FFCP PHASE1:Hg19::chr1:86889803..86889833,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9635 | |EntrezGene=9635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2016 | |HGNC=2016 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQC9,E7EUD9 | |UniProt=Q9UQC9,E7EUD9 | ||
|association_with_transcript=34bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | |association_with_transcript=34bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | ||
|cluster_id=chr1:86889803..86889833,+ | |||
|coexpression_cluster_id=C2603 | |||
|description=CAGE_peak_2_at_CLCA2_5end | |description=CAGE_peak_2_at_CLCA2_5end | ||
|id=chr1:86889803..86889833,+ | |id=chr1:86889803..86889833,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.15e-17!43;CL:0000066!5.18e-12!254;CL:0002159!9.96e-12!13;CL:0002251!4.47e-11!21;CL:0000223!8.40e-11!59;CL:0002077!1.69e-09!33;CL:0000076!2.63e-09!62;CL:0002368!3.88e-09!13;CL:0000622!1.17e-07!5;CL:0000197!3.48e-07!6;CL:0000098!3.48e-07!6;CL:0002167!3.48e-07!6 | |ontology_enrichment_celltype=CL:0002076!5.15e-17!43;CL:0000066!5.18e-12!254;CL:0002159!9.96e-12!13;CL:0002251!4.47e-11!21;CL:0000223!8.40e-11!59;CL:0002077!1.69e-09!33;CL:0000076!2.63e-09!62;CL:0002368!3.88e-09!13;CL:0000622!1.17e-07!5;CL:0000197!3.48e-07!6;CL:0000098!3.48e-07!6;CL:0002167!3.48e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.13e-20;42!CL:0002159;2.37e-19;14!CL:0002368;2.46e-16;13!CL:0002251;1.55e-14;20!CL:0000622;1.31e-12;5!CL:0002327;1.65e-10;4!CL:0002077;1.84e-10;34!CL:0000154;2.03e-10;6!CL:0000362;1.94e-09;9!CL:0000244;2.46e-09;4!CL:0000731;2.46e-09;4!CL:0002621;1.02e-08;3!CL:0002166;1.04e-08;3!CL:0002202;1.26e-08;9!CL:0002632;1.26e-08;9!CL:0002623;5.58e-08;3!CL:0000307;9.62e-08;3!CL:0002328;2.90e-07;3!CL:0000240;5.27e-07;6!CL:0000311;5.27e-07;6!CL:0000079;5.27e-07;6!CL:0000237;5.27e-07;6!CL:0000150;9.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.22e-26,42;CL:0002159,2.42e-19,14;CL:0000223,1.32e-18,58;CL:0002368,2.47e-16,13;CL:0000066,5.61e-16,253;CL:0002251,1.53e-14,20;CL:0000622,1.31e-12,5;CL:0002077,3.12e-12,34;CL:0002327,1.63e-10,4;CL:0000154,2.03e-10,6;CL:0000362,1.95e-09,9;CL:0000244,2.81e-09,4;CL:0000731,2.81e-09,4;CL:0002621,1.02e-08,3;CL:0002166,1.04e-08,3;CL:0002202,1.28e-08,9;CL:0002632,1.28e-08,9;CL:0002623,5.58e-08,3;CL:0000068,9.73e-08,3;CL:0000069,9.73e-08,3;CL:0000307,9.73e-08,3;CL:0000377,9.73e-08,3;CL:0000076,2.37e-07,63;CL:0002328,2.93e-07,3;CL:0000240,5.27e-07,6;CL:0000311,5.27e-07,6;CL:0000079,5.27e-07,6;CL:0000237,5.27e-07,6;CL:0000036,5.27e-07,6;CL:0000357,5.27e-07,6;CL:0000114,5.27e-07,6;CL:0002321,8.30e-07,250;CL:0000150,9.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.41e-10;58!CL:0000377;9.62e-08;3!CL:0000357;5.27e-07;6!CL:0000114;5.27e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.01e-08!14 | |ontology_enrichment_disease=DOID:1749!1.01e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.77e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000165!1.10e-17!28;UBERON:0000930!1.10e-17!28;UBERON:0003102!1.36e-16!95;UBERON:0000166!2.51e-16!21;UBERON:0000161!1.01e-14!35;UBERON:0001004!4.13e-14!72;UBERON:0001444!3.88e-10!48;UBERON:0001828!1.26e-09!8;UBERON:0004119!1.47e-09!169;UBERON:0000925!1.47e-09!169;UBERON:0006595!1.47e-09!169;UBERON:0000065!9.87e-07!53 | |ontology_enrichment_uberon=UBERON:0000165!1.10e-17!28;UBERON:0000930!1.10e-17!28;UBERON:0003102!1.36e-16!95;UBERON:0000166!2.51e-16!21;UBERON:0000161!1.01e-14!35;UBERON:0001004!4.13e-14!72;UBERON:0001444!3.88e-10!48;UBERON:0001828!1.26e-09!8;UBERON:0004119!1.47e-09!169;UBERON:0000925!1.47e-09!169;UBERON:0006595!1.47e-09!169;UBERON:0000065!9.87e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.43e-15;28!UBERON:0000161;2.06e-15;19!UBERON:0000166;2.06e-15;19!UBERON:0003729;2.22e-13;13!UBERON:0000486;2.20e-11;12!UBERON:0001911;1.65e-10;4!UBERON:0001828;3.65e-10;8!UBERON:0000344;5.85e-10;20!UBERON:0001003;5.83e-09;15!UBERON:0007376;5.83e-09;15!UBERON:0001949;1.02e-08;3!UBERON:0000365;1.85e-07;5!UBERON:0004815;2.90e-07;3!UBERON:0002031;2.90e-07;3!UBERON:0010371;5.29e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.88e-18,99;UBERON:0000166,6.89e-18,22;UBERON:0000165,7.14e-15,29;UBERON:0000930,7.14e-15,29;UBERON:0000161,1.24e-14,36;UBERON:0001004,2.89e-14,74;UBERON:0003729,2.38e-13,13;UBERON:0000033,7.95e-12,56;UBERON:0000153,2.06e-11,62;UBERON:0007811,2.06e-11,62;UBERON:0001911,1.63e-10,4;UBERON:0005333,1.63e-10,4;UBERON:0008425,1.63e-10,4;UBERON:0005311,1.63e-10,4;UBERON:0004119,2.23e-10,160;UBERON:0000925,2.23e-10,160;UBERON:0006595,2.23e-10,160;UBERON:0001828,4.07e-10,8;UBERON:0000344,6.17e-10,20;UBERON:0001444,1.35e-09,49;UBERON:0001003,5.77e-09,15;UBERON:0007376,5.77e-09,15;UBERON:0007383,5.77e-09,15;UBERON:0001949,1.02e-08,3;UBERON:0000365,2.06e-07,5;UBERON:0004815,2.93e-07,3;UBERON:0002031,2.93e-07,3 | |||
|phase1_expression=0.181678379270557,2.14100523890983,1.26858963686374,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,3.67768489791571,5.12050061923025,9.61360426433648,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,4.37154345951051,12.977455497455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0.12663051166458,2.51577443545116,3.72887606973458,0.354668382198357,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,2.24569588380383,0.245668634623536,3.09977343527296,2.37600571456411,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0.276149695926898,7.27407255684654,0.710019185033229,0,0,122.140859199204,154.101558133822,99.2343900045953,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,3.60939740834793,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.0324529255328,19.1082980537953,38.402067461243,126.383227641393,0,0,0,0,0,0,0,0,0,0,0,0,0,119.041969163207,167.310199686064,88.4676606792492,53.3768795308976,36.3292423142452,14.568541808278,0,0,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,0.630809660135739,3.27995961979597,0,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0.710246901252508,0,0,0,0,114.288688072872,42.63349787732,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,132.08107373912,65.6560848496886,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,55.3704466459277,29.7894604415915,26.4158314863789,30.4484920375205,0,1.25924938732256,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,0.658589785919804,0,0,30.2137433958108,11.3951386841084,10.8890984861323,0.659006605437454,2.15252686335615,5.05414427002877,5.76459199597678,55.3633394498772,0,0,0,0,0,0,0,0,0,0.962479855263359,12.9871314469947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.890894042497916,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0.260427761085233,211.653199990794,0,3.75518379342149,0,4.96414131712666,0,0,0,0,0,0,0,0,0,0.21787692703798,21.8895278517407,12.1581408435999,0,0.69169171316418,2.42345639906385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,7.54541460090708,6.35532208036939,0.698906672968121,0,0.19351266257817,0.0730893170861856,0.164230914106418,44.6149475846729,0,1.58186518546373,0.137041924646751,0,0,0,0,0,2.39771531498556,0,0,0,0,0,6.12804490003668,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.1941065874158,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,0,2.5926644736038,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,18.5118964753353,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,2.76724691927833,8.00830099436882,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.857766365499703,0,0,0,0,0.71635536432595,0.308801447160972,1.75427239662966,0.176689145945881,0.578742114812744,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9462638800167,37.9467128620113,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,5.98701082856256,0.353909170043221,43.2891492511162,0.693153996902029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45832296228224,0.175871244359621,1.02209942111676,0,0,0,0,0.975726071789027,0,0,0,0,0,0,1.33438257845874,0,0,0,0,0,0,0,0,0,0,70.4534958154325,45.9232703382725,4.83881763269864,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,15.5427517778925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,1.11598505450025,1.84870251452567,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,13.6469748416628,0.23806443146374,0.322944549180031,0.31037357147929,0,0,0,20.6830910502113,13.6893320434112,14.5480434511509,12.6948303545037,0.332660356546013,0.488419611665847,0,0,0,2.34640942403454,0.488965776731466,6.91723503136755,0,0.201273793591026,0 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| ||
|short_description=p2@CLCA2 | |short_description=p2@CLCA2 | ||
}} | }} |
Latest revision as of 14:20, 19 September 2015
Short description: | p2@CLCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCA2_5end |
Coexpression cluster: | C2603_breast_Mallassezderived_Gingival_Sebocyte_Keratinocyte_keratoacanthoma_Prostate |
Association with transcript: | 34bp_to_ENST00000370565, ENST00000439777, NM_006536, uc001dlr.3_5end |
EntrezGene: | CLCA2 |
HGNC: | 2016 |
UniProt: | Q9UQC9E7EUD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 2.88e-18 | 99 |
oral opening | 6.89e-18 | 22 |
mouth | 7.14e-15 | 29 |
stomodeum | 7.14e-15 | 29 |
orifice | 1.24e-14 | 36 |
respiratory system | 2.89e-14 | 74 |
mouth mucosa | 2.38e-13 | 13 |
head | 7.95e-12 | 56 |
anterior region of body | 2.06e-11 | 62 |
craniocervical region | 2.06e-11 | 62 |
mammary gland | 1.63e-10 | 4 |
mammary bud | 1.63e-10 | 4 |
mammary ridge | 1.63e-10 | 4 |
mammary placode | 1.63e-10 | 4 |
endoderm-derived structure | 2.23e-10 | 160 |
endoderm | 2.23e-10 | 160 |
presumptive endoderm | 2.23e-10 | 160 |
gingiva | 4.07e-10 | 8 |
mucosa | 6.17e-10 | 20 |
subdivision of head | 1.35e-09 | 49 |
skin epidermis | 5.77e-09 | 15 |
outer epithelium | 5.77e-09 | 15 |
enveloping layer of ectoderm | 5.77e-09 | 15 |
gingival epithelium | 1.02e-08 | 3 |
urothelium | 2.06e-07 | 5 |
lower respiratory tract epithelium | 2.93e-07 | 3 |
epithelium of bronchus | 2.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.77e-07 | 14 |