FFCP PHASE1:Hg19::chr7:75932929..75932953,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3315 | |EntrezGene=3315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5246 | |HGNC=5246 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3N8 | |UniProt=C9J3N8 | ||
|association_with_transcript=35bp_to_ENST00000429938,uc010ldj.1_5end | |association_with_transcript=35bp_to_ENST00000429938,uc010ldj.1_5end | ||
|cluster_id=chr7:75932929..75932953,+ | |||
|coexpression_cluster_id=C4700 | |coexpression_cluster_id=C4700 | ||
|description=CAGE_peak_5_at_HSPB1_5end | |description=CAGE_peak_5_at_HSPB1_5end | ||
|id=chr7:75932929..75932953,+ | |id=chr7:75932929..75932953,+ | ||
|ontology_enrichment_celltype=CL:0000542!4.33e-19!53;CL:0000051!4.33e-19!53;CL:0000838!1.57e-18!52;CL:0000988!1.86e-13!182;CL:0000037!8.34e-12!172;CL:0000566!8.34e-12!172;CL:0000084!4.61e-11!25;CL:0000827!4.61e-11!25;CL:0000791!8.96e-10!18;CL:0000789!8.96e-10!18;CL:0002420!8.96e-10!18;CL:0002419!8.96e-10!18;CL:0000790!8.96e-10!18;CL:0002032!9.09e-10!165;CL:0000837!9.09e-10!165;CL:0000625!6.55e-08!11;CL:0000945!1.05e-07!24;CL:0000826!1.05e-07!24;CL:0002031!5.52e-07!124 | |ontology_enrichment_celltype=CL:0000542!4.33e-19!53;CL:0000051!4.33e-19!53;CL:0000838!1.57e-18!52;CL:0000988!1.86e-13!182;CL:0000037!8.34e-12!172;CL:0000566!8.34e-12!172;CL:0000084!4.61e-11!25;CL:0000827!4.61e-11!25;CL:0000791!8.96e-10!18;CL:0000789!8.96e-10!18;CL:0002420!8.96e-10!18;CL:0002419!8.96e-10!18;CL:0000790!8.96e-10!18;CL:0002032!9.09e-10!165;CL:0000837!9.09e-10!165;CL:0000625!6.55e-08!11;CL:0000945!1.05e-07!24;CL:0000826!1.05e-07!24;CL:0002031!5.52e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.84e-13;25!CL:0000542;9.86e-13;53!CL:0000791;3.89e-11;18!CL:0000789;3.89e-11;18!CL:0002419;3.89e-11;18!CL:0000625;1.31e-08;11!CL:0000945;2.76e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.44e-22,53;CL:0000051,4.44e-22,53;CL:0000838,1.89e-21,52;CL:0000988,2.71e-16,177;CL:0000037,1.65e-14,168;CL:0000084,7.28e-13,25;CL:0000827,7.28e-13,25;CL:0002032,4.19e-12,161;CL:0000837,4.19e-12,161;CL:0000791,4.43e-11,18;CL:0000789,4.43e-11,18;CL:0002420,4.43e-11,18;CL:0002419,4.43e-11,18;CL:0000790,4.43e-11,18;CL:0000945,1.10e-08,24;CL:0000826,1.10e-08,24;CL:0000625,1.36e-08,11;CL:0002031,2.53e-08,120;CL:0002087,3.84e-07,115;CL:0000738,4.27e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;9.86e-13;53!CL:0000790;3.89e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!6.12e-11!51;DOID:0060083!6.12e-11!51;DOID:1240!3.94e-09!39;DOID:8692!2.09e-08!31;DOID:0050686!5.45e-07!137 | |ontology_enrichment_disease=DOID:2531!6.12e-11!51;DOID:0060083!6.12e-11!51;DOID:1240!3.94e-09!39;DOID:8692!2.09e-08!31;DOID:0050686!5.45e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.58e-09;31!DOID:1240;3.15e-09;39!DOID:2531;2.95e-08;51!DOID:0060083;2.95e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.78e-13,51;DOID:0060083,2.78e-13,51;DOID:1240,4.33e-11,39;DOID:8692,9.60e-10,31;DOID:0050686,3.24e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.89e-09!15;UBERON:0000179!1.89e-09!15;UBERON:0000463!1.89e-09!15 | |ontology_enrichment_uberon=UBERON:0000178!1.89e-09!15;UBERON:0000179!1.89e-09!15;UBERON:0000463!1.89e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.46e-10;15!UBERON:0000179;2.46e-10;15!UBERON:0000463;2.46e-10;15!UBERON:0002390;6.44e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.68e-10,15;UBERON:0000179,2.68e-10,15;UBERON:0000463,2.68e-10,15;UBERON:0001557,3.49e-07,19 | |||
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| ||
|short_description=p5@HSPB1 | |short_description=p5@HSPB1 | ||
}} | }} |
Latest revision as of 13:21, 19 September 2015
Short description: | p5@HSPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HSPB1_5end |
Coexpression cluster: | C4700_thymus_adrenal_Whole_acute_CD4_Burkitt_Reticulocytes |
Association with transcript: | 35bp_to_ENST00000429938, uc010ldj.1_5end |
EntrezGene: | HSPB1 |
HGNC: | 5246 |
UniProt: | C9J3N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.44e-22 | 53 |
common lymphoid progenitor | 4.44e-22 | 53 |
lymphoid lineage restricted progenitor cell | 1.89e-21 | 52 |
hematopoietic cell | 2.71e-16 | 177 |
hematopoietic stem cell | 1.65e-14 | 168 |
T cell | 7.28e-13 | 25 |
pro-T cell | 7.28e-13 | 25 |
hematopoietic oligopotent progenitor cell | 4.19e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.19e-12 | 161 |
mature alpha-beta T cell | 4.43e-11 | 18 |
alpha-beta T cell | 4.43e-11 | 18 |
immature T cell | 4.43e-11 | 18 |
mature T cell | 4.43e-11 | 18 |
immature alpha-beta T cell | 4.43e-11 | 18 |
lymphocyte of B lineage | 1.10e-08 | 24 |
pro-B cell | 1.10e-08 | 24 |
CD8-positive, alpha-beta T cell | 1.36e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 2.53e-08 | 120 |
nongranular leukocyte | 3.84e-07 | 115 |
leukocyte | 4.27e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 2.68e-10 | 15 |
haemolymphatic fluid | 2.68e-10 | 15 |
organism substance | 2.68e-10 | 15 |
upper respiratory tract | 3.49e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.78e-13 | 51 |
immune system cancer | 2.78e-13 | 51 |
leukemia | 4.33e-11 | 39 |
myeloid leukemia | 9.60e-10 | 31 |
organ system cancer | 3.24e-08 | 137 |