FFCP PHASE1:Hg19::chr6:107235287..107235303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422737 | |EntrezGene=100422737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436659,NR_033557,uc003pro.1_5end | |association_with_transcript=0bp_to_ENST00000436659,NR_033557,uc003pro.1_5end | ||
|cluster_id=chr6:107235287..107235303,- | |||
|coexpression_cluster_id=C4540 | |coexpression_cluster_id=C4540 | ||
|description=CAGE_peak_2_at_LOC100422737_5end | |description=CAGE_peak_2_at_LOC100422737_5end | ||
|id=chr6:107235287..107235303,- | |id=chr6:107235287..107235303,- | ||
|ontology_enrichment_celltype=CL:0000181!2.31e-22!12;CL:0000417!2.31e-22!12;CL:0000668!2.31e-22!12;CL:0000414!2.31e-22!12;CL:0000412!2.31e-22!12;CL:0000182!2.31e-22!12;CL:0000239!2.80e-08!3;CL:1000615!2.80e-08!3;CL:0002306!2.80e-08!3;CL:0000223!1.03e-07!59;CL:0000313!2.09e-07!1 | |ontology_enrichment_celltype=CL:0000181!2.31e-22!12;CL:0000417!2.31e-22!12;CL:0000668!2.31e-22!12;CL:0000414!2.31e-22!12;CL:0000412!2.31e-22!12;CL:0000182!2.31e-22!12;CL:0000239!2.80e-08!3;CL:1000615!2.80e-08!3;CL:0002306!2.80e-08!3;CL:0000223!1.03e-07!59;CL:0000313!2.09e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.41e-14;12!CL:0000313;2.63e-12;1!CL:0000159;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.37e-14,12;CL:0000313,2.63e-12,1;CL:0000159,8.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.78e-17;10!UBERON:0007687;3.78e-17;10!UBERON:0003104;9.78e-16;31!UBERON:0006242;4.53e-12;1!UBERON:0004161;2.98e-09;11!UBERON:0009497;6.63e-08;13 | |||
|ontology_enrichment_disease=DOID:305!1.71e-07!106;DOID:2152!2.09e-07!1 | |ontology_enrichment_disease=DOID:305!1.71e-07!106;DOID:2152!2.09e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;2.63e-12;1!DOID:3493;9.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.63e-12,1;DOID:3493,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.17e-23!55;UBERON:0005173!5.17e-23!55;UBERON:0009497!6.65e-21!25;UBERON:0000015!6.65e-21!25;UBERON:0002423!6.65e-21!25;UBERON:0006235!6.65e-21!25;UBERON:0004161!6.65e-21!25;UBERON:0002417!2.08e-20!61;UBERON:0000916!2.08e-20!61;UBERON:0008835!2.53e-19!22;UBERON:0003894!2.53e-19!22;UBERON:0009854!2.04e-18!23;UBERON:0002107!5.07e-18!19;UBERON:0006925!5.07e-18!19;UBERON:0008836!5.07e-18!19;UBERON:0007499!8.01e-17!25;UBERON:0009856!4.06e-16!26;UBERON:0005177!5.57e-15!107;UBERON:0005057!7.65e-13!26;UBERON:0009569!7.51e-11!113;UBERON:0002365!1.42e-10!31;UBERON:0002330!1.42e-10!31;UBERON:0003929!1.50e-10!54;UBERON:0000466!1.59e-10!126;UBERON:0000489!4.76e-10!32;UBERON:0002113!1.97e-09!27;UBERON:0003918!1.97e-09!27;UBERON:0005095!1.97e-09!27;UBERON:0007687!1.97e-09!27;UBERON:0002368!3.15e-09!35;UBERON:0000949!8.61e-09!45;UBERON:0006853!2.80e-08!3;UBERON:0007685!2.80e-08!3;UBERON:0004134!2.80e-08!3;UBERON:0005911!1.53e-07!82;UBERON:0004911!2.09e-07!1;UBERON:0006554!5.50e-07!44;UBERON:0001008!8.34e-07!45 | |ontology_enrichment_uberon=UBERON:0005172!5.17e-23!55;UBERON:0005173!5.17e-23!55;UBERON:0009497!6.65e-21!25;UBERON:0000015!6.65e-21!25;UBERON:0002423!6.65e-21!25;UBERON:0006235!6.65e-21!25;UBERON:0004161!6.65e-21!25;UBERON:0002417!2.08e-20!61;UBERON:0000916!2.08e-20!61;UBERON:0008835!2.53e-19!22;UBERON:0003894!2.53e-19!22;UBERON:0009854!2.04e-18!23;UBERON:0002107!5.07e-18!19;UBERON:0006925!5.07e-18!19;UBERON:0008836!5.07e-18!19;UBERON:0007499!8.01e-17!25;UBERON:0009856!4.06e-16!26;UBERON:0005177!5.57e-15!107;UBERON:0005057!7.65e-13!26;UBERON:0009569!7.51e-11!113;UBERON:0002365!1.42e-10!31;UBERON:0002330!1.42e-10!31;UBERON:0003929!1.50e-10!54;UBERON:0000466!1.59e-10!126;UBERON:0000489!4.76e-10!32;UBERON:0002113!1.97e-09!27;UBERON:0003918!1.97e-09!27;UBERON:0005095!1.97e-09!27;UBERON:0007687!1.97e-09!27;UBERON:0002368!3.15e-09!35;UBERON:0000949!8.61e-09!45;UBERON:0006853!2.80e-08!3;UBERON:0007685!2.80e-08!3;UBERON:0004134!2.80e-08!3;UBERON:0005911!1.53e-07!82;UBERON:0004911!2.09e-07!1;UBERON:0006554!5.50e-07!44;UBERON:0001008!8.34e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;7.41e-15;25!UBERON:0002107;8.03e-14;19!UBERON:0006925;8.03e-14;19!UBERON:0005172;9.97e-13;52!UBERON:0005173;9.97e-13;52!UBERON:0004911;2.63e-12;1!UBERON:0002365;1.03e-08;31!UBERON:0002330;1.03e-08;31!UBERON:0002417;1.67e-08;58!UBERON:0000916;1.67e-08;58!UBERON:0002113;2.90e-07;24!UBERON:0011143;2.90e-07;24!UBERON:0002368;4.68e-07;33!UBERON:0004909;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.57e-18,54;UBERON:0005173,3.57e-18,54;UBERON:0002417,3.20e-16,60;UBERON:0000916,3.20e-16,60;UBERON:0009497,7.23e-15,25;UBERON:0000015,7.23e-15,25;UBERON:0002423,7.23e-15,25;UBERON:0006235,7.23e-15,25;UBERON:0004161,7.23e-15,25;UBERON:0002107,7.82e-14,19;UBERON:0006925,7.82e-14,19;UBERON:0008836,7.82e-14,19;UBERON:0005177,2.95e-13,101;UBERON:0004911,2.63e-12,1;UBERON:0008835,6.17e-12,22;UBERON:0003894,6.17e-12,22;UBERON:0009854,2.06e-11,23;UBERON:0007499,1.72e-10,25;UBERON:0009856,4.39e-10,26;UBERON:0009569,8.83e-10,112;UBERON:0002365,1.95e-08,31;UBERON:0002330,1.95e-08,31;UBERON:0000949,4.36e-08,45;UBERON:0002368,1.87e-07,35;UBERON:0004909,8.93e-07,2 | |||
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|short_description=p2@LOC100422737 | |short_description=p2@LOC100422737 | ||
}} | }} |
Latest revision as of 16:07, 19 September 2015
Short description: | p2@LOC100422737 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100422737_5end |
Coexpression cluster: | C4540_serous_renal_Hepatocyte_signet_gall_liver_kidney |
Association with transcript: | 0bp_to_ENST00000436659, NR_033557, uc003pro.1_5end |
EntrezGene: | LOC100422737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.37e-14 | 12 |
serous secreting cell | 2.63e-12 | 1 |
seromucus secreting cell | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.57e-18 | 54 |
abdominal segment element | 3.57e-18 | 54 |
abdominal segment of trunk | 3.20e-16 | 60 |
abdomen | 3.20e-16 | 60 |
epithelium of foregut-midgut junction | 7.23e-15 | 25 |
anatomical boundary | 7.23e-15 | 25 |
hepatobiliary system | 7.23e-15 | 25 |
foregut-midgut junction | 7.23e-15 | 25 |
septum transversum | 7.23e-15 | 25 |
liver | 7.82e-14 | 19 |
digestive gland | 7.82e-14 | 19 |
liver bud | 7.82e-14 | 19 |
trunk region element | 2.95e-13 | 101 |
epithelium of female gonad | 2.63e-12 | 1 |
hepatic diverticulum | 6.17e-12 | 22 |
liver primordium | 6.17e-12 | 22 |
digestive tract diverticulum | 2.06e-11 | 23 |
epithelial sac | 1.72e-10 | 25 |
sac | 4.39e-10 | 26 |
subdivision of trunk | 8.83e-10 | 112 |
exocrine gland | 1.95e-08 | 31 |
exocrine system | 1.95e-08 | 31 |
endocrine system | 4.36e-08 | 45 |
endocrine gland | 1.87e-07 | 35 |
epithelium of gonad | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.63e-12 | 1 |
signet ring cell adenocarcinoma | 9.44e-07 | 2 |