FFCP PHASE1:Hg19::chr3:9234204..9234209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40899 | |HGNC=40899 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000450920,uc003brl.2_5end | |association_with_transcript=-9bp_to_ENST00000450920,uc003brl.2_5end | ||
|cluster_id=chr3:9234204..9234209,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_3_at_SRGAP3-AS2_5end | |description=CAGE_peak_3_at_SRGAP3-AS2_5end | ||
|id=chr3:9234204..9234209,+ | |id=chr3:9234204..9234209,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.74e-15;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!5.00e-45!2;UBERON:0002171!1.67e-23!1;UBERON:0006518!1.67e-23!1;UBERON:0008949!1.67e-23!1;UBERON:0000101!1.67e-23!1;UBERON:0002167!1.67e-23!1;UBERON:0005178!1.60e-16!34;UBERON:0002224!1.60e-16!34;UBERON:0005181!4.66e-16!35;UBERON:0008947!8.26e-15!38;UBERON:0003258!8.26e-15!38;UBERON:0003126!1.15e-13!7;UBERON:0001005!1.15e-13!7;UBERON:0000341!2.59e-12!2;UBERON:0000915!7.11e-11!52;UBERON:0000065!1.13e-10!53;UBERON:0002048!8.86e-10!22;UBERON:0000117!8.86e-10!22;UBERON:0000171!8.86e-10!22;UBERON:0000170!8.86e-10!22;UBERON:0005597!8.86e-10!22;UBERON:0000118!8.86e-10!22;UBERON:0001004!6.89e-08!72;UBERON:0007196!2.68e-07!14;UBERON:0001558!2.68e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.52e-50;2!UBERON:0003126;1.78e-15;7!UBERON:0001005;1.78e-15;7!UBERON:0005178;1.58e-09;34!UBERON:0002224;1.58e-09;34!UBERON:0007196;5.74e-08;15!UBERON:0001558;5.74e-08;15!UBERON:0000065;3.42e-07;44!UBERON:0000915;7.94e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.52e-50,2;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0005178,6.62e-13,34;UBERON:0002224,6.62e-13,34;UBERON:0005181,1.42e-12,35;UBERON:0008947,1.10e-11,38;UBERON:0003258,1.10e-11,38;UBERON:0000915,6.99e-09,52;UBERON:0000065,1.34e-08,54;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p3@SRGAP3-AS2 | |short_description=p3@SRGAP3-AS2 | ||
}} | }} |
Latest revision as of 19:35, 19 September 2015
Short description: | p3@SRGAP3-AS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRGAP3-AS2_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -9bp_to_ENST00000450920, uc003brl.2_5end |
EntrezGene: | NA |
HGNC: | 40899 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.52e-50 | 2 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
thoracic cavity element | 6.62e-13 | 34 |
thoracic cavity | 6.62e-13 | 34 |
thoracic segment organ | 1.42e-12 | 35 |
respiratory primordium | 1.10e-11 | 38 |
endoderm of foregut | 1.10e-11 | 38 |
thoracic segment of trunk | 6.99e-09 | 52 |
respiratory tract | 1.34e-08 | 54 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |