FFCP PHASE1:Hg19::chr19:51472222..51472234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5653 | |EntrezGene=5653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6367 | |HGNC=6367 | ||
|TSSclassifier=strong | |||
|UniProt=Q92876 | |UniProt=Q92876 | ||
|association_with_transcript=-175bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | |association_with_transcript=-175bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | ||
|cluster_id=chr19:51472222..51472234,- | |||
|coexpression_cluster_id=C849 | |coexpression_cluster_id=C849 | ||
|description=CAGE_peak_9_at_KLK6_5end | |description=CAGE_peak_9_at_KLK6_5end | ||
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|ontology_enrichment_celltype=CL:0002322!6.89e-13!5;CL:1000507!1.49e-10!12;CL:1000494!1.49e-10!12;CL:0000066!1.85e-10!254;CL:0000239!2.36e-09!3;CL:1000615!2.36e-09!3;CL:0002306!2.36e-09!3;CL:0002178!5.62e-09!3;CL:1000497!1.39e-08!18;CL:0002518!1.39e-08!18;CL:1000449!1.28e-07!16 | |ontology_enrichment_celltype=CL:0002322!6.89e-13!5;CL:1000507!1.49e-10!12;CL:1000494!1.49e-10!12;CL:0000066!1.85e-10!254;CL:0000239!2.36e-09!3;CL:1000615!2.36e-09!3;CL:0002306!2.36e-09!3;CL:0002178!5.62e-09!3;CL:1000497!1.39e-08!18;CL:0002518!1.39e-08!18;CL:1000449!1.28e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.26e-12;3!CL:1000615;1.26e-12;3!CL:0002306;1.26e-12;3!CL:0000313;7.88e-10;1!CL:0000083;8.26e-10;4!CL:1000507;1.75e-08;10!CL:1000494;1.75e-08;10!CL:0002681;3.80e-07;12!CL:0002584;3.80e-07;12 | |ontology_enrichment_celltype_v019=CL:0000239;1.26e-12;3!CL:1000615;1.26e-12;3!CL:0002306;1.26e-12;3!CL:0000313;7.88e-10;1!CL:0000083;8.26e-10;4!CL:1000507;1.75e-08;10!CL:1000494;1.75e-08;10!CL:0002681;3.80e-07;12!CL:0002584;3.80e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-12,3;CL:1000615,1.12e-12,3;CL:0002306,1.12e-12,3;CL:0000083,8.26e-10,4;CL:0000313,1.17e-09,1;CL:0000066,2.41e-09,253;CL:1000507,1.64e-08,10;CL:1000494,1.64e-08,10;CL:0002681,3.60e-07,12;CL:0002584,3.60e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.88e-10;1 | |ontology_enrichment_development_v019=UBERON:0005425;7.88e-10;1 | ||
|ontology_enrichment_disease=DOID:305!2.56e-17!106;DOID:0050687!1.90e-14!143;DOID:299!8.33e-14!25;DOID:1749!5.24e-08!14;DOID:4074!5.48e-07!2;DOID:4905!5.48e-07!2;DOID:3498!5.48e-07!2 | |ontology_enrichment_disease=DOID:305!2.56e-17!106;DOID:0050687!1.90e-14!143;DOID:299!8.33e-14!25;DOID:1749!5.24e-08!14;DOID:4074!5.48e-07!2;DOID:4905!5.48e-07!2;DOID:3498!5.48e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:299;2.21e-21;25!DOID:4074;1.10e-18;2!DOID:4905;1.10e-18;2!DOID:3498;1.10e-18;2!DOID:3111;1.98e-10;1!DOID:3603;1.98e-10;1!DOID:2152;7.88e-10;1!DOID:1793;8.26e-10;4!DOID:170;8.15e-07;6 | |ontology_enrichment_disease_v019=DOID:299;2.21e-21;25!DOID:4074;1.10e-18;2!DOID:4905;1.10e-18;2!DOID:3498;1.10e-18;2!DOID:3111;1.98e-10;1!DOID:3603;1.98e-10;1!DOID:2152;7.88e-10;1!DOID:1793;8.26e-10;4!DOID:170;8.15e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:299,2.79e-21,25;DOID:4074,1.10e-18,2;DOID:4905,1.10e-18,2;DOID:3498,1.10e-18,2;DOID:305,5.61e-16,106;DOID:0050687,3.57e-11,143;DOID:3111,1.98e-10,1;DOID:3603,1.98e-10,1;DOID:1793,8.26e-10,4;DOID:2152,1.17e-09,1;DOID:0050686,4.43e-07,137;DOID:170,8.15e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000489!3.67e-11!32;UBERON:0009773!1.49e-10!12;UBERON:0001231!1.49e-10!12;UBERON:0004810!1.49e-10!12;UBERON:0000058!1.96e-10!26;UBERON:0006853!2.36e-09!3;UBERON:0007685!2.36e-09!3;UBERON:0004134!2.36e-09!3;UBERON:0002294!4.08e-09!7;UBERON:0001173!4.08e-09!7;UBERON:0004912!4.08e-09!7;UBERON:0002240!1.84e-08!3;UBERON:0005177!3.31e-08!107;UBERON:0002113!4.88e-08!27;UBERON:0003918!4.88e-08!27;UBERON:0005095!4.88e-08!27;UBERON:0007687!4.88e-08!27;UBERON:0004211!1.28e-07!16;UBERON:0001285!1.28e-07!16;UBERON:0007684!1.28e-07!16;UBERON:0003220!1.28e-07!16;UBERON:0004208!1.28e-07!16;UBERON:0003886!3.91e-07!63;UBERON:0006555!4.19e-07!17;UBERON:0005103!4.19e-07!17;UBERON:0000083!4.19e-07!17;UBERON:0009201!4.19e-07!17;UBERON:0004819!4.19e-07!17;UBERON:0006553!4.19e-07!17;UBERON:0003074!4.19e-07!17;UBERON:0003060!4.19e-07!17;UBERON:0003887!4.92e-07!21;UBERON:0000464!5.42e-07!104;UBERON:0002553!5.51e-07!70;UBERON:0001017!6.12e-07!82;UBERON:0000466!6.71e-07!126 | |ontology_enrichment_uberon=UBERON:0000489!3.67e-11!32;UBERON:0009773!1.49e-10!12;UBERON:0001231!1.49e-10!12;UBERON:0004810!1.49e-10!12;UBERON:0000058!1.96e-10!26;UBERON:0006853!2.36e-09!3;UBERON:0007685!2.36e-09!3;UBERON:0004134!2.36e-09!3;UBERON:0002294!4.08e-09!7;UBERON:0001173!4.08e-09!7;UBERON:0004912!4.08e-09!7;UBERON:0002240!1.84e-08!3;UBERON:0005177!3.31e-08!107;UBERON:0002113!4.88e-08!27;UBERON:0003918!4.88e-08!27;UBERON:0005095!4.88e-08!27;UBERON:0007687!4.88e-08!27;UBERON:0004211!1.28e-07!16;UBERON:0001285!1.28e-07!16;UBERON:0007684!1.28e-07!16;UBERON:0003220!1.28e-07!16;UBERON:0004208!1.28e-07!16;UBERON:0003886!3.91e-07!63;UBERON:0006555!4.19e-07!17;UBERON:0005103!4.19e-07!17;UBERON:0000083!4.19e-07!17;UBERON:0009201!4.19e-07!17;UBERON:0004819!4.19e-07!17;UBERON:0006553!4.19e-07!17;UBERON:0003074!4.19e-07!17;UBERON:0003060!4.19e-07!17;UBERON:0003887!4.92e-07!21;UBERON:0000464!5.42e-07!104;UBERON:0002553!5.51e-07!70;UBERON:0001017!6.12e-07!82;UBERON:0000466!6.71e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.26e-12;3!UBERON:0007685;1.26e-12;3!UBERON:0004134;1.26e-12;3!UBERON:0004913;1.80e-10;1!UBERON:0003703;1.80e-10;1!UBERON:0001174;1.80e-10;1!UBERON:0004914;1.80e-10;1!UBERON:0005795;7.88e-10;1!UBERON:0000941;7.88e-10;1!UBERON:0004911;7.88e-10;1!UBERON:0001785;7.88e-10;1!UBERON:0002464;7.88e-10;1!UBERON:0004904;7.88e-10;1!UBERON:0001021;7.88e-10;1!UBERON:0004211;1.75e-08;10!UBERON:0009773;1.75e-08;10!UBERON:0001231;1.75e-08;10!UBERON:0004810;1.75e-08;10!UBERON:0001225;3.80e-07;12!UBERON:0008987;3.80e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0006853;1.26e-12;3!UBERON:0007685;1.26e-12;3!UBERON:0004134;1.26e-12;3!UBERON:0004913;1.80e-10;1!UBERON:0003703;1.80e-10;1!UBERON:0001174;1.80e-10;1!UBERON:0004914;1.80e-10;1!UBERON:0005795;7.88e-10;1!UBERON:0000941;7.88e-10;1!UBERON:0004911;7.88e-10;1!UBERON:0001785;7.88e-10;1!UBERON:0002464;7.88e-10;1!UBERON:0004904;7.88e-10;1!UBERON:0001021;7.88e-10;1!UBERON:0004211;1.75e-08;10!UBERON:0009773;1.75e-08;10!UBERON:0001231;1.75e-08;10!UBERON:0004810;1.75e-08;10!UBERON:0001225;3.80e-07;12!UBERON:0008987;3.80e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.12e-12,3;UBERON:0007685,1.12e-12,3;UBERON:0004134,1.12e-12,3;UBERON:0004913,1.80e-10,1;UBERON:0003703,1.80e-10,1;UBERON:0001174,1.80e-10,1;UBERON:0004914,1.80e-10,1;UBERON:0000941,7.55e-10,1;UBERON:0001785,7.55e-10,1;UBERON:0002464,7.55e-10,1;UBERON:0004904,7.55e-10,1;UBERON:0001021,7.55e-10,1;UBERON:0003902,7.55e-10,1;UBERON:0005425,7.55e-10,1;UBERON:0004911,1.17e-09,1;UBERON:0004810,1.64e-08,10;UBERON:0001225,3.60e-07,12;UBERON:0008987,3.60e-07,12 | |||
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| ||
|short_description=p9@KLK6 | |short_description=p9@KLK6 | ||
}} | }} |
Latest revision as of 13:32, 19 September 2015
Short description: | p9@KLK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KLK6_5end |
Coexpression cluster: | C849_papillotubular_lung_mucinous_oral_Renal_clear_gall |
Association with transcript: | -175bp_to_ENST00000376851, ENST00000391808, NM_001012964, NM_001012965, uc002pui.2, uc002puj.2, uc010ycn.1_5end |
EntrezGene: | KLK6 |
HGNC: | 6367 |
UniProt: | Q92876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.12e-12 | 3 |
kidney cortex tubule cell | 1.12e-12 | 3 |
epithelial cell of proximal tubule | 1.12e-12 | 3 |
epithelial cell of pancreas | 8.26e-10 | 4 |
serous secreting cell | 1.17e-09 | 1 |
epithelial cell | 2.41e-09 | 253 |
kidney tubule cell | 1.64e-08 | 10 |
nephron tubule epithelial cell | 1.64e-08 | 10 |
kidney cortical cell | 3.60e-07 | 12 |
renal cortical epithelial cell | 3.60e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.12e-12 | 3 |
region of nephron tubule | 1.12e-12 | 3 |
proximal tubule | 1.12e-12 | 3 |
hepatopancreatic ampulla | 1.80e-10 | 1 |
extrahepatic bile duct | 1.80e-10 | 1 |
common bile duct | 1.80e-10 | 1 |
duodenal papilla | 1.80e-10 | 1 |
cranial nerve II | 7.55e-10 | 1 |
cranial nerve | 7.55e-10 | 1 |
nerve trunk | 7.55e-10 | 1 |
nerve connecting eye with brain | 7.55e-10 | 1 |
nerve | 7.55e-10 | 1 |
retinal neural layer | 7.55e-10 | 1 |
presumptive neural retina | 7.55e-10 | 1 |
epithelium of female gonad | 1.17e-09 | 1 |
nephron tubule epithelium | 1.64e-08 | 10 |
cortex of kidney | 3.60e-07 | 12 |
renal parenchyma | 3.60e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.79e-21 | 25 |
pancreas adenocarcinoma | 1.10e-18 | 2 |
pancreatic carcinoma | 1.10e-18 | 2 |
pancreatic ductal adenocarcinoma | 1.10e-18 | 2 |
carcinoma | 5.61e-16 | 106 |
cell type cancer | 3.57e-11 | 143 |
cystadenocarcinoma | 1.98e-10 | 1 |
mucinous cystadenocarcinoma | 1.98e-10 | 1 |
pancreatic cancer | 8.26e-10 | 4 |
ovary epithelial cancer | 1.17e-09 | 1 |
organ system cancer | 4.43e-07 | 137 |
endocrine gland cancer | 8.15e-07 | 6 |