FFCP PHASE1:Hg19::chr15:83877013..83877079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50810 | |EntrezGene=50810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-243bp_to_BC040554_5end | |association_with_transcript=-243bp_to_BC040554_5end | ||
|cluster_id=chr15:83877013..83877079,- | |||
|description=CAGE_peak_5_at_HDGFRP3_5end | |description=CAGE_peak_5_at_HDGFRP3_5end | ||
|id=chr15:83877013..83877079,- | |id=chr15:83877013..83877079,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.71e-09;6!CL:0000404;1.71e-09;6!CL:0002322;1.50e-08;5!CL:0002321;9.12e-07;15 | |ontology_enrichment_celltype_v019=CL:0000540;1.71e-09;6!CL:0000404;1.71e-09;6!CL:0002322;1.50e-08;5!CL:0002321;9.12e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.64e-09,6;CL:0000031,1.64e-09,6;CL:0000404,1.64e-09,6;CL:0000047,6.72e-09,8;CL:0002322,1.68e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.71e-09;6 | |ontology_enrichment_development_v019=CL:0000031;1.71e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.50e-19!94;UBERON:0001016!3.50e-19!94;UBERON:0005743!4.84e-19!86;UBERON:0001017!2.20e-18!82;UBERON:0002346!2.93e-17!90;UBERON:0003075!2.72e-16!86;UBERON:0007284!2.72e-16!86;UBERON:0001049!4.05e-15!57;UBERON:0005068!4.05e-15!57;UBERON:0006241!4.05e-15!57;UBERON:0007135!4.05e-15!57;UBERON:0000924!8.43e-15!173;UBERON:0006601!8.43e-15!173;UBERON:0000955!3.05e-14!69;UBERON:0006238!3.05e-14!69;UBERON:0004121!6.22e-14!169;UBERON:0002616!3.39e-13!59;UBERON:0000153!4.61e-13!129;UBERON:0007811!4.61e-13!129;UBERON:0000119!6.66e-13!312;UBERON:0000483!2.08e-12!309;UBERON:0000033!3.55e-12!123;UBERON:0002020!2.78e-11!34;UBERON:0003528!2.78e-11!34;UBERON:0003056!4.49e-11!61;UBERON:0000475!7.51e-11!365;UBERON:0001893!1.69e-10!34;UBERON:0001869!3.08e-10!32;UBERON:0002791!3.86e-10!33;UBERON:0003080!4.12e-10!42;UBERON:0002780!6.09e-10!41;UBERON:0001890!6.09e-10!41;UBERON:0006240!6.09e-10!41;UBERON:0000481!7.62e-09!347;UBERON:0000477!1.04e-08!286;UBERON:0000956!3.13e-08!25;UBERON:0000203!3.13e-08!25;UBERON:0000025!3.69e-08!194;UBERON:0002619!9.59e-08!22;UBERON:0004111!1.28e-07!241 | |ontology_enrichment_uberon=UBERON:0000073!3.50e-19!94;UBERON:0001016!3.50e-19!94;UBERON:0005743!4.84e-19!86;UBERON:0001017!2.20e-18!82;UBERON:0002346!2.93e-17!90;UBERON:0003075!2.72e-16!86;UBERON:0007284!2.72e-16!86;UBERON:0001049!4.05e-15!57;UBERON:0005068!4.05e-15!57;UBERON:0006241!4.05e-15!57;UBERON:0007135!4.05e-15!57;UBERON:0000924!8.43e-15!173;UBERON:0006601!8.43e-15!173;UBERON:0000955!3.05e-14!69;UBERON:0006238!3.05e-14!69;UBERON:0004121!6.22e-14!169;UBERON:0002616!3.39e-13!59;UBERON:0000153!4.61e-13!129;UBERON:0007811!4.61e-13!129;UBERON:0000119!6.66e-13!312;UBERON:0000483!2.08e-12!309;UBERON:0000033!3.55e-12!123;UBERON:0002020!2.78e-11!34;UBERON:0003528!2.78e-11!34;UBERON:0003056!4.49e-11!61;UBERON:0000475!7.51e-11!365;UBERON:0001893!1.69e-10!34;UBERON:0001869!3.08e-10!32;UBERON:0002791!3.86e-10!33;UBERON:0003080!4.12e-10!42;UBERON:0002780!6.09e-10!41;UBERON:0001890!6.09e-10!41;UBERON:0006240!6.09e-10!41;UBERON:0000481!7.62e-09!347;UBERON:0000477!1.04e-08!286;UBERON:0000956!3.13e-08!25;UBERON:0000203!3.13e-08!25;UBERON:0000025!3.69e-08!194;UBERON:0002619!9.59e-08!22;UBERON:0004111!1.28e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.37e-09;22!UBERON:0000956;5.36e-08;25!UBERON:0000203;5.36e-08;25!UBERON:0003528;5.69e-08;34!UBERON:0002020;5.69e-08;34!UBERON:0001950;1.16e-07;20!UBERON:0001869;3.23e-07;32!UBERON:0001893;6.65e-07;34!UBERON:0002791;7.99e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.37e-09;22!UBERON:0000956;5.36e-08;25!UBERON:0000203;5.36e-08;25!UBERON:0003528;5.69e-08;34!UBERON:0002020;5.69e-08;34!UBERON:0001950;1.16e-07;20!UBERON:0001869;3.23e-07;32!UBERON:0001893;6.65e-07;34!UBERON:0002791;7.99e-07;32 | ||
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| ||
|short_description=p5@HDGFRP3 | |short_description=p5@HDGFRP3 | ||
}} | }} |
Latest revision as of 12:10, 19 September 2015
Short description: | p5@HDGFRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HDGFRP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -243bp_to_BC040554_5end |
EntrezGene: | HDGFRP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.64e-09 | 6 |
neuroblast | 1.64e-09 | 6 |
electrically signaling cell | 1.64e-09 | 6 |
neuronal stem cell | 6.72e-09 | 8 |
embryonic stem cell | 1.68e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.39e-17 | 89 |
central nervous system | 7.25e-17 | 81 |
ectoderm-derived structure | 5.82e-14 | 171 |
ectoderm | 5.82e-14 | 171 |
presumptive ectoderm | 5.82e-14 | 171 |
neurectoderm | 1.72e-12 | 86 |
neural plate | 7.29e-12 | 82 |
presumptive neural plate | 7.29e-12 | 82 |
neural tube | 8.23e-12 | 56 |
neural rod | 8.23e-12 | 56 |
future spinal cord | 8.23e-12 | 56 |
neural keel | 8.23e-12 | 56 |
brain grey matter | 4.76e-10 | 34 |
gray matter | 4.76e-10 | 34 |
regional part of nervous system | 5.83e-10 | 53 |
regional part of brain | 5.83e-10 | 53 |
regional part of cerebral cortex | 6.87e-10 | 22 |
brain | 7.15e-10 | 68 |
future brain | 7.15e-10 | 68 |
ecto-epithelium | 3.13e-09 | 104 |
structure with developmental contribution from neural crest | 9.81e-09 | 132 |
telencephalon | 1.12e-08 | 34 |
regional part of telencephalon | 1.63e-08 | 32 |
cerebral hemisphere | 1.80e-08 | 32 |
pre-chordal neural plate | 1.97e-08 | 61 |
cerebral cortex | 2.98e-08 | 25 |
pallium | 2.98e-08 | 25 |
regional part of forebrain | 3.81e-08 | 41 |
forebrain | 3.81e-08 | 41 |
anterior neural tube | 3.81e-08 | 41 |
future forebrain | 3.81e-08 | 41 |
neocortex | 5.58e-08 | 20 |
organ system subdivision | 1.42e-07 | 223 |