FFCP PHASE1:Hg19::chr2:202562716..202562727,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202562716..202562727,- to FFCP PHASE1:Hg19::chr2:202562716..202562727,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET46 | |UniProt=E7ET46 | ||
|association_with_transcript=0bp_to_ENST00000428900_5end | |||
|cluster_id=chr2:202562716..202562727,- | |||
|description=CAGE_peak_4_at_MPP4_5end | |||
|id=chr2:202562716..202562727,- | |||
|ontology_enrichment_celltype=CL:0000222!1.41e-27!119;CL:0000055!2.85e-21!180;CL:0000680!3.17e-18!57;CL:0000056!3.17e-18!57;CL:0000355!3.17e-18!57;CL:0000192!5.32e-18!42;CL:0000514!5.32e-18!42;CL:0000359!8.14e-18!32;CL:0002139!1.58e-17!24;CL:0000187!9.23e-16!54;CL:0000115!1.41e-15!35;CL:0000183!7.69e-15!59;CL:0000220!2.31e-14!246;CL:0002321!4.70e-14!248;CL:0000393!4.82e-14!60;CL:0000211!4.82e-14!60;CL:0000213!7.22e-12!57;CL:0000215!7.22e-12!57;CL:0002078!9.20e-12!44;CL:0000071!1.80e-11!18;CL:0002546!1.80e-11!18;CL:0000144!1.17e-10!625;CL:0002371!1.66e-10!591;CL:0002539!3.07e-10!10;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!2.19e-09!682;CL:1000413!9.66e-09!9;CL:0005020!5.22e-08!6;CL:0002138!5.22e-08!6;CL:0005022!5.22e-08!6;CL:0002620!1.55e-07!23;CL:0002595!2.00e-07!5;CL:0000057!6.92e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.31e-16;36!CL:0002595;4.04e-14;5!CL:0000359;8.35e-14;32!CL:0002139;4.59e-13;24!CL:0002539;9.47e-11;10!CL:0002583;8.02e-10;2!CL:0002593;2.00e-09;2!CL:0000213;4.71e-09;58!CL:0000215;4.71e-09;58!CL:0000192;8.77e-09;43!CL:0002078;1.74e-08;45!CL:0002188;2.18e-08;5!CL:0000071;4.02e-08;18!CL:1000413;5.27e-08;9!CL:0000708;2.80e-07;3!CL:0002544;3.00e-07;6!CL:0002138;4.68e-07;6!CL:0000515;8.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.73e-21,121;CL:0000115,1.37e-17,36;CL:0000359,3.41e-14,32;CL:0002595,1.09e-13,5;CL:0002078,1.68e-13,45;CL:0000213,2.38e-13,58;CL:0000215,2.38e-13,58;CL:0002139,3.03e-13,24;CL:0002539,7.74e-11,10;CL:0000192,5.35e-10,43;CL:0000514,5.35e-10,43;CL:0000680,7.40e-10,58;CL:0000056,7.40e-10,58;CL:0000355,7.40e-10,58;CL:0002583,1.20e-09,2;CL:0002593,4.71e-09,2;CL:0002321,1.50e-08,250;CL:0002188,2.43e-08,5;CL:0000071,3.01e-08,18;CL:0002546,3.01e-08,18;CL:1000413,5.81e-08,9;CL:0000187,2.37e-07,55;CL:0002544,2.43e-07,6;CL:0000708,2.85e-07,3;CL:0005020,4.14e-07,6;CL:0002138,4.14e-07,6;CL:0005022,4.14e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.77e-09;43!CL:0002546;4.02e-08;18!CL:0005022;4.68e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.28e-07,3;DOID:127,9.28e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.67e-32!79;UBERON:0007798!1.67e-32!79;UBERON:0000055!4.64e-28!69;UBERON:0001637!2.08e-24!42;UBERON:0003509!2.08e-24!42;UBERON:0004572!2.08e-24!42;UBERON:0001981!2.47e-24!60;UBERON:0007500!2.47e-24!60;UBERON:0004537!2.47e-24!60;UBERON:0006965!2.47e-24!60;UBERON:0004535!5.08e-21!110;UBERON:0004872!1.24e-20!84;UBERON:0001009!5.63e-20!113;UBERON:0004573!7.31e-20!33;UBERON:0004571!7.31e-20!33;UBERON:0004290!3.23e-18!70;UBERON:0001134!2.91e-16!61;UBERON:0002036!2.91e-16!61;UBERON:0003082!2.91e-16!61;UBERON:0000914!4.32e-16!83;UBERON:0002329!4.32e-16!83;UBERON:0003077!4.32e-16!83;UBERON:0003059!4.32e-16!83;UBERON:0007282!4.32e-16!83;UBERON:0009618!4.32e-16!83;UBERON:0007285!4.32e-16!83;UBERON:0002385!2.21e-15!63;UBERON:0001015!2.21e-15!63;UBERON:0000383!2.21e-15!63;UBERON:0000490!6.44e-15!138;UBERON:0000947!7.46e-15!21;UBERON:0010191!7.46e-15!21;UBERON:0000486!1.73e-14!82;UBERON:0001986!1.80e-11!18;UBERON:0004638!1.80e-11!18;UBERON:0004852!1.80e-11!18;UBERON:0003914!3.13e-11!118;UBERON:0001135!2.41e-10!15;UBERON:0004237!3.07e-10!10;UBERON:0004695!3.07e-10!10;UBERON:0002111!3.07e-10!10;UBERON:0004178!3.07e-10!10;UBERON:0000487!3.23e-10!22;UBERON:0006914!1.43e-09!25;UBERON:0003915!9.66e-09!9;UBERON:0004700!9.66e-09!9;UBERON:0001917!9.66e-09!9;UBERON:0005256!2.19e-08!143;UBERON:0003834!2.00e-07!5;UBERON:0001533!2.00e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.27e-22;33!UBERON:0004571;6.27e-22;33!UBERON:0001637;3.19e-17;42!UBERON:0003509;3.19e-17;42!UBERON:0004572;3.19e-17;42!UBERON:0003513;2.90e-15;7!UBERON:0003834;4.04e-14;5!UBERON:0001533;4.04e-14;5!UBERON:0000947;3.58e-12;21!UBERON:0010191;3.58e-12;21!UBERON:0000055;4.01e-11;65!UBERON:0004237;9.47e-11;10!UBERON:0004695;9.47e-11;10!UBERON:0002111;9.47e-11;10!UBERON:0004178;9.47e-11;10!UBERON:0007500;2.50e-10;56!UBERON:0001981;2.50e-10;56!UBERON:0004537;2.50e-10;56!UBERON:0002456;2.00e-09;2!UBERON:0000487;1.01e-08;22!UBERON:0003914;2.49e-08;74!UBERON:0004638;4.02e-08;18!UBERON:0001986;4.02e-08;18!UBERON:0004852;4.02e-08;18!UBERON:0003915;5.27e-08;9!UBERON:0004700;5.27e-08;9!UBERON:0001917;5.27e-08;9!UBERON:0006914;1.46e-07;25!UBERON:0003210;2.80e-07;3!UBERON:0001135;4.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.85e-23,68;UBERON:0004573,7.53e-23,33;UBERON:0004571,7.53e-23,33;UBERON:0001637,7.72e-20,42;UBERON:0003509,7.72e-20,42;UBERON:0004572,7.72e-20,42;UBERON:0007500,1.37e-19,59;UBERON:0001981,1.37e-19,59;UBERON:0004537,1.37e-19,59;UBERON:0006965,1.37e-19,59;UBERON:0002049,1.58e-19,78;UBERON:0007798,1.58e-19,78;UBERON:0004872,6.44e-18,83;UBERON:0003513,7.01e-15,7;UBERON:0004535,5.86e-14,109;UBERON:0003834,1.09e-13,5;UBERON:0001533,1.09e-13,5;UBERON:0001009,1.90e-13,112;UBERON:0003914,1.27e-12,117;UBERON:0000947,2.64e-12,21;UBERON:0010191,2.64e-12,21;UBERON:0007503,4.52e-12,78;UBERON:0004237,7.74e-11,10;UBERON:0004695,7.74e-11,10;UBERON:0002111,7.74e-11,10;UBERON:0004178,7.74e-11,10;UBERON:0000490,4.45e-10,148;UBERON:0002456,4.71e-09,2;UBERON:0001134,4.79e-09,62;UBERON:0002036,4.79e-09,62;UBERON:0003082,4.79e-09,62;UBERON:0002329,7.10e-09,71;UBERON:0003059,7.10e-09,71;UBERON:0007282,7.10e-09,71;UBERON:0004290,7.10e-09,71;UBERON:0009618,7.10e-09,71;UBERON:0000487,7.15e-09,22;UBERON:0003077,1.04e-08,72;UBERON:0007285,1.04e-08,72;UBERON:0002385,1.11e-08,64;UBERON:0001015,1.11e-08,64;UBERON:0000383,1.11e-08,64;UBERON:0007524,1.50e-08,73;UBERON:0005256,2.40e-08,122;UBERON:0004638,3.01e-08,18;UBERON:0001986,3.01e-08,18;UBERON:0004852,3.01e-08,18;UBERON:0000926,3.40e-08,315;UBERON:0004120,3.40e-08,315;UBERON:0006603,3.40e-08,315;UBERON:0003915,5.81e-08,9;UBERON:0004700,5.81e-08,9;UBERON:0001917,5.81e-08,9;UBERON:0006914,1.08e-07,25;UBERON:0003081,2.28e-07,203;UBERON:0003210,2.85e-07,3;UBERON:0000486,3.57e-07,83;UBERON:0001135,4.03e-07,15 | |||
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| ||
|short_description=p4@MPP4 | |||
}} | }} |
Latest revision as of 13:47, 19 September 2015
Short description: | p4@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428900_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | E7ET46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.73e-21 | 121 |
endothelial cell | 1.37e-17 | 36 |
vascular associated smooth muscle cell | 3.41e-14 | 32 |
smooth muscle cell of the subclavian artery | 1.09e-13 | 5 |
meso-epithelial cell | 1.68e-13 | 45 |
lining cell | 2.38e-13 | 58 |
barrier cell | 2.38e-13 | 58 |
endothelial cell of vascular tree | 3.03e-13 | 24 |
aortic smooth muscle cell | 7.74e-11 | 10 |
smooth muscle cell | 5.35e-10 | 43 |
smooth muscle myoblast | 5.35e-10 | 43 |
muscle precursor cell | 7.40e-10 | 58 |
myoblast | 7.40e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.40e-10 | 58 |
subcutaneous preadipocyte | 1.20e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 4.71e-09 | 2 |
embryonic cell | 1.50e-08 | 250 |
glomerular endothelial cell | 2.43e-08 | 5 |
blood vessel endothelial cell | 3.01e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-08 | 18 |
endothelial cell of artery | 5.81e-08 | 9 |
muscle cell | 2.37e-07 | 55 |
aortic endothelial cell | 2.43e-07 | 6 |
leptomeningeal cell | 2.85e-07 | 3 |
lymphangioblast | 4.14e-07 | 6 |
endothelial cell of lymphatic vessel | 4.14e-07 | 6 |
vascular lymphangioblast | 4.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.28e-07 | 3 |
leiomyoma | 9.28e-07 | 3 |