON:0004151;3.51e-38;3!UBERON:0000948;2.63e-32;22!UBERON:0002146;9.99e-30;1!UBERON:0005623;9.99e-30;1!UBERON:0002084;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0002079;3.64e-29;1!UBERON:0002135;3.64e-29;1!UBERON:0002081;2.55e-15;2!UBERON:0002133;2.55e-15;2!UBERON:0010313;2.58e-12;10!UBERON:0003103;1.06e-11;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.82e-51,27;UBERON:0003978,1.80e-38,3;UBERON:0009751,1.80e-38,3;UBERON:0000946,1.80e-38,3;UBERON:0002523,1.80e-38,3;UBERON:0005983,1.80e-38,3;UBERON:0002165,1.80e-38,3;UBERON:0002062,1.80e-38,3;UBERON:0007280,1.80e-38,3;UBERON:0004151,3.86e-38,3;UBERON:0002146,9.99e-30,1;UBERON:0005623,9.99e-30,1;UBERON:0000948,1.16e-29,24;UBERON:0005498,1.16e-29,24;UBERON:0004140,1.16e-29,24;UBERON:0009881,1.16e-29,24;UBERON:0004141,1.16e-29,24;UBERON:0003084,1.16e-29,24;UBERON:0007005,1.16e-29,24;UBERON:0004139,1.16e-29,24;UBERON:0004291,1.16e-29,24;UBERON:0002084,2.37e-29,1;UBERON:0002082,2.37e-29,1;UBERON:0010226,2.37e-29,1;UBERON:0002135,3.16e-29,1;UBERON:0002079,4.20e-29,1;UBERON:0003103,1.45e-20,68;UBERON:0004797,3.71e-17,7;UBERON:0002133,2.37e-15,2;UBERON:0002081,2.74e-15,2;UBERON:0010227,2.74e-15,2;UBERON:0001009,1.36e-12,112;UBERON:0010313,2.51e-12,10;UBERON:0002342,2.51e-12,10;UBERON:0005062,2.51e-12,10;UBERON:0007023,3.77e-09,114;UBERON:0004872,7.51e-09,83;UBERON:0004535,8.55e-07,109 | |||
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| ||
|short_description=p7@COL21A1 | |short_description=p7@COL21A1 | ||
}} | }} |
Latest revision as of 08:37, 19 September 2015
Short description: | p7@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COL21A1_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 29bp_to_ENST00000467045, uc003pcr.2_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.54e-15 | 2 |
cardiovascular system disease | 1.96e-08 | 4 |