FFCP PHASE1:Hg19::chr1:92952473..92952489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt=Q99684,B3KVN4 | |UniProt=Q99684,B3KVN4 | ||
|association_with_transcript=-40bp_to_ENST00000294702,NM_005263,uc001dow.3_5end | |association_with_transcript=-40bp_to_ENST00000294702,NM_005263,uc001dow.3_5end | ||
|cluster_id=chr1:92952473..92952489,- | |||
|coexpression_cluster_id=C973 | |coexpression_cluster_id=C973 | ||
|description=CAGE_peak_3_at_GFI1_5end | |description=CAGE_peak_3_at_GFI1_5end | ||
|id=chr1:92952473..92952489,- | |id=chr1:92952473..92952489,- | ||
|ontology_enrichment_celltype=CL:0000988!5.91e-25!182;CL:0000037!1.06e-24!172;CL:0000566!1.06e-24!172;CL:0002032!2.18e-21!165;CL:0000837!2.18e-21!165;CL:0000738!2.90e-13!140;CL:0000763!5.72e-12!112;CL:0000049!5.72e-12!112;CL:0002087!2.37e-10!119;CL:0002031!5.75e-10!124;CL:0000542!1.25e-09!53;CL:0000051!1.25e-09!53;CL:0000838!5.33e-09!52;CL:0000791!5.73e-08!18;CL:0000789!5.73e-08!18;CL:0002420!5.73e-08!18;CL:0002419!5.73e-08!18;CL:0000790!5.73e-08!18;CL:0000625!2.10e-07!11;CL:0000084!6.12e-07!25;CL:0000827!6.12e-07!25 | |ontology_enrichment_celltype=CL:0000988!5.91e-25!182;CL:0000037!1.06e-24!172;CL:0000566!1.06e-24!172;CL:0002032!2.18e-21!165;CL:0000837!2.18e-21!165;CL:0000738!2.90e-13!140;CL:0000763!5.72e-12!112;CL:0000049!5.72e-12!112;CL:0002087!2.37e-10!119;CL:0002031!5.75e-10!124;CL:0000542!1.25e-09!53;CL:0000051!1.25e-09!53;CL:0000838!5.33e-09!52;CL:0000791!5.73e-08!18;CL:0000789!5.73e-08!18;CL:0002420!5.73e-08!18;CL:0002419!5.73e-08!18;CL:0000790!5.73e-08!18;CL:0000625!2.10e-07!11;CL:0000084!6.12e-07!25;CL:0000827!6.12e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.88e-10;5!CL:0000784;4.98e-10;3!CL:0000623;4.78e-09;3!CL:0000123;2.94e-07;2!CL:0000242;2.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.24e-24,177;CL:0000037,3.61e-22,168;CL:0002032,1.51e-19,161;CL:0000837,1.51e-19,161;CL:0000763,2.95e-10,108;CL:0000049,2.95e-10,108;CL:0000097,3.58e-10,5;CL:0002028,3.58e-10,5;CL:0000784,5.00e-10,3;CL:0000542,7.64e-10,53;CL:0000051,7.64e-10,53;CL:0000738,1.34e-09,136;CL:0000623,3.54e-09,3;CL:0000825,3.54e-09,3;CL:0000838,8.70e-09,52;CL:0002031,8.87e-09,120;CL:0000134,6.63e-08,354;CL:0002320,1.53e-07,361;CL:0000219,2.08e-07,386;CL:0000242,2.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.54e-17!31;DOID:1240!2.86e-16!39;DOID:2531!8.96e-16!51;DOID:0060083!8.96e-16!51 | |ontology_enrichment_disease=DOID:8692!3.54e-17!31;DOID:1240!2.86e-16!39;DOID:2531!8.96e-16!51;DOID:0060083!8.96e-16!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.21e-22;31!DOID:1240;2.08e-19;39!DOID:2531;6.30e-13;51!DOID:0060083;6.30e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.33e-24,39;DOID:8692,1.04e-22,31;DOID:2531,2.04e-19,51;DOID:0060083,2.04e-19,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.84e-07!15;UBERON:0000179!3.84e-07!15;UBERON:0000463!3.84e-07!15;UBERON:0002390!3.96e-07!102;UBERON:0003061!3.96e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!3.84e-07!15;UBERON:0000179!3.84e-07!15;UBERON:0000463!3.84e-07!15;UBERON:0002390!3.96e-07!102;UBERON:0003061!3.96e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.73e-07,371 | |||
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| ||
|short_description=p3@GFI1 | |short_description=p3@GFI1 | ||
}} | }} |
Latest revision as of 20:35, 19 September 2015
Short description: | p3@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFI1_5end |
Coexpression cluster: | C973_acute_granulocyte_CD34_CD133_myelodysplastic_biphenotypic_liver |
Association with transcript: | -40bp_to_ENST00000294702, NM_005263, uc001dow.3_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684B3KVN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.24e-24 | 177 |
hematopoietic stem cell | 3.61e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.51e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-19 | 161 |
myeloid cell | 2.95e-10 | 108 |
common myeloid progenitor | 2.95e-10 | 108 |
mast cell | 3.58e-10 | 5 |
basophil mast progenitor cell | 3.58e-10 | 5 |
plasmacytoid dendritic cell | 5.00e-10 | 3 |
lymphocyte | 7.64e-10 | 53 |
common lymphoid progenitor | 7.64e-10 | 53 |
leukocyte | 1.34e-09 | 136 |
natural killer cell | 3.54e-09 | 3 |
pro-NK cell | 3.54e-09 | 3 |
lymphoid lineage restricted progenitor cell | 8.70e-09 | 52 |
hematopoietic lineage restricted progenitor cell | 8.87e-09 | 120 |
mesenchymal cell | 6.63e-08 | 354 |
connective tissue cell | 1.53e-07 | 361 |
motile cell | 2.08e-07 | 386 |
Merkel cell | 2.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.73e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.33e-24 | 39 |
myeloid leukemia | 1.04e-22 | 31 |
hematologic cancer | 2.04e-19 | 51 |
immune system cancer | 2.04e-19 | 51 |