FFCP PHASE1:Hg19::chr15:83877106..83877122,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50810 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-336bp_to_BC040554_5end | |||
|cluster_id=chr15:83877106..83877122,- | |||
|description=CAGE_peak_12_at_HDGFRP3_5end | |||
|id=chr15:83877106..83877122,- | |||
|ontology_enrichment_celltype=CL:0002322!1.99e-07!5;CL:0002319!3.94e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.48e-55;5!CL:0002321;1.69e-18;15!CL:0000540;1.85e-17;6!CL:0000404;1.85e-17;6!CL:0000148;1.33e-10;10!CL:0000147;1.01e-07;14!CL:0002319;7.88e-07;25!CL:0000123;9.53e-07;2!CL:0000242;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.11e-55,5;CL:0000540,1.52e-17,6;CL:0000031,1.52e-17,6;CL:0000404,1.52e-17,6;CL:0000047,2.60e-13,8;CL:0000148,1.62e-10,10;CL:0000541,1.62e-10,10;CL:0000133,2.74e-08,59;CL:0000147,1.16e-07,14;CL:0002319,7.35e-07,25;CL:0000242,9.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.85e-17;6!UBERON:0009117;2.16e-10;10!UBERON:0005564;2.16e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.96e-08;22!DOID:2994;2.96e-08;22!DOID:3307;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.72e-08,22;DOID:2994,2.72e-08,22;DOID:3307,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.61e-10!94;UBERON:0001016!2.61e-10!94;UBERON:0005743!1.25e-09!86;UBERON:0000924!5.95e-09!173;UBERON:0006601!5.95e-09!173;UBERON:0004121!1.24e-08!169;UBERON:0001017!1.26e-07!82;UBERON:0000033!1.26e-07!123;UBERON:0000153!1.74e-07!129;UBERON:0007811!1.74e-07!129;UBERON:0002346!4.03e-07!90;UBERON:0003075!7.99e-07!86;UBERON:0007284!7.99e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.61e-09;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,4.5060121229305,2.32387885739037,1.0366105501537,2.52320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0,0,0.552485933615378,0,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.769350375349168,0.656029291399411,0.650756789328606,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849523652246594,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.552896299656123,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0.421996129056054,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.126373159256976,0.300646838828985,0.414752765588989,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0,0.17472666824203,0.343972064943233,0.0967563312890851,0,0,0,0.353024506766001,0.451961481561065,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0,0.432271251462318,0.114536596165916,0.171594997861965,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,3.49487848582361,0,0,0,0,0,0,0.136203406111576,2.57205037544031,2.75078873194468,2.49264202817511,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.628817220398664,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.3755727921195,0,0.443716206147409,0,0.276697269872462,0.124980407962107,0.151649117541648,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.39997479170986,0,0,0,0,0.139879507719444,0,0.639471856518258,0.539124056983409,0,0.327628914576042,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,1.26035848110859,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0.175871244359621,0,0,0,0,0.682986574053893,0.0887023701626388,0.230467975111559,0,0,0.131545547125698,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0,0,0.214429632529969,0.790068058663633,0.23248285073625,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0.439762066981716,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.157771562193185,0,1.30905207102113,0,0,0,0,1.51399709802095,3.05943601498347,0.126698501011437,0.101988829741982,1.3360870263278,0.18378979906969,0.50141507858475,0,1.07185652062471,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0,0.143444410785353,0,0.325613074443898,0.106727345877715,1.9307228228694,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p12@HDGFRP3 | |||
}} |
Latest revision as of 12:12, 19 September 2015
Short description: | p12@HDGFRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HDGFRP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -336bp_to_BC040554_5end |
EntrezGene: | HDGFRP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.11e-55 | 5 |
neuron | 1.52e-17 | 6 |
neuroblast | 1.52e-17 | 6 |
electrically signaling cell | 1.52e-17 | 6 |
neuronal stem cell | 2.60e-13 | 8 |
melanocyte | 1.62e-10 | 10 |
melanoblast | 1.62e-10 | 10 |
neurectodermal cell | 2.74e-08 | 59 |
pigment cell | 1.16e-07 | 14 |
neural cell | 7.35e-07 | 25 |
Merkel cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.72e-08 | 22 |
germ cell cancer | 2.72e-08 | 22 |
teratoma | 8.06e-07 | 2 |