FFCP PHASE1:Hg19::chr14:37051600..37051611,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16364 | |||
|TSSclassifier=strong | |||
|UniProt=O15522 | |||
|association_with_transcript=174bp_to_NM_014360,uc001wtx.2_5end | |||
|cluster_id=chr14:37051600..37051611,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_2_at_NKX2-8_5end | |||
|id=chr14:37051600..37051611,- | |||
|ontology_enrichment_celltype=CL:0000066!5.87e-17!254;CL:0002076!1.38e-16!43;CL:0002368!2.09e-13!13;CL:0000082!3.21e-12!19;CL:0000223!1.50e-10!59;CL:0002202!4.36e-09!9;CL:0002632!4.36e-09!9;CL:0000076!6.89e-07!62;CL:0000077!7.52e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.59e-14;13!CL:0002076;2.06e-10;42!CL:0000082;3.54e-09;19!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.29e-18,253;CL:0002076,4.56e-15,42;CL:0002368,1.01e-14,13;CL:0000223,7.49e-10,58;CL:0000082,3.50e-09,19;CL:0002202,8.83e-09,9;CL:0002632,8.83e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.69e-17;29!UBERON:0007123;4.22e-10;5 | |||
|ontology_enrichment_disease=DOID:305!2.95e-24!106;DOID:0050687!2.41e-21!143;DOID:162!1.50e-14!235;DOID:1749!4.86e-14!14;DOID:14566!8.90e-14!239;DOID:0050615!3.66e-09!16;DOID:1324!2.24e-08!15 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.19e-10;14!DOID:1324;5.87e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.79e-25,106;DOID:0050687,1.81e-17,143;DOID:162,4.07e-11,235;DOID:14566,1.09e-10,239;DOID:1749,3.93e-10,14;DOID:1324,8.47e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000065!8.01e-24!53;UBERON:0008947!1.10e-23!38;UBERON:0003258!1.10e-23!38;UBERON:0001004!2.00e-22!72;UBERON:0000072!3.44e-19!46;UBERON:0004119!3.06e-17!169;UBERON:0000925!3.06e-17!169;UBERON:0006595!3.06e-17!169;UBERON:0001007!2.84e-16!155;UBERON:0001555!2.84e-16!155;UBERON:0007026!2.84e-16!155;UBERON:0005178!4.01e-14!34;UBERON:0002224!4.01e-14!34;UBERON:0005181!1.63e-13!35;UBERON:0000077!2.34e-13!130;UBERON:0005153!3.08e-13!37;UBERON:0002048!7.30e-13!22;UBERON:0000117!7.30e-13!22;UBERON:0000171!7.30e-13!22;UBERON:0000170!7.30e-13!22;UBERON:0005597!7.30e-13!22;UBERON:0000118!7.30e-13!22;UBERON:0001041!1.35e-12!98;UBERON:0004802!3.21e-12!19;UBERON:0000115!3.21e-12!19;UBERON:0004921!3.99e-12!129;UBERON:0004185!3.99e-12!129;UBERON:0001737!7.93e-12!9;UBERON:0000063!1.93e-10!97;UBERON:0005157!2.08e-10!51;UBERON:0007023!3.24e-10!115;UBERON:0001049!4.55e-10!57;UBERON:0005068!4.55e-10!57;UBERON:0006241!4.55e-10!57;UBERON:0007135!4.55e-10!57;UBERON:0004807!5.64e-09!28;UBERON:0000064!1.11e-08!219;UBERON:0000062!1.16e-08!511;UBERON:0005911!4.85e-08!82;UBERON:0000915!6.84e-08!52;UBERON:0002298!7.17e-08!8;UBERON:0001557!1.16e-07!19;UBERON:0001017!2.08e-07!82;UBERON:0000955!2.39e-07!69;UBERON:0006238!2.39e-07!69;UBERON:0002046!3.32e-07!5;UBERON:0004117!3.32e-07!5;UBERON:0007689!3.32e-07!5;UBERON:0007123!3.32e-07!5;UBERON:0003091!3.32e-07!5;UBERON:0002616!5.04e-07!59;UBERON:0000464!6.36e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.07e-20;9!UBERON:0001557;2.07e-20;9!UBERON:0000065;5.52e-20;44!UBERON:0000072;7.81e-19;37!UBERON:0001004;1.38e-10;65!UBERON:0002046;4.22e-10;5!UBERON:0004802;3.54e-09;19!UBERON:0000115;3.54e-09;19!UBERON:0002048;9.66e-08;22!UBERON:0004807;9.66e-08;22!UBERON:0000117;9.66e-08;22!UBERON:0000171;9.66e-08;22!UBERON:0000170;9.66e-08;22!UBERON:0005178;1.23e-07;34!UBERON:0002224;1.23e-07;34!UBERON:0005181;1.35e-07;35!UBERON:0005162;1.73e-07;2!UBERON:0000122;1.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.85e-22,54;UBERON:0008947,1.30e-21,38;UBERON:0003258,1.30e-21,38;UBERON:0001737,2.12e-20,9;UBERON:0000072,1.44e-18,47;UBERON:0001004,1.46e-17,74;UBERON:0004119,2.26e-12,160;UBERON:0000925,2.26e-12,160;UBERON:0006595,2.26e-12,160;UBERON:0001557,3.51e-11,19;UBERON:0001007,3.56e-11,145;UBERON:0001555,3.56e-11,145;UBERON:0007026,3.56e-11,145;UBERON:0002046,3.87e-10,5;UBERON:0004117,3.87e-10,5;UBERON:0007689,3.87e-10,5;UBERON:0007123,3.87e-10,5;UBERON:0003091,3.87e-10,5;UBERON:0001041,4.96e-10,87;UBERON:0004802,3.50e-09,19;UBERON:0000115,3.50e-09,19;UBERON:0005178,1.03e-08,34;UBERON:0002224,1.03e-08,34;UBERON:0004921,1.06e-08,118;UBERON:0005181,2.13e-08,35;UBERON:0001048,5.10e-08,160;UBERON:0002048,9.55e-08,22;UBERON:0000117,9.55e-08,22;UBERON:0000171,9.55e-08,22;UBERON:0000170,9.55e-08,22;UBERON:0005597,9.55e-08,22;UBERON:0000118,9.55e-08,22;UBERON:0005162,1.56e-07,2;UBERON:0000122,1.56e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0.232387885739037,0,0,0,0,0,0,0,0,2.01121560067735,1.18009283054671,1.92808823906786,1.10293972732394,1.30727666455444,1.18635309555548,1.21348177344148,1.96221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07057393278297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,2.31398881505369,2.49847087574638,0.127612712494584,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,4.02181365321472,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,22.5904186696953,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.74214478529481,0,0,0,0,1.2517279311405,3.81380475439149,1.18193840883968,0,0,0,0,0,0,0,0,0.219385397153973,0.544692317594951,0.41827123283581,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,1.51472047819464,0,0,0,0,0,0,1.34802265961354,0,1.40558667435203,0,0,0,0,0,0,0,0.751617097072463,0.518440956986236,1.32930774541437,0.330991955875499,0.627865836814451,0,1.13843818411917,0,1.56203764501618,1.56787835863004,0.261177619741208,0.17472666824203,0,0,0,0,0.484945082442097,0.0882561266915003,0,0,0,0.126621591911757,1.56441106187842,0,0,0.599428828746391,0,0.687219576995494,0,0,4.10033367365927,1.17847017308398,0,0,0.713987523454252,0.288950589901519,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,3.48481110514041,0.179287339332845,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.92562821219883,1.02652102730598,0,0.106787412567695,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0.886068179966986,0.244052529803926,0,1.14681839138014,0.887432412294818,2.42175971471395,0,0.124980407962107,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,1.92997432237433,5.48088013126944,0.226705925512272,0.231522474323834,2.44736704506468,0,1.85280868296583,0.219284049578707,1.23682402162117,0.38582807654183,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.615349092722265,0,0.276629009856872,0,4.28308260777463,0,1.53360640352062,0.183428598521679,1.03973099535304,0,1.3807198521202,0,0,0,0,0,1.47394725759087,0,0.202612753855184,0,0,0.570742291745161,0,1.09651553371436,0,0,2.6830109804315,0,0,0,0.227662191351298,0,0,0,2.51488012014277,0.72350050919134,3.07303986298317,0,0.39246546425257,0,0.280272163313789,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0.860454717640555,0,0,0,1.14553434272025,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,2.10545517115895,0,0.475680363110274,0.11294608203896,0,1.05673990496671,0,0,2.82190377816914,0,0.942706188406504,1.57046773691956,0.297046400327086,0.4226557275834,0,0,0,0,2.49975514047921,0.705789743431384,0.882655033580851,0,0,0.573358332605805,0,0.475940431336403,0,0,0,0,0,0,0,1.14028650910293,0,0,0.275684698604535,0,3.63737751447549,5.09131847296739,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0.0645889098360061,0,2.24263725161227,1.40023748211963,1.21270313374932,0,0,0.404112318087525,0.78894425931944,0,0.244209805832924,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p2@NKX2-8 | |||
}} |
Latest revision as of 22:44, 19 September 2015
Short description: | p2@NKX2-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-8_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 174bp_to_NM_014360, uc001wtx.2_5end |
EntrezGene: | NKX2-8 |
HGNC: | 16364 |
UniProt: | O15522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.29e-18 | 253 |
endo-epithelial cell | 4.56e-15 | 42 |
respiratory epithelial cell | 1.01e-14 | 13 |
endodermal cell | 7.49e-10 | 58 |
epithelial cell of lung | 3.50e-09 | 19 |
epithelial cell of tracheobronchial tree | 8.83e-09 | 9 |
epithelial cell of lower respiratory tract | 8.83e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 7.85e-22 | 54 |
respiratory primordium | 1.30e-21 | 38 |
endoderm of foregut | 1.30e-21 | 38 |
larynx | 2.12e-20 | 9 |
segment of respiratory tract | 1.44e-18 | 47 |
respiratory system | 1.46e-17 | 74 |
endoderm-derived structure | 2.26e-12 | 160 |
endoderm | 2.26e-12 | 160 |
presumptive endoderm | 2.26e-12 | 160 |
upper respiratory tract | 3.51e-11 | 19 |
digestive system | 3.56e-11 | 145 |
digestive tract | 3.56e-11 | 145 |
primitive gut | 3.56e-11 | 145 |
thyroid gland | 3.87e-10 | 5 |
pharyngeal pouch | 3.87e-10 | 5 |
thyroid diverticulum | 3.87e-10 | 5 |
pharyngeal pouch 2 | 3.87e-10 | 5 |
thyroid primordium | 3.87e-10 | 5 |
foregut | 4.96e-10 | 87 |
respiratory tract epithelium | 3.50e-09 | 19 |
lung epithelium | 3.50e-09 | 19 |
thoracic cavity element | 1.03e-08 | 34 |
thoracic cavity | 1.03e-08 | 34 |
subdivision of digestive tract | 1.06e-08 | 118 |
thoracic segment organ | 2.13e-08 | 35 |
primordium | 5.10e-08 | 160 |
lung | 9.55e-08 | 22 |
respiratory tube | 9.55e-08 | 22 |
respiration organ | 9.55e-08 | 22 |
pair of lungs | 9.55e-08 | 22 |
lung primordium | 9.55e-08 | 22 |
lung bud | 9.55e-08 | 22 |
multi cell component structure | 1.56e-07 | 2 |
neuron projection bundle | 1.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.79e-25 | 106 |
cell type cancer | 1.81e-17 | 143 |
cancer | 4.07e-11 | 235 |
disease of cellular proliferation | 1.09e-10 | 239 |
squamous cell carcinoma | 3.93e-10 | 14 |
lung cancer | 8.47e-07 | 15 |