FFCP PHASE1:Hg19::chr19:51487157..51487179,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:51487157..51487179,-
|short_description=p1@KLK7
|description=CAGE_peak_1_at_KLK7_5end
|association_with_transcript=-7bp_to_ENST00000304045,uc002pup.2,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5650 | |EntrezGene=5650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6368 | |HGNC=6368 | ||
|TSSclassifier=strong | |||
|UniProt=P49862 | |UniProt=P49862 | ||
|association_with_transcript=-7bp_to_ENST00000304045,uc002pup.2,uc010eok.2,uc010yco.1_5end | |||
|cluster_id=chr19:51487157..51487179,- | |||
|description=CAGE_peak_1_at_KLK7_5end | |||
|id=chr19:51487157..51487179,- | |||
|ontology_enrichment_celltype=CL:0002076!5.04e-17!43;CL:0000223!1.24e-10!59;CL:0002368!3.89e-09!13;CL:0002159!1.49e-08!13;CL:0000066!2.51e-08!254;CL:0002251!3.59e-08!21;CL:0000990!1.76e-07!8;CL:0000622!3.69e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.49e-16;42!CL:0002368;7.31e-12;13!CL:1000507;8.90e-12;10!CL:1000494;8.90e-12;10!CL:0000622;2.46e-10;5!CL:0002159;2.87e-10;14!CL:0002251;9.69e-10;20!CL:1000449;4.27e-09;15!CL:0000990;5.24e-09;8!CL:0000453;7.35e-09;5!CL:0000154;1.61e-08;6!CL:0000150;7.02e-08;9!CL:1000497;8.47e-08;17!CL:0002518;8.47e-08;17!CL:0000451;3.64e-07;10!CL:0002623;5.32e-07;3!CL:0002621;5.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.97e-21,42;CL:0000066,2.14e-14,253;CL:0000223,1.58e-13,58;CL:0002368,7.23e-12,13;CL:1000507,8.10e-12,10;CL:1000494,8.10e-12,10;CL:0000622,2.51e-10,5;CL:0002159,2.98e-10,14;CL:0002251,1.09e-09,20;CL:1000449,4.12e-09,15;CL:0000990,5.92e-09,8;CL:0000453,8.78e-09,5;CL:0000154,1.64e-08,6;CL:0000150,7.11e-08,9;CL:1000497,8.22e-08,17;CL:0002518,8.22e-08,17;CL:0000451,4.01e-07,10;CL:0002623,5.27e-07,3;CL:0002621,5.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.42e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.45e-23!115;UBERON:0004121!5.19e-13!169;UBERON:0000924!2.82e-12!173;UBERON:0006601!2.82e-12!173;UBERON:0000062!3.08e-12!511;UBERON:0001004!6.27e-12!72;UBERON:0000064!9.76e-11!219;UBERON:0000153!2.33e-10!129;UBERON:0007811!2.33e-10!129;UBERON:0000033!1.29e-09!123;UBERON:0000475!7.20e-09!365;UBERON:0000166!7.37e-09!21;UBERON:0000922!1.22e-08!612;UBERON:0001049!1.24e-08!57;UBERON:0005068!1.24e-08!57;UBERON:0006241!1.24e-08!57;UBERON:0007135!1.24e-08!57;UBERON:0004119!2.28e-08!169;UBERON:0000925!2.28e-08!169;UBERON:0006595!2.28e-08!169;UBERON:0002050!4.27e-08!605;UBERON:0005423!4.27e-08!605;UBERON:0000464!4.29e-08!104;UBERON:0000923!1.04e-07!604;UBERON:0005291!1.04e-07!604;UBERON:0006598!1.04e-07!604;UBERON:0002532!1.04e-07!604;UBERON:0000161!1.21e-07!35;UBERON:0000065!1.28e-07!53;UBERON:0000467!1.54e-07!625;UBERON:0000480!1.83e-07!626;UBERON:0001044!2.10e-07!6;UBERON:0003293!2.10e-07!6;UBERON:0003294!2.10e-07!6;UBERON:0010047!2.10e-07!6;UBERON:0000167!2.10e-07!6;UBERON:0002298!2.25e-07!8;UBERON:0000165!2.30e-07!28;UBERON:0000930!2.30e-07!28;UBERON:0000481!2.43e-07!347;UBERON:0003075!4.15e-07!86;UBERON:0007284!4.15e-07!86;UBERON:0000468!4.34e-07!659;UBERON:0005181!6.70e-07!35;UBERON:0004111!7.17e-07!241;UBERON:0005157!9.03e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;6.94e-12;14!UBERON:0004211;8.90e-12;10!UBERON:0009773;8.90e-12;10!UBERON:0001231;8.90e-12;10!UBERON:0004810;8.90e-12;10!UBERON:0001044;1.15e-10;6!UBERON:0003293;1.15e-10;6!UBERON:0003294;1.15e-10;6!UBERON:0010047;1.15e-10;6!UBERON:0003408;1.15e-10;6!UBERON:0000167;1.15e-10;6!UBERON:0000165;3.60e-10;28!UBERON:0000161;5.99e-10;19!UBERON:0000166;5.99e-10;19!UBERON:0006555;4.27e-09;15!UBERON:0004819;4.27e-09;15!UBERON:0001285;4.27e-09;15!UBERON:0007684;4.27e-09;15!UBERON:0001949;5.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.57e-13,74;UBERON:0000166,4.16e-12,22;UBERON:0004810,8.10e-12,10;UBERON:0001044,1.04e-10,6;UBERON:0003293,1.04e-10,6;UBERON:0003294,1.04e-10,6;UBERON:0010047,1.04e-10,6;UBERON:0000167,1.04e-10,6;UBERON:0006555,3.67e-10,16;UBERON:0004819,3.67e-10,16;UBERON:0000165,1.14e-09,29;UBERON:0000930,1.14e-09,29;UBERON:0004211,4.12e-09,15;UBERON:0009773,4.12e-09,15;UBERON:0001231,4.12e-09,15;UBERON:0001285,4.12e-09,15;UBERON:0007684,4.12e-09,15;UBERON:0004208,4.12e-09,15;UBERON:0000161,1.38e-08,36;UBERON:0004119,7.60e-08,160;UBERON:0000925,7.60e-08,160;UBERON:0006595,7.60e-08,160;UBERON:0000033,1.90e-07,56;UBERON:0000153,3.41e-07,62;UBERON:0007811,3.41e-07,62;UBERON:0001444,4.62e-07,49;UBERON:0003102,5.03e-07,99;UBERON:0001949,5.83e-07,3;UBERON:0001041,6.99e-07,87;UBERON:0005181,8.26e-07,35 | |||
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| ||
|short_description=p1@KLK7 | |||
}} | }} |
Latest revision as of 13:36, 19 September 2015
Short description: | p1@KLK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLK7_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000304045, uc002pup.2, uc010eok.2, uc010yco.1_5end |
EntrezGene: | KLK7 |
HGNC: | 6368 |
UniProt: | P49862 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.97e-21 | 42 |
epithelial cell | 2.14e-14 | 253 |
endodermal cell | 1.58e-13 | 58 |
respiratory epithelial cell | 7.23e-12 | 13 |
kidney tubule cell | 8.10e-12 | 10 |
nephron tubule epithelial cell | 8.10e-12 | 10 |
acinar cell | 2.51e-10 | 5 |
general ecto-epithelial cell | 2.98e-10 | 14 |
epithelial cell of alimentary canal | 1.09e-09 | 20 |
epithelial cell of nephron | 4.12e-09 | 15 |
conventional dendritic cell | 5.92e-09 | 8 |
Langerhans cell | 8.78e-09 | 5 |
protein secreting cell | 1.64e-08 | 6 |
glandular epithelial cell | 7.11e-08 | 9 |
kidney cell | 8.22e-08 | 17 |
kidney epithelial cell | 8.22e-08 | 17 |
dendritic cell | 4.01e-07 | 10 |
acinar cell of salivary gland | 5.27e-07 | 3 |
gingival epithelial cell | 5.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.57e-13 | 74 |
oral opening | 4.16e-12 | 22 |
nephron tubule epithelium | 8.10e-12 | 10 |
saliva-secreting gland | 1.04e-10 | 6 |
gland of oral region | 1.04e-10 | 6 |
gland of foregut | 1.04e-10 | 6 |
oral gland | 1.04e-10 | 6 |
oral cavity | 1.04e-10 | 6 |
excretory tube | 3.67e-10 | 16 |
kidney epithelium | 3.67e-10 | 16 |
mouth | 1.14e-09 | 29 |
stomodeum | 1.14e-09 | 29 |
nephron epithelium | 4.12e-09 | 15 |
renal tubule | 4.12e-09 | 15 |
nephron tubule | 4.12e-09 | 15 |
nephron | 4.12e-09 | 15 |
uriniferous tubule | 4.12e-09 | 15 |
nephrogenic mesenchyme | 4.12e-09 | 15 |
orifice | 1.38e-08 | 36 |
endoderm-derived structure | 7.60e-08 | 160 |
endoderm | 7.60e-08 | 160 |
presumptive endoderm | 7.60e-08 | 160 |
head | 1.90e-07 | 56 |
anterior region of body | 3.41e-07 | 62 |
craniocervical region | 3.41e-07 | 62 |
subdivision of head | 4.62e-07 | 49 |
surface structure | 5.03e-07 | 99 |
gingival epithelium | 5.83e-07 | 3 |
foregut | 6.99e-07 | 87 |
thoracic segment organ | 8.26e-07 | 35 |