FFCP PHASE1:Hg19::chr10:90424196..90424203,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8513 | |EntrezGene=8513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6622 | |HGNC=6622 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1P4 | |UniProt=F5H1P4 | ||
|association_with_transcript=0bp_to_ENST00000394375_5end | |association_with_transcript=0bp_to_ENST00000394375_5end | ||
|cluster_id=chr10:90424196..90424203,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_1_at_LIPF_5end | |description=CAGE_peak_1_at_LIPF_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.15e-26;1!UBERON:0008801;7.62e-26;1!UBERON:0006965;1.46e-13;2 | |ontology_enrichment_development_v019=UBERON:0009143;3.15e-26;1!UBERON:0008801;7.62e-26;1!UBERON:0006965;1.46e-13;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!8.62e-21!2;UBERON:0002780!2.46e-14!41;UBERON:0001890!2.46e-14!41;UBERON:0006240!2.46e-14!41;UBERON:0003080!5.58e-14!42;UBERON:0002336!1.18e-11!1;UBERON:0001018!1.18e-11!1;UBERON:0002473!1.18e-11!1;UBERON:0005340!1.18e-11!1;UBERON:0002316!1.18e-11!1;UBERON:0003544!1.18e-11!1;UBERON:0001020!1.18e-11!1;UBERON:0005970!1.18e-11!1;UBERON:0002437!1.18e-11!1;UBERON:0001831!1.45e-11!1;UBERON:0001567!1.45e-11!1;UBERON:0008801!1.45e-11!1;UBERON:0001882!2.96e-11!1;UBERON:0005403!2.96e-11!1;UBERON:0003296!6.99e-11!4;UBERON:0010133!6.99e-11!4;UBERON:0000153!8.06e-11!129;UBERON:0007811!8.06e-11!129;UBERON:0007023!1.17e-10!115;UBERON:0002370!1.40e-10!4;UBERON:0005058!1.40e-10!4;UBERON:0009113!1.40e-10!4;UBERON:0003295!1.40e-10!4;UBERON:0005562!1.40e-10!4;UBERON:0002791!2.82e-10!33;UBERON:0001049!4.05e-10!57;UBERON:0005068!4.05e-10!57;UBERON:0006241!4.05e-10!57;UBERON:0007135!4.05e-10!57;UBERON:0001893!5.71e-10!34;UBERON:0002616!9.47e-10!59;UBERON:0003408!2.05e-09!10;UBERON:0003056!2.10e-09!61;UBERON:0001042!2.24e-09!10;UBERON:0009145!2.24e-09!10;UBERON:0006562!1.43e-08!11;UBERON:0000955!4.34e-08!69;UBERON:0006238!4.34e-08!69;UBERON:0000033!4.81e-08!123;UBERON:0001950!6.64e-08!20;UBERON:0001869!1.67e-07!32;UBERON:0003351!2.41e-07!6;UBERON:0002619!3.14e-07!22;UBERON:0002020!4.58e-07!34;UBERON:0003528!4.58e-07!34 | |ontology_enrichment_uberon=UBERON:0000007!8.62e-21!2;UBERON:0002780!2.46e-14!41;UBERON:0001890!2.46e-14!41;UBERON:0006240!2.46e-14!41;UBERON:0003080!5.58e-14!42;UBERON:0002336!1.18e-11!1;UBERON:0001018!1.18e-11!1;UBERON:0002473!1.18e-11!1;UBERON:0005340!1.18e-11!1;UBERON:0002316!1.18e-11!1;UBERON:0003544!1.18e-11!1;UBERON:0001020!1.18e-11!1;UBERON:0005970!1.18e-11!1;UBERON:0002437!1.18e-11!1;UBERON:0001831!1.45e-11!1;UBERON:0001567!1.45e-11!1;UBERON:0008801!1.45e-11!1;UBERON:0001882!2.96e-11!1;UBERON:0005403!2.96e-11!1;UBERON:0003296!6.99e-11!4;UBERON:0010133!6.99e-11!4;UBERON:0000153!8.06e-11!129;UBERON:0007811!8.06e-11!129;UBERON:0007023!1.17e-10!115;UBERON:0002370!1.40e-10!4;UBERON:0005058!1.40e-10!4;UBERON:0009113!1.40e-10!4;UBERON:0003295!1.40e-10!4;UBERON:0005562!1.40e-10!4;UBERON:0002791!2.82e-10!33;UBERON:0001049!4.05e-10!57;UBERON:0005068!4.05e-10!57;UBERON:0006241!4.05e-10!57;UBERON:0007135!4.05e-10!57;UBERON:0001893!5.71e-10!34;UBERON:0002616!9.47e-10!59;UBERON:0003408!2.05e-09!10;UBERON:0003056!2.10e-09!61;UBERON:0001042!2.24e-09!10;UBERON:0009145!2.24e-09!10;UBERON:0006562!1.43e-08!11;UBERON:0000955!4.34e-08!69;UBERON:0006238!4.34e-08!69;UBERON:0000033!4.81e-08!123;UBERON:0001950!6.64e-08!20;UBERON:0001869!1.67e-07!32;UBERON:0003351!2.41e-07!6;UBERON:0002619!3.14e-07!22;UBERON:0002020!4.58e-07!34;UBERON:0003528!4.58e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;4.61e-26;1!UBERON:0011215;4.61e-26;1!UBERON:0001018;4.61e-26;1!UBERON:0002473;4.61e-26;1!UBERON:0005340;4.61e-26;1!UBERON:0003544;4.61e-26;1!UBERON:0005970;4.61e-26;1!UBERON:0002316;4.61e-26;1!UBERON:0001020;4.61e-26;1!UBERON:0002437;4.61e-26;1!UBERON:0001831;7.62e-26;1!UBERON:0001567;7.62e-26;1!UBERON:0001041;1.05e-16;14!UBERON:0005162;9.40e-14;2!UBERON:0000122;9.40e-14;2!UBERON:0001829;1.21e-13;2!UBERON:0004089;1.21e-13;2!UBERON:0004921;2.24e-10;33!UBERON:0001043;1.14e-09;3!UBERON:0002114;1.41e-09;2!UBERON:0001870;1.74e-09;3!UBERON:0001555;1.30e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0002336;4.61e-26;1!UBERON:0011215;4.61e-26;1!UBERON:0001018;4.61e-26;1!UBERON:0002473;4.61e-26;1!UBERON:0005340;4.61e-26;1!UBERON:0003544;4.61e-26;1!UBERON:0005970;4.61e-26;1!UBERON:0002316;4.61e-26;1!UBERON:0001020;4.61e-26;1!UBERON:0002437;4.61e-26;1!UBERON:0001831;7.62e-26;1!UBERON:0001567;7.62e-26;1!UBERON:0001041;1.05e-16;14!UBERON:0005162;9.40e-14;2!UBERON:0000122;9.40e-14;2!UBERON:0001829;1.21e-13;2!UBERON:0004089;1.21e-13;2!UBERON:0004921;2.24e-10;33!UBERON:0001043;1.14e-09;3!UBERON:0002114;1.41e-09;2!UBERON:0001870;1.74e-09;3!UBERON:0001555;1.30e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,4.61e-26,1;UBERON:0011215,4.61e-26,1;UBERON:0001018,4.61e-26,1;UBERON:0002473,4.61e-26,1;UBERON:0005340,4.61e-26,1;UBERON:0003544,4.61e-26,1;UBERON:0005970,4.61e-26,1;UBERON:0002316,4.61e-26,1;UBERON:0001020,4.61e-26,1;UBERON:0002437,4.61e-26,1;UBERON:0001831,7.62e-26,1;UBERON:0001567,7.62e-26,1;UBERON:0008801,7.62e-26,1;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0001829,1.21e-13,2;UBERON:0004089,1.21e-13,2;UBERON:0001043,1.10e-09,3;UBERON:0009143,1.10e-09,3;UBERON:0002114,1.41e-09,2;UBERON:0001870,1.81e-09,3;UBERON:0001893,4.98e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0511874793915,0,0,0,0,0,0,25.4080503702194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6051003529427,0,0,0,0,1.51945910294109,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,11.5134131040008,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6110.72456045861,0,0,0,0,0,21.6901004611314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.870866991587845,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0511874793915,0,0,0,0,0,0,25.4080503702194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6051003529427,0,0,0,0,1.51945910294109,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,11.5134131040008,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6110.72456045861,0,0,0,0,0,21.6901004611314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.870866991587845,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@LIPF | |short_description=p1@LIPF | ||
}} | }} |
Latest revision as of 19:44, 19 September 2015
Short description: | p1@LIPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIPF_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000394375_5end |
EntrezGene: | LIPF |
HGNC: | 6622 |
UniProt: | F5H1P4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 4.61e-26 | 1 |
central nervous system cell part cluster | 4.61e-26 | 1 |
axon tract | 4.61e-26 | 1 |
intercerebral commissure | 4.61e-26 | 1 |
dorsal telencephalic commissure | 4.61e-26 | 1 |
brain white matter | 4.61e-26 | 1 |
brain commissure | 4.61e-26 | 1 |
white matter | 4.61e-26 | 1 |
nervous system commissure | 4.61e-26 | 1 |
cerebral hemisphere white matter | 4.61e-26 | 1 |
parotid gland | 7.62e-26 | 1 |
cheek | 7.62e-26 | 1 |
parotid gland primordium | 7.62e-26 | 1 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
major salivary gland | 1.21e-13 | 2 |
midface | 1.21e-13 | 2 |
esophagus | 1.10e-09 | 3 |
esophageal region | 1.10e-09 | 3 |
duodenum | 1.41e-09 | 2 |
frontal cortex | 1.81e-09 | 3 |
telencephalon | 4.98e-07 | 34 |