FFCP PHASE1:Hg19::chr19:55658262..55658279,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11948 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=37bp_to_uc002qiz.3,uc002qja.3_5end | |||
|cluster_id=chr19:55658262..55658279,- | |||
|description=CAGE_peak_5_at_TNNT1_5end | |||
|id=chr19:55658262..55658279,- | |||
|ontology_enrichment_celltype=CL:0000066!3.15e-22!254;CL:0000039!1.74e-07!7;CL:0000586!1.74e-07!7;CL:0000076!4.06e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.70e-12;5!CL:0000039;1.92e-09;7!CL:0000586;1.92e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.44e-13,5;CL:0000066,1.93e-10,253;CL:0000039,1.22e-09,7;CL:0000586,1.22e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.60e-09;10!UBERON:0005564;7.60e-09;10 | |||
|ontology_enrichment_disease=DOID:162!3.16e-42!235;DOID:14566!2.45e-40!239;DOID:0050687!8.27e-36!143;DOID:305!6.30e-31!106;DOID:0050686!5.45e-20!137;DOID:299!1.28e-09!25;DOID:0050615!7.09e-07!16;DOID:1115!7.90e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:299;9.52e-10;25!DOID:1115;1.43e-08;20!DOID:170;8.46e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.56e-23,143;DOID:162,4.04e-22,235;DOID:14566,2.41e-21,239;DOID:305,1.04e-18,106;DOID:0050686,1.80e-11,137;DOID:299,8.54e-10,25;DOID:1115,2.01e-08,20;DOID:170,8.79e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;3.94e-08;3!UBERON:0001235;3.94e-08;3!UBERON:0006858;3.94e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.26e-08,3;UBERON:0001235,5.26e-08,3;UBERON:0006858,5.26e-08,3;UBERON:0003133,2.72e-07,48;UBERON:0005156,3.77e-07,59;UBERON:0000990,3.77e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0.739508020333575,0.309868802321207,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,1.0429658368404,0,0.605399502633369,0,0,0,0,0.419317291016752,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.80823028409406,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,3.90315859614705,2.12047629314376,2.90484857173796,1.96956004529204,1.7662459561294,2.55484151353081,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.804231779293047,0,0,0,0,0,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.806026704325635,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.106727557803444,2.42502057157008,0,3.32629322662648,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,1.20303882181971,0.920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0,0,1.3940745403212,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,1.08890984861323,0,1.72202149068492,0,0.443430153536676,0,0.507447609232169,0,0.569647187174163,0,0,0.648473311192717,0,0,3.73884248946156,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0.842391534340376,1.14117339516596,0,0,1.01575066680962,0,0,0.851692475380653,0.687010689511529,0.921722292925374,1.3420566473545,1.00109485027145,2.14926904942244,0.556812347790485,1.23087398947712,0,0.33307196799782,0,0,0,2.06312886974173,0.111443384277478,0,1.67121139316383,0.593929361665277,1.53580351049616,0,0,0.333926115068718,0.494411622680279,1.68900326502395,0,0,0,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.455173793141999,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0.435753854075961,0.83654246567162,0,0.113942055847001,2.53620294826866,0.897576444097721,0.217294743844016,0,0,0,0,0.627921025580099,0.166211681900156,0.451191321234361,0.980312671588698,1.51039428278258,0,0,0.210998064528027,0.652931232636591,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,1.45668227720456,0,0,0,0.063186579628488,0.300646838828985,0,0,0.661983911750998,0.627865836814451,2.38944859545918,3.13070500632772,3.05084280628905,1.90915712168644,1.37189356380129,2.08942095792966,0,2.92376255201748,0,0.292357268344742,0.246346371159628,0.0969890164884194,7.94305140223502,0,0.137041924646751,0.19871461170299,0,0.391102765469606,0.0801588202515337,0,0.599428828746391,1.15272333723285,1.4889757501569,0.171594997861965,0,0.124252535565433,1.17847017308398,2.31037150325144,2.824276850433,1.12198039399954,0,0,0,0,0,0,0,0.229160424011684,0,0.798716001995964,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,3.21506296930038,3.43848591493084,2.07720169014593,0,0,0,0,0,0,0.528001682597033,0,0.767660789277781,0,0,2.034148301238,0,0,0,0,0.082092520749339,0,1.13312091520126,0,0,0,0,0.171086837884329,4.22889013390003,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.235265819698172,1.87333962322753,1.01444720027578,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,1.20008329398946,0,0,0,1.34833881285112,2.14441591374926,0,0.226705925512272,0.231522474323834,3.67105056759701,0,0.617602894321944,1.09642024789354,1.06013487567529,1.54331230616732,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0.327609848846413,1.2288645437686,0.633936370075881,0,0,0.172214979660816,0.567515953566836,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,2.23457967189298,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,1.76665893301846,0,0.733714394086716,0.577628330751691,0,0,0.397832444232549,0,1.21023041222112,0,3.14288033377707,1.47394725759087,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0.590969204419841,1.55723962648897,0,0,0.560544326627578,0,1.29556554731173,0.95550337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| |||
|short_description=p5@TNNT1 | |||
}} |
Latest revision as of 23:55, 19 September 2015
Short description: | p5@TNNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_uc002qiz.3, uc002qja.3_5end |
EntrezGene: | TNNT1 |
HGNC: | 11948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.44e-13 | 5 |
epithelial cell | 1.93e-10 | 253 |
germ line cell | 1.22e-09 | 7 |
germ cell | 1.22e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 5.26e-08 | 3 |
adrenal cortex | 5.26e-08 | 3 |
adrenal/interrenal gland | 5.26e-08 | 3 |
reproductive organ | 2.72e-07 | 48 |
reproductive structure | 3.77e-07 | 59 |
reproductive system | 3.77e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.56e-23 | 143 |
cancer | 4.04e-22 | 235 |
disease of cellular proliferation | 2.41e-21 | 239 |
carcinoma | 1.04e-18 | 106 |
organ system cancer | 1.80e-11 | 137 |
adenocarcinoma | 8.54e-10 | 25 |
sarcoma | 2.01e-08 | 20 |
endocrine gland cancer | 8.79e-07 | 6 |