FFCP PHASE1:Hg19::chr17:38324198..38324204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22794 | |EntrezGene=22794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17040 | |HGNC=17040 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-486bp_to_AK096126_5end | |association_with_transcript=-486bp_to_AK096126_5end | ||
|cluster_id=chr17:38324198..38324204,+ | |||
|coexpression_cluster_id=C558 | |||
|description=CAGE_peak_7_at_CASC3_5end | |description=CAGE_peak_7_at_CASC3_5end | ||
|id=chr17:38324198..38324204,+ | |id=chr17:38324198..38324204,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;1.14e-13;2!CL:0002598;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.21e-13,2;CL:0002598,1.37e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.57e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;6.72e-26;1!UBERON:0000178;1.72e-15;15!UBERON:0000179;1.72e-15;15!UBERON:0000463;1.72e-15;15!UBERON:0002456;1.14e-13;2!UBERON:0002390;4.69e-13;32!UBERON:0002193;2.37e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.93e-26,1;UBERON:0000178,1.59e-15,15;UBERON:0000179,1.59e-15,15;UBERON:0000463,1.59e-15,15;UBERON:0002456,1.21e-13,2 | |||
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| ||
|short_description=p7@CASC3 | |short_description=p7@CASC3 | ||
}} | }} |
Latest revision as of 00:15, 20 September 2015
Short description: | p7@CASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CASC3_5end |
Coexpression cluster: | C558_Mesenchymal_testis_Smooth_Endothelial_Placental_Tracheal_Hair |
Association with transcript: | -486bp_to_AK096126_5end |
EntrezGene: | CASC3 |
HGNC: | 17040 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.21e-13 | 2 |
bronchial smooth muscle cell | 1.37e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.93e-26 | 1 |
blood | 1.59e-15 | 15 |
haemolymphatic fluid | 1.59e-15 | 15 |
organism substance | 1.59e-15 | 15 |
internal thoracic artery | 1.21e-13 | 2 |