FFCP PHASE1:Hg19::chr19:55658281..55658357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7138 | |EntrezGene=7138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11948 | |HGNC=11948 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002qiz.3,uc002qja.3_5end | |association_with_transcript=0bp_to_uc002qiz.3,uc002qja.3_5end | ||
|cluster_id=chr19:55658281..55658357,- | |||
|description=CAGE_peak_2_at_TNNT1_5end | |description=CAGE_peak_2_at_TNNT1_5end | ||
|id=chr19:55658281..55658357,- | |id=chr19:55658281..55658357,- | ||
|ontology_enrichment_celltype=CL:0000066!2.16e-36!254;CL:0000548!7.32e-13!679;CL:0000004!7.32e-13!679;CL:0000255!7.32e-13!679;CL:0000012!2.12e-12!682;CL:0002076!9.69e-10!43;CL:0000063!1.70e-09!578;CL:0002321!1.45e-08!248;CL:0000223!1.81e-08!59;CL:0000082!2.83e-08!19;CL:0000220!4.48e-08!246;CL:0000076!7.85e-08!62 | |ontology_enrichment_celltype=CL:0000066!2.16e-36!254;CL:0000548!7.32e-13!679;CL:0000004!7.32e-13!679;CL:0000255!7.32e-13!679;CL:0000012!2.12e-12!682;CL:0002076!9.69e-10!43;CL:0000063!1.70e-09!578;CL:0002321!1.45e-08!248;CL:0000223!1.81e-08!59;CL:0000082!2.83e-08!19;CL:0000220!4.48e-08!246;CL:0000076!7.85e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.08e-09;42!CL:0000082;8.57e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.30e-38,253;CL:0002076,1.42e-11,42;CL:0000223,1.38e-09,58;CL:0000076,3.09e-09,63;CL:0000082,7.09e-08,19;CL:0002321,1.79e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.95e-43!235;DOID:14566!9.88e-42!239;DOID:0050687!8.14e-33!143;DOID:305!6.11e-28!106;DOID:0050686!8.05e-21!137;DOID:0050615!2.31e-07!16;DOID:1324!2.67e-07!15;DOID:1749!5.03e-07!14;DOID:1115!8.05e-07!20 | |ontology_enrichment_disease=DOID:162!1.95e-43!235;DOID:14566!9.88e-42!239;DOID:0050687!8.14e-33!143;DOID:305!6.11e-28!106;DOID:0050686!8.05e-21!137;DOID:0050615!2.31e-07!16;DOID:1324!2.67e-07!15;DOID:1749!5.03e-07!14;DOID:1115!8.05e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:0050687;2.86e-09;143!DOID:305;2.10e-08;106!DOID:1749;4.74e-08;14!DOID:1115;1.12e-07;20!DOID:299;1.87e-07;25!DOID:0050615;2.78e-07;16!DOID:8692;3.16e-07;31!DOID:1324;3.67e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.35e-51,235;DOID:14566,3.00e-48,239;DOID:0050687,4.75e-36,143;DOID:305,2.17e-29,106;DOID:0050686,4.57e-24,137;DOID:1749,3.37e-08,14;DOID:1115,1.27e-07,20;DOID:299,1.71e-07,25;DOID:8692,2.23e-07,31;DOID:0050615,2.53e-07,16;DOID:1324,3.25e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0004802!2.83e-08!19;UBERON:0000115!2.83e-08!19;UBERON:0005153!1.38e-07!37;UBERON:0005157!2.52e-07!51;UBERON:0002048!4.81e-07!22;UBERON:0000117!4.81e-07!22;UBERON:0000171!4.81e-07!22;UBERON:0000170!4.81e-07!22;UBERON:0005597!4.81e-07!22;UBERON:0000118!4.81e-07!22;UBERON:0008947!4.84e-07!38;UBERON:0003258!4.84e-07!38 | |ontology_enrichment_uberon=UBERON:0004802!2.83e-08!19;UBERON:0000115!2.83e-08!19;UBERON:0005153!1.38e-07!37;UBERON:0005157!2.52e-07!51;UBERON:0002048!4.81e-07!22;UBERON:0000117!4.81e-07!22;UBERON:0000171!4.81e-07!22;UBERON:0000170!4.81e-07!22;UBERON:0005597!4.81e-07!22;UBERON:0000118!4.81e-07!22;UBERON:0008947!4.84e-07!38;UBERON:0003258!4.84e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0004807;5.15e-09;22!UBERON:0005911;3.01e-08;36!UBERON:0004802;8.57e-08;19!UBERON:0000115;8.57e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,7.09e-08,19;UBERON:0000115,7.09e-08,19;UBERON:0005153,5.40e-07,37;UBERON:0005177,6.73e-07,101;UBERON:0008947,6.98e-07,38;UBERON:0003258,6.98e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,4.58726881473362,26.1129308446169,0.123766352960047,0.331397375727916,1.34465029290355,0,2.92124036154949,0.975865597581014,0.246242116153576,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,2.75354993794233,0.767658796194425,1.85779347979291,2.75826367343678,17.1687373703603,26.9920427421755,2.40148321798935,0.142169232487422,0.587200878669695,1.66198622559563,0.802177789880567,0.217010870715852,0.223915474239924,0.971680998056939,0,0.581592955118259,0.377875943688809,0,0.697287110717054,0.822335776043652,1.23882548358041,0.575384784644301,1.5369642391746,0,1.03423704220986,0,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0.870627715885752,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0.425208599930087,1.46761051855863,0.112328631146495,0.600707571366025,2.57160938715328,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,2.68280343881454,1.66221330396589,0,2.50668955317945,1.30361867064741,2.3858578411533,1.94653948121054,0.0945348171640679,0,0.263504357079378,0.589405839739707,29.5079183516959,4.07862887062872,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0,0,0,0,0,0,2.81980521976403,2.28081631715554,3.66093086322254,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,1.53316637465883,0,0.183201743930407,0,0,10.0301631992783,0,0.379891534993739,0,0.860509862246441,1.77334191099179,4.48542080113846,2.1349799145941,4.19334832309172,0,0,0,0,1.15235184896,1.40592859100278,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0,0.140450806702248,0,1.22834317311768,0.309977343527296,0,0,0,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,0,0,0,0.680593098960126,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.515281080091258,0.744467425326359,0.843881661206331,3.99491721160914,2.01947019395292,0,4.20279747728911,0,0,1.69560592310488,7.34391242020528,12.2735754265876,6.02289650316908,15.4906606784586,14.4457447470419,13.8270792014727,9.84780022646019,16.9054970086671,17.8838905947157,0,0.643240938192885,0,0,0,2.12952240071719,2.52877035117153,3.37415441836875,1.54411561825352,1.52515610864684,2.60997681022206,3.37078270400411,1.96221465125346,2.69323009862473,0,11.2193419042757,3.2925920906512,5.88034845542168,0,0,0,0,0.983907508344908,0.514703430895577,13.0602839636264,23.6043681841001,38.9047123233011,11.7587325351333,2.28065813717227,1.03993478527958,0,0.695582429850461,0.117408694235822,0.433099343283221,0.462985512576611,0,13.4334747653077,10.3018339451385,1.72351904261178,0.468008530278475,2.0808362720422,5.62403003920662,10.5828740765282,6.238104278665,14.5980392005643,5.23141089325132,15.7186898457737,0,0,0,0,0,1.58744735730423,6.11181480893244,9.37739577680376,6.84289784090821,1.33675740514321,3.00343057843917,0.571652865261156,0.672786506072164,0.87192013766656,0.36669142910475,0,7.15312891703765,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.710783897485092,0,2.71295439353627,0.871533458600294,16.2955975626753,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,1.07436577943937,1.34502172792233,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,1.60586089917446,1.26161932027148,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,2.5196248195744,1.56640925970192,1.02943027143257,0.206768026122887,1.07857100409308,0.320182673410333,36.9815637164437,3.32870879020994,45.9633245861114,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,2.77976734060731,18.0455823272956,25.4143529463074,0.114814448164607,0,0.131124414959424,5.86559496779635,2.15642943892361,3.92174884588428,4.38417673959782,2.21658420675039,1.13733384070897,0.170093705276516,0,0,0.541892875087706,1.50506932156456,0.509752546090077,4.98645605357235,1.34324852833307,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0,0,0.082509499920588,7.46545199395024,3.25030123018261,0,3.77015801339276,1.07834031980251,0.767518373630648,0.964856007391714,0.966782203814463,1.30515024522806,2.13066568540252,0.445160178233687,1.65284915360978,9.60950336825531,1.65896526242959,3.54052232994425,6.04299214086472,0.31481234683064,2.7881490806424,1.84820148105653,3.19383618190213,2.60979897622522,1.66791797193528,0.143124886741991,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0.318203247925937,4.70969184119538,0,0,0.235624804691373,2.22400729730648,3.17020642346017,5.89761838734574,1.95053495635836,0.974853958525138,3.16950440270266,0.136499911407986,0.141405431953713,0,0.5513653435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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,4.58726881473362,26.1129308446169,0.123766352960047,0.331397375727916,1.34465029290355,0,2.92124036154949,0.975865597581014,0.246242116153576,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,2.75354993794233,0.767658796194425,1.85779347979291,2.75826367343678,17.1687373703603,26.9920427421755,2.40148321798935,0.142169232487422,0.587200878669695,1.66198622559563,0.802177789880567,0.217010870715852,0.223915474239924,0.971680998056939,0,0.581592955118259,0.377875943688809,0,0.697287110717054,0.822335776043652,1.23882548358041,0.575384784644301,1.5369642391746,0,1.03423704220986,0,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0.870627715885752,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0.425208599930087,1.46761051855863,0.112328631146495,0.600707571366025,2.57160938715328,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,2.68280343881454,1.66221330396589,0,2.50668955317945,1.30361867064741,2.3858578411533,1.94653948121054,0.0945348171640679,0,0.263504357079378,0.589405839739707,29.5079183516959,4.07862887062872,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0,0,0,0,0,0,2.81980521976403,2.28081631715554,3.66093086322254,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,1.53316637465883,0,0.183201743930407,0,0,10.0301631992783,0,0.379891534993739,0,0.860509862246441,1.77334191099179,4.48542080113846,2.1349799145941,4.19334832309172,0,0,0,0,1.15235184896,1.40592859100278,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0,0.140450806702248,0,1.22834317311768,0.309977343527296,0,0,0,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,0,0,0,0.680593098960126,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.515281080091258,0.744467425326359,0.843881661206331,3.99491721160914,2.01947019395292,0,4.20279747728911,0,0,1.69560592310488,7.34391242020528,12.2735754265876,6.02289650316908,15.4906606784586,14.4457447470419,13.8270792014727,9.84780022646019,16.9054970086671,17.8838905947157,0,0.643240938192885,0,0,0,2.12952240071719,2.52877035117153,3.37415441836875,1.54411561825352,1.52515610864684,2.60997681022206,3.37078270400411,1.96221465125346,2.69323009862473,0,11.2193419042757,3.2925920906512,5.88034845542168,0,0,0,0,0.983907508344908,0.514703430895577,13.0602839636264,23.6043681841001,38.9047123233011,11.7587325351333,2.28065813717227,1.03993478527958,0,0.695582429850461,0.117408694235822,0.433099343283221,0.462985512576611,0,13.4334747653077,10.3018339451385,1.72351904261178,0.468008530278475,2.0808362720422,5.62403003920662,10.5828740765282,6.238104278665,14.5980392005643,5.23141089325132,15.7186898457737,0,0,0,0,0,1.58744735730423,6.11181480893244,9.37739577680376,6.84289784090821,1.33675740514321,3.00343057843917,0.571652865261156,0.672786506072164,0.87192013766656,0.36669142910475,0,7.15312891703765,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.710783897485092,0,2.71295439353627,0.871533458600294,16.2955975626753,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,1.07436577943937,1.34502172792233,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,1.60586089917446,1.26161932027148,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,2.5196248195744,1.56640925970192,1.02943027143257,0.206768026122887,1.07857100409308,0.320182673410333,36.9815637164437,3.32870879020994,45.9633245861114,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,2.77976734060731,18.0455823272956,25.4143529463074,0.114814448164607,0,0.131124414959424,5.86559496779635,2.15642943892361,3.92174884588428,4.38417673959782,2.21658420675039,1.13733384070897,0.170093705276516,0,0,0.541892875087706,1.50506932156456,0.509752546090077,4.98645605357235,1.34324852833307,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0,0,0.082509499920588,7.46545199395024,3.25030123018261,0,3.77015801339276,1.07834031980251,0.767518373630648,0.964856007391714,0.966782203814463,1.30515024522806,2.13066568540252,0.445160178233687,1.65284915360978,9.60950336825531,1.65896526242959,3.54052232994425,6.04299214086472,0.31481234683064,2.7881490806424,1.84820148105653,3.19383618190213,2.60979897622522,1.66791797193528,0.143124886741991,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0.318203247925937,4.70969184119538,0,0,0.235624804691373,2.22400729730648,3.17020642346017,5.89761838734574,1.95053495635836,0.974853958525138,3.16950440270266,0.136499911407986,0.141405431953713,0,0.5513653435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| ||
|short_description=p2@TNNT1 | |short_description=p2@TNNT1 | ||
}} | }} |
Latest revision as of 23:56, 19 September 2015
Short description: | p2@TNNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002qiz.3, uc002qja.3_5end |
EntrezGene: | TNNT1 |
HGNC: | 11948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.30e-38 | 253 |
endo-epithelial cell | 1.42e-11 | 42 |
endodermal cell | 1.38e-09 | 58 |
squamous epithelial cell | 3.09e-09 | 63 |
epithelial cell of lung | 7.09e-08 | 19 |
embryonic cell | 1.79e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 7.09e-08 | 19 |
lung epithelium | 7.09e-08 | 19 |
epithelial bud | 5.40e-07 | 37 |
trunk region element | 6.73e-07 | 101 |
respiratory primordium | 6.98e-07 | 38 |
endoderm of foregut | 6.98e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.35e-51 | 235 |
disease of cellular proliferation | 3.00e-48 | 239 |
cell type cancer | 4.75e-36 | 143 |
carcinoma | 2.17e-29 | 106 |
organ system cancer | 4.57e-24 | 137 |
squamous cell carcinoma | 3.37e-08 | 14 |
sarcoma | 1.27e-07 | 20 |
adenocarcinoma | 1.71e-07 | 25 |
myeloid leukemia | 2.23e-07 | 31 |
respiratory system cancer | 2.53e-07 | 16 |
lung cancer | 3.25e-07 | 15 |