FFCP PHASE1:Hg19::chr3:98620486..98620493,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:98620486..98620493,- to FFCP PHASE1:Hg19::chr3:98620486..98620493,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131566 | |EntrezGene=131566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24627 | |HGNC=24627 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PD2,E7ET90 | |UniProt=Q96PD2,E7ET90 | ||
|association_with_transcript=39bp_to_ENST00000326840,ENST00000404023,NM_080927,uc003dtd.2,uc003dte.2,uc003dtf.1_5end | |||
|cluster_id=chr3:98620486..98620493,- | |||
|coexpression_cluster_id=C2764 | |||
|description=CAGE_peak_4_at_DCBLD2_5end | |||
|id=chr3:98620486..98620493,- | |||
|ontology_enrichment_celltype=CL:0000055!5.78e-35!180;CL:0000220!4.29e-33!246;CL:0002321!6.18e-33!248;CL:0000222!9.63e-22!119;CL:0000548!2.98e-20!679;CL:0000004!2.98e-20!679;CL:0000255!2.98e-20!679;CL:0000680!2.13e-19!57;CL:0000056!2.13e-19!57;CL:0000355!2.13e-19!57;CL:0000012!2.40e-19!682;CL:0000183!4.38e-18!59;CL:0000187!8.37e-18!54;CL:0000192!1.05e-16!42;CL:0000514!1.05e-16!42;CL:0000393!1.13e-16!60;CL:0000211!1.13e-16!60;CL:0000359!1.81e-16!32;CL:0000144!2.22e-15!625;CL:0002371!2.83e-13!591;CL:0000057!4.21e-13!75;CL:0000066!6.69e-12!254;CL:0000003!1.42e-10!722;CL:0000221!3.08e-08!71;CL:0000133!4.94e-07!59;CL:1000449!8.48e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.42e-19;32!CL:0000192;1.95e-13;43!CL:0000187;7.06e-11;55!CL:0000393;1.03e-08;61!CL:0000211;1.03e-08;61!CL:1000449;4.58e-08;15!CL:1000507;4.61e-08;10!CL:1000494;4.61e-08;10!CL:0002539;1.59e-07;10!CL:1000497;2.65e-07;17!CL:0002518;2.65e-07;17!CL:0002494;7.69e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.94e-22,250;CL:0000680,1.01e-20,58;CL:0000056,1.01e-20,58;CL:0000355,1.01e-20,58;CL:0000359,2.43e-20,32;CL:0000222,1.34e-19,121;CL:0000187,8.52e-19,55;CL:0000192,5.52e-18,43;CL:0000514,5.52e-18,43;CL:0000393,5.97e-16,61;CL:0000211,5.97e-16,61;CL:0000057,1.19e-10,76;CL:1000507,4.40e-08,10;CL:1000494,4.40e-08,10;CL:1000449,4.47e-08,15;CL:0002539,1.47e-07,10;CL:1000497,2.72e-07,17;CL:0002518,2.72e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;1.95e-13;43!CL:0000355;2.24e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!2.49e-08!14;DOID:120!7.18e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-09;14!DOID:120;5.30e-08;27!DOID:193;1.46e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-09,14;DOID:120,5.30e-08,27;DOID:193,1.53e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0005256!4.98e-22!143;UBERON:0000486!1.81e-20!82;UBERON:0004290!9.18e-19!70;UBERON:0000119!1.26e-18!312;UBERON:0003914!1.31e-18!118;UBERON:0000914!1.67e-18!83;UBERON:0002329!1.67e-18!83;UBERON:0003077!1.67e-18!83;UBERON:0003059!1.67e-18!83;UBERON:0007282!1.67e-18!83;UBERON:0009618!1.67e-18!83;UBERON:0007285!1.67e-18!83;UBERON:0000483!3.43e-18!309;UBERON:0000475!1.34e-17!365;UBERON:0001134!2.73e-17!61;UBERON:0002036!2.73e-17!61;UBERON:0003082!2.73e-17!61;UBERON:0002385!1.28e-16!63;UBERON:0001015!1.28e-16!63;UBERON:0000383!1.28e-16!63;UBERON:0000490!2.13e-16!138;UBERON:0001637!4.15e-16!42;UBERON:0003509!4.15e-16!42;UBERON:0004572!4.15e-16!42;UBERON:0002049!1.59e-15!79;UBERON:0007798!1.59e-15!79;UBERON:0002100!3.51e-15!216;UBERON:0004573!5.66e-13!33;UBERON:0004571!5.66e-13!33;UBERON:0001981!1.24e-12!60;UBERON:0007500!1.24e-12!60;UBERON:0004537!1.24e-12!60;UBERON:0006965!1.24e-12!60;UBERON:0000055!1.40e-12!69;UBERON:0004872!1.69e-12!84;UBERON:0003104!2.31e-12!238;UBERON:0009142!2.31e-12!238;UBERON:0000481!7.88e-12!347;UBERON:0000468!4.08e-11!659;UBERON:0004535!7.24e-11!110;UBERON:0000467!1.66e-10!625;UBERON:0000480!2.72e-10!626;UBERON:0001009!3.01e-10!113;UBERON:0000477!2.44e-08!286;UBERON:0004111!3.34e-08!241;UBERON:0002050!6.38e-08!605;UBERON:0005423!6.38e-08!605;UBERON:0000923!7.50e-08!604;UBERON:0005291!7.50e-08!604;UBERON:0006598!7.50e-08!604;UBERON:0002532!7.50e-08!604;UBERON:0000922!1.09e-07!612;UBERON:0001048!1.20e-07!168;UBERON:0003102!2.27e-07!95;UBERON:0007625!3.36e-07!11;UBERON:0002199!5.81e-07!45;UBERON:0002416!5.81e-07!45;UBERON:0004211!8.48e-07!16;UBERON:0001285!8.48e-07!16;UBERON:0007684!8.48e-07!16;UBERON:0003220!8.48e-07!16;UBERON:0004208!8.48e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.07e-13;33!UBERON:0004571;2.07e-13;33!UBERON:0001637;7.59e-13;42!UBERON:0003509;7.59e-13;42!UBERON:0004572;7.59e-13;42!UBERON:0010371;7.63e-09;31!UBERON:0007625;1.07e-08;11!UBERON:0003914;1.53e-08;74!UBERON:0007500;2.02e-08;56!UBERON:0001981;2.02e-08;56!UBERON:0004537;2.02e-08;56!UBERON:0002049;2.50e-08;75!UBERON:0007798;2.50e-08;75!UBERON:0006555;4.58e-08;15!UBERON:0004819;4.58e-08;15!UBERON:0001285;4.58e-08;15!UBERON:0007684;4.58e-08;15!UBERON:0004211;4.61e-08;10!UBERON:0009773;4.61e-08;10!UBERON:0001231;4.61e-08;10!UBERON:0004810;4.61e-08;10!UBERON:0002385;8.10e-08;31!UBERON:0001015;8.10e-08;31!UBERON:0000383;8.10e-08;31!UBERON:0004237;1.59e-07;10!UBERON:0004695;1.59e-07;10!UBERON:0002111;1.59e-07;10!UBERON:0004178;1.59e-07;10!UBERON:0000947;7.13e-07;21!UBERON:0010191;7.13e-07;21!UBERON:0000055;7.90e-07;65 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,1.0007329835313,0.893922188854576,0,2.53299878168311,1.89515962028049,0.783556884599516,2.45733936501509,2.09340350391728,0.218441372130172,0,0.618831764800233,1.65698687863958,7.39557661096953,5.42425075221579,3.65155045193687,3.90346239032406,4.80172126499473,8.16002764977012,4.38836610069323,2.57612388417951,9.03371205481036,0.753255837568817,0,0,0.0787107813136792,0,0,0,0,2.10844143144775,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.639312809217652,0.722878304769133,0,0,0,0.973269740605272,20.1359160559465,18.8469987843179,18.2696354241702,0.72038491523742,1.82147644146271,0.370784442784429,0,0,0,0,0,0,1.78886166630035,0,0.347140501607594,1.13061588384802,1.67799774483962,2.20094433552054,1.46296476575767,1.03366703667732,1.42306505074684,1.00416183829401,0.402829317109147,2.28081631715554,0,1.47065232138347,0.81014194788176,0.535798369704479,0.44905874525234,0.563057402416611,4.5994991239765,1.89853131913626,0.549605231791222,0,0,0,0.496971951695318,4.30543739659571,26.2170178010173,9.46560848471085,8.51204117276057,1.12135520028461,2.1349799145941,3.20667812942308,4.35695449559673,3.09834545760283,3.10577615915572,2.57307626996383,1.72852777344,0.70296429550139,4.37024107562449,1.71141546463335,4.18456305545043,2.58355897016283,1.29498355494505,1.54495887372473,1.83738754129404,1.22834317311768,1.34323515528495,0,0.494533858557114,2.73048408581408,1.43723628363248,0.336672227908132,0.750711119231785,6.09541054065202,0.877955241761676,0,0.901428353439581,5.89847352432109,3.58779271377724,1.92201649936711,1.48352330811693,8.70264178644767,3.50378599410692,0.772921620136887,1.8611685633159,7.25738228637445,1.16924406193438,2.01947019395292,0.644349290496095,0.161646056818812,8.52023022039874,5.03760491138201,1.3564847384839,6.57086900755209,5.18217629122586,8.60413786167011,0.487894824518382,0.397589304964456,0.464775771478074,0.10366105501537,0,0,1.56449532329816,0.643240938192885,4.14404764057442,2.3218396401599,2.88751792667834,0.591534000199219,0.337169380156203,0.482022059766964,0.55146986366197,0,0.71181185733329,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0,0,0,0,9.26466175612038,8.23127140564692,0,3.51851403440708,0.277765335475589,0.977424915930974,1.03993478527958,5.77325368101093,22.3745681601898,9.97973901004484,1.29929802984966,1.38895653772983,0.570762456703795,0.790204397959275,0,0,0,0,4.68669169933885,8.56708853814184,6.09632918142262,4.83616022595381,4.06887513919547,5.36735750831296,10.3459279958148,2.90559832243646,1.86595303986695,0.864719720501769,0.12624243342638,0.825472625798197,3.05590740446622,1.17217447210047,1.71072446022705,0.925447434329912,2.10240140490742,0,0.672786506072164,3.05172048183296,1.54010400223995,11.6344544182,3.57656445851882,1.690605505112,2.12750493267896,6.24044621468197,1.28603687131071,0,3.19706614819319,1.00084595560703,0,0,2.93162565864362,0.710783897485092,1.58390374586686,36.1727252471503,23.5314033822079,24.1934638660578,0,0,0,4.79249710983165,1.14861935834114,21.3955357561078,18.5320072534501,8.6300055471161,8.2368043090352,0,0,0,0,4.06551398755941,0,0,2.68026024534958,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,4.88277042659524,0.207970861530807,1.24900292158013,0.473107245101804,1.28855556491985,3.61135319673263,0,2.0694614258501,5.31380478828349,9.03408925854345,1.39013783148933,0.587403472388222,0.686286847621712,0,0,0,0,0,0.30239029332968,2.97729369382532,0.920771839728375,3.08726103876381,1.79394808957981,1.02341449813341,1.60853921143608,2.96836132889982,7.55627499633012,16.1581170034946,11.2514203738919,8.30807086693794,11.7372482244559,0.241718899183244,12.6319076291069,0.736647911487171,1.26295892981067,3.27764102412091,2.62248829918848,8.57279264524082,14.47888337563,10.1965469992991,11.6911379722609,15.1994345605741,4.54933536283586,0.510281115829547,5.39789790255348,1.54227252690289,7.31555381368403,5.51858751240339,8.6657932835313,7.47968408035852,11.6414872455533,0.219259876645935,0,6.66770325302612,7.21632220539353,4.22991913063594,0.103041011647722,0.457847324091717,0.495056999523528,1.14853107599234,0.650060246036521,9.64103579064957,2.70678011217942,4.31336127921004,3.68408819342711,2.75673144969061,0.751941714077915,1.0151168573996,4.51701125305335,1.4245125703478,4.13212288402445,3.0750410778417,3.95599408733211,1.0115778085555,7.43752878875657,40.6107927411526,36.9429753185118,7.08477234405004,9.04920251538937,22.6182577939519,15.5672344047293,19.0356099366848,1.116475108079,7.90948561796815,4.00323407240032,2.55897791311334,0.42793898803392,13.3645364128893,6.27958912159384,1.43897966066652,1.92175920815238,3.06312246098785,10.9178540049591,20.606341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| ||
|short_description=p4@DCBLD2 | |||
}} | }} |
Latest revision as of 23:13, 19 September 2015
Short description: | p4@DCBLD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DCBLD2_5end |
Coexpression cluster: | C2764_Smooth_Lens_Renal_Ciliary_Mesothelial_mucinous_glioblastoma |
Association with transcript: | 39bp_to_ENST00000326840, ENST00000404023, NM_080927, uc003dtd.2, uc003dte.2, uc003dtf.1_5end |
EntrezGene: | DCBLD2 |
HGNC: | 24627 |
UniProt: | Q96PD2E7ET90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.94e-22 | 250 |
muscle precursor cell | 1.01e-20 | 58 |
myoblast | 1.01e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-20 | 58 |
vascular associated smooth muscle cell | 2.43e-20 | 32 |
mesodermal cell | 1.34e-19 | 121 |
muscle cell | 8.52e-19 | 55 |
smooth muscle cell | 5.52e-18 | 43 |
smooth muscle myoblast | 5.52e-18 | 43 |
electrically responsive cell | 5.97e-16 | 61 |
electrically active cell | 5.97e-16 | 61 |
fibroblast | 1.19e-10 | 76 |
kidney tubule cell | 4.40e-08 | 10 |
nephron tubule epithelial cell | 4.40e-08 | 10 |
epithelial cell of nephron | 4.47e-08 | 15 |
aortic smooth muscle cell | 1.47e-07 | 10 |
kidney cell | 2.72e-07 | 17 |
kidney epithelial cell | 2.72e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-09 | 14 |
female reproductive organ cancer | 5.30e-08 | 27 |
reproductive organ cancer | 1.53e-07 | 29 |