FFCP PHASE1:Hg19::chr6:76311970..76311977,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26054 | |EntrezGene=26054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20944 | |HGNC=20944 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJH1 | |UniProt=D6RJH1 | ||
|association_with_transcript=30bp_to_ENST00000493959_5end | |association_with_transcript=30bp_to_ENST00000493959_5end | ||
|cluster_id=chr6:76311970..76311977,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_14_at_SENP6_5end | |description=CAGE_peak_14_at_SENP6_5end | ||
|id=chr6:76311970..76311977,+ | |id=chr6:76311970..76311977,+ | ||
|ontology_enrichment_celltype=CL:0000557!3.24e-26!71;CL:0002057!2.66e-25!42;CL:0000839!3.42e-25!70;CL:0000860!4.62e-24!45;CL:0000766!3.88e-23!76;CL:0002009!1.29e-22!65;CL:0002194!6.19e-21!63;CL:0000576!6.19e-21!63;CL:0000040!6.19e-21!63;CL:0000559!6.19e-21!63;CL:0000763!2.40e-16!112;CL:0000049!2.40e-16!112;CL:0002031!1.91e-15!124;CL:0000738!4.27e-15!140;CL:0002087!2.74e-12!119;CL:0000037!8.18e-12!172;CL:0000566!8.18e-12!172;CL:0002032!2.54e-11!165;CL:0000837!2.54e-11!165;CL:0000988!2.65e-11!182 | |ontology_enrichment_celltype=CL:0000557!3.24e-26!71;CL:0002057!2.66e-25!42;CL:0000839!3.42e-25!70;CL:0000860!4.62e-24!45;CL:0000766!3.88e-23!76;CL:0002009!1.29e-22!65;CL:0002194!6.19e-21!63;CL:0000576!6.19e-21!63;CL:0000040!6.19e-21!63;CL:0000559!6.19e-21!63;CL:0000763!2.40e-16!112;CL:0000049!2.40e-16!112;CL:0002031!1.91e-15!124;CL:0000738!4.27e-15!140;CL:0002087!2.74e-12!119;CL:0000037!8.18e-12!172;CL:0000566!8.18e-12!172;CL:0002032!2.54e-11!165;CL:0000837!2.54e-11!165;CL:0000988!2.65e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000840;3.34e-34;5!CL:0000990;6.15e-23;8!CL:0000860;4.97e-22;33!CL:0002057;4.97e-22;33!CL:0000451;7.86e-19;10!CL:0000473;1.64e-14;39!CL:0000234;1.64e-14;39!CL:0000576;8.28e-14;48!CL:0000766;2.55e-09;69!CL:0001014;1.23e-07;2!CL:0001016;1.23e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.80e-34,5;CL:0001029,3.80e-34,5;CL:0000557,2.50e-29,67;CL:0002009,2.26e-27,61;CL:0000839,2.96e-25,66;CL:0002194,1.06e-23,59;CL:0000576,1.06e-23,59;CL:0000040,1.06e-23,59;CL:0000559,1.06e-23,59;CL:0000766,4.57e-23,72;CL:0000990,6.69e-23,8;CL:0000451,8.43e-19,10;CL:0000860,5.95e-18,42;CL:0002057,5.95e-18,42;CL:0000763,1.00e-17,108;CL:0000049,1.00e-17,108;CL:0002031,8.23e-16,120;CL:0000473,1.29e-15,48;CL:0000234,1.29e-15,48;CL:0000738,8.92e-14,136;CL:0002087,1.29e-11,115;CL:0002032,2.15e-11,161;CL:0000837,2.15e-11,161;CL:0000037,7.47e-11,168;CL:0000988,3.22e-10,177;CL:0001014,1.36e-07,2;CL:0001016,1.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-22!80;UBERON:0002390!2.55e-22!102;UBERON:0003061!2.55e-22!102;UBERON:0002193!2.35e-21!112;UBERON:0001474!5.74e-20!86;UBERON:0002405!2.41e-18!115;UBERON:0004765!1.93e-17!101;UBERON:0001434!1.93e-17!101;UBERON:0003081!1.03e-08!216;UBERON:0007023!6.34e-08!115;UBERON:0002204!7.75e-08!167;UBERON:0002619!8.58e-08!22;UBERON:0001893!1.73e-07!34;UBERON:0002020!1.74e-07!34;UBERON:0003528!1.74e-07!34;UBERON:0000062!1.85e-07!511;UBERON:0001950!1.88e-07!20;UBERON:0001869!2.14e-07!32;UBERON:0002791!4.93e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.25e-13;1!UBERON:0006518;1.25e-13;1!UBERON:0008949;1.25e-13;1!UBERON:0000101;1.25e-13;1!UBERON:0002167;1.25e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.96e-26,76;UBERON:0001474,9.25e-24,82;UBERON:0004765,1.54e-21,90;UBERON:0002405,8.39e-21,93;UBERON:0002390,1.13e-19,98;UBERON:0003061,1.13e-19,98;UBERON:0001434,2.97e-19,100;UBERON:0002193,1.00e-17,108;UBERON:0002171,1.42e-13,1;UBERON:0006518,1.42e-13,1;UBERON:0008949,1.42e-13,1;UBERON:0000101,1.42e-13,1;UBERON:0002167,1.42e-13,1;UBERON:0002204,6.29e-11,167;UBERON:0003081,1.07e-08,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0.755751887377619,1.4555043671269,0.464858073811369,2.87817521615278,0,0.863077176966451,0.768482119587302,1.18241114944293,0.344745680736619,0.645484683583826,2.70852973188684,0.376484679085209,1.09162460023138,0.449446968890169,0.612167784741805,0.962787081228281,0,0.659702600373432,0.797854630486527,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.00499466102697,0.521482918420201,1.3031330682307,0,0.736555271975129,1.26584954976354,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,8.43823223502177,9.0547463395619,5.05240249971688,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0.0895585227028483,0,0,2.95597942737566,0.352193736052904,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0.30607276163049,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0,0.415440338029185,0.2249738915515,2.32140586367385,0.546746009922222,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0.655745261419609,0,0,0.488105059607853,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,0.41023272848151,0,0,0.322951291263702,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0.171488009437418,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0.452888530700021,0,0,0,0.490296643507811,0.235676547101626,0.196308467114945,0,0,0,0.187967835959707,0.322289439867886,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0.755751887377619,1.4555043671269,0.464858073811369,2.87817521615278,0,0.863077176966451,0.768482119587302,1.18241114944293,0.344745680736619,0.645484683583826,2.70852973188684,0.376484679085209,1.09162460023138,0.449446968890169,0.612167784741805,0.962787081228281,0,0.659702600373432,0.797854630486527,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.00499466102697,0.521482918420201,1.3031330682307,0,0.736555271975129,1.26584954976354,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,8.43823223502177,9.0547463395619,5.05240249971688,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0.0895585227028483,0,0,2.95597942737566,0.352193736052904,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0.30607276163049,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0,0.415440338029185,0.2249738915515,2.32140586367385,0.546746009922222,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0.655745261419609,0,0,0.488105059607853,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,0.41023272848151,0,0,0.322951291263702,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0.171488009437418,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0.452888530700021,0,0,0,0.490296643507811,0.235676547101626,0.196308467114945,0,0,0,0.187967835959707,0.322289439867886,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p14@SENP6 | |short_description=p14@SENP6 | ||
}} | }} |
Latest revision as of 21:11, 19 September 2015
Short description: | p14@SENP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SENP6_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 30bp_to_ENST00000493959_5end |
EntrezGene: | SENP6 |
HGNC: | 20944 |
UniProt: | D6RJH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.80e-34 | 5 |
common dendritic progenitor | 3.80e-34 | 5 |
granulocyte monocyte progenitor cell | 2.50e-29 | 67 |
macrophage dendritic cell progenitor | 2.26e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.96e-25 | 66 |
monopoietic cell | 1.06e-23 | 59 |
monocyte | 1.06e-23 | 59 |
monoblast | 1.06e-23 | 59 |
promonocyte | 1.06e-23 | 59 |
myeloid leukocyte | 4.57e-23 | 72 |
conventional dendritic cell | 6.69e-23 | 8 |
dendritic cell | 8.43e-19 | 10 |
classical monocyte | 5.95e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.95e-18 | 42 |
myeloid cell | 1.00e-17 | 108 |
common myeloid progenitor | 1.00e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 8.23e-16 | 120 |
defensive cell | 1.29e-15 | 48 |
phagocyte | 1.29e-15 | 48 |
leukocyte | 8.92e-14 | 136 |
nongranular leukocyte | 1.29e-11 | 115 |
hematopoietic oligopotent progenitor cell | 2.15e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-11 | 161 |
hematopoietic stem cell | 7.47e-11 | 168 |
hematopoietic cell | 3.22e-10 | 177 |
CD1a-positive Langerhans cell | 1.36e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.96e-26 | 76 |
bone element | 9.25e-24 | 82 |
skeletal element | 1.54e-21 | 90 |
immune system | 8.39e-21 | 93 |
hematopoietic system | 1.13e-19 | 98 |
blood island | 1.13e-19 | 98 |
skeletal system | 2.97e-19 | 100 |
hemolymphoid system | 1.00e-17 | 108 |
lower lobe of right lung | 1.42e-13 | 1 |
right lung lobe | 1.42e-13 | 1 |
lower lobe of lung | 1.42e-13 | 1 |
lobe of lung | 1.42e-13 | 1 |
right lung | 1.42e-13 | 1 |
musculoskeletal system | 6.29e-11 | 167 |
lateral plate mesoderm | 1.07e-08 | 203 |