FFCP PHASE1:Hg19::chr12:66217414..66217419,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:66217414..66217419,+
|short_description=p25@HMGA2
|description=CAGE_peak_25_at_HMGA2_5end
|association_with_transcript=-17bp_to_uc001ssp.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8091 | |EntrezGene=8091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5009 | |HGNC=5009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_uc001ssp.1_5end | |||
|cluster_id=chr12:66217414..66217419,+ | |||
|description=CAGE_peak_25_at_HMGA2_5end | |||
|id=chr12:66217414..66217419,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.93e-10!254;CL:0002322!7.60e-09!5;CL:0002321!1.01e-08!248;CL:0000220!8.25e-08!246;CL:0000223!4.59e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.99e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.26e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.31e-21;11!UBERON:0009497;7.86e-18;13!UBERON:0003056;1.35e-09;3!UBERON:0001041;4.06e-08;30!UBERON:0003104;1.00e-07;31 | |||
|ontology_enrichment_disease=DOID:305!2.87e-07!106;DOID:0050687!6.18e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.00e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.55e-13,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.95e-12;19!UBERON:0006925;1.95e-12;19!UBERON:0002423;1.29e-09;25!UBERON:0002365;2.47e-07;31!UBERON:0002330;2.47e-07;31!UBERON:0002368;6.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.64e-12,19;UBERON:0006925,1.64e-12,19;UBERON:0008836,1.64e-12,19;UBERON:0008835,6.70e-11,22;UBERON:0003894,6.70e-11,22;UBERON:0009854,1.86e-10,23;UBERON:0007499,1.13e-09,25;UBERON:0009497,1.13e-09,25;UBERON:0000015,1.13e-09,25;UBERON:0002423,1.13e-09,25;UBERON:0006235,1.13e-09,25;UBERON:0004161,1.13e-09,25;UBERON:0009856,2.52e-09,26;UBERON:0002365,6.38e-08,31;UBERON:0002330,6.38e-08,31;UBERON:0002368,4.39e-07,35 | |||
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| ||
|short_description=p25@HMGA2 | |||
}} | }} |
Latest revision as of 23:12, 19 September 2015
Short description: | p25@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_HMGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_uc001ssp.1_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.26e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.64e-12 | 19 |
digestive gland | 1.64e-12 | 19 |
liver bud | 1.64e-12 | 19 |
hepatic diverticulum | 6.70e-11 | 22 |
liver primordium | 6.70e-11 | 22 |
digestive tract diverticulum | 1.86e-10 | 23 |
epithelial sac | 1.13e-09 | 25 |
epithelium of foregut-midgut junction | 1.13e-09 | 25 |
anatomical boundary | 1.13e-09 | 25 |
hepatobiliary system | 1.13e-09 | 25 |
foregut-midgut junction | 1.13e-09 | 25 |
septum transversum | 1.13e-09 | 25 |
sac | 2.52e-09 | 26 |
exocrine gland | 6.38e-08 | 31 |
exocrine system | 6.38e-08 | 31 |
endocrine gland | 4.39e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.55e-13 | 2 |