FFCP PHASE1:Hg19::chr11:71900677..71900694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2348 | |EntrezGene=2348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3791 | |HGNC=3791 | ||
|TSSclassifier=strong | |||
|UniProt=P15328 | |UniProt=P15328 | ||
|association_with_transcript=-17bp_to_ENST00000393681_5end | |association_with_transcript=-17bp_to_ENST00000393681_5end | ||
|cluster_id=chr11:71900677..71900694,+ | |||
|description=CAGE_peak_6_at_FOLR1_5end | |description=CAGE_peak_6_at_FOLR1_5end | ||
|id=chr11:71900677..71900694,+ | |id=chr11:71900677..71900694,+ | ||
|ontology_enrichment_celltype=CL:0002541!9.88e-07!3 | |ontology_enrichment_celltype=CL:0002541!9.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.39e-19;3!CL:0000039;7.67e-09;7!CL:0000586;7.67e-09;7!CL:0000313;6.16e-08;1!CL:0002563;2.11e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.54e-19,3;CL:0000039,7.67e-09,7;CL:0000586,7.67e-09,7;CL:0000313,5.58e-08,1;CL:0002563,2.32e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.39e-07;1!UBERON:0003104;3.03e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;6.16e-08;1!DOID:1799;8.28e-08;1!DOID:10165;8.28e-08;1!DOID:1798;8.28e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.58e-08,1;DOID:1799,8.28e-08,1;DOID:10165,8.28e-08,1;DOID:1798,8.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-12!115;UBERON:0000062!3.68e-08!511;UBERON:0002113!3.42e-07!27;UBERON:0003918!3.42e-07!27;UBERON:0005095!3.42e-07!27;UBERON:0007687!3.42e-07!27;UBERON:0005743!6.03e-07!86;UBERON:0000476!9.88e-07!3;UBERON:0000920!9.88e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.24e-12!115;UBERON:0000062!3.68e-08!511;UBERON:0002113!3.42e-07!27;UBERON:0003918!3.42e-07!27;UBERON:0005095!3.42e-07!27;UBERON:0007687!3.42e-07!27;UBERON:0005743!6.03e-07!86;UBERON:0000476!9.88e-07!3;UBERON:0000920!9.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.39e-19;3!UBERON:0000920;6.39e-19;3!UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0002113;5.53e-09;24!UBERON:0011143;5.53e-09;24!UBERON:0004911;6.16e-08;1!UBERON:0002171;1.26e-07;1!UBERON:0006518;1.26e-07;1!UBERON:0008949;1.26e-07;1!UBERON:0000101;1.26e-07;1!UBERON:0002167;1.26e-07;1!UBERON:0001242;2.11e-07;4!UBERON:0001262;2.11e-07;4!UBERON:0004786;2.11e-07;4!UBERON:0004808;2.11e-07;4!UBERON:0001277;2.11e-07;4!UBERON:0000489;2.44e-07;29!UBERON:0006554;4.48e-07;30!UBERON:0001008;4.48e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.54e-19,3;UBERON:0003124,3.34e-14,7;UBERON:0001896,1.59e-09,3;UBERON:0005290,1.59e-09,3;UBERON:0010096,1.59e-09,3;UBERON:0002113,3.02e-08,26;UBERON:0003918,3.02e-08,26;UBERON:0011143,3.02e-08,26;UBERON:0005095,3.02e-08,26;UBERON:0007687,3.02e-08,26;UBERON:0004911,5.58e-08,1;UBERON:0002171,1.69e-07,1;UBERON:0006518,1.69e-07,1;UBERON:0008949,1.69e-07,1;UBERON:0000101,1.69e-07,1;UBERON:0002167,1.69e-07,1;UBERON:0006554,2.18e-07,47;UBERON:0001242,2.32e-07,4;UBERON:0001262,2.32e-07,4;UBERON:0004786,2.32e-07,4;UBERON:0004808,2.32e-07,4;UBERON:0001277,2.32e-07,4;UBERON:0001008,3.28e-07,48;UBERON:0005631,3.60e-07,14;UBERON:0000158,3.60e-07,14;UBERON:0000489,7.95e-07,31 | |||
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| ||
|short_description=p6@FOLR1 | |short_description=p6@FOLR1 | ||
}} | }} |
Latest revision as of 00:43, 20 September 2015
Short description: | p6@FOLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FOLR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000393681_5end |
EntrezGene: | FOLR1 |
HGNC: | 3791 |
UniProt: | P15328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.54e-19 | 3 |
germ line cell | 7.67e-09 | 7 |
germ cell | 7.67e-09 | 7 |
serous secreting cell | 5.58e-08 | 1 |
intestinal epithelial cell | 2.32e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.54e-19 | 3 |
chorion | 3.34e-14 | 7 |
medulla oblongata | 1.59e-09 | 3 |
myelencephalon | 1.59e-09 | 3 |
future myelencephalon | 1.59e-09 | 3 |
kidney | 3.02e-08 | 26 |
kidney mesenchyme | 3.02e-08 | 26 |
upper urinary tract | 3.02e-08 | 26 |
kidney rudiment | 3.02e-08 | 26 |
kidney field | 3.02e-08 | 26 |
epithelium of female gonad | 5.58e-08 | 1 |
lower lobe of right lung | 1.69e-07 | 1 |
right lung lobe | 1.69e-07 | 1 |
lower lobe of lung | 1.69e-07 | 1 |
lobe of lung | 1.69e-07 | 1 |
right lung | 1.69e-07 | 1 |
urinary system structure | 2.18e-07 | 47 |
intestinal mucosa | 2.32e-07 | 4 |
wall of intestine | 2.32e-07 | 4 |
gastrointestinal system mucosa | 2.32e-07 | 4 |
gastrointestinal system epithelium | 2.32e-07 | 4 |
intestinal epithelium | 2.32e-07 | 4 |
renal system | 3.28e-07 | 48 |
extraembryonic membrane | 3.60e-07 | 14 |
membranous layer | 3.60e-07 | 14 |
cavitated compound organ | 7.95e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.58e-08 | 1 |
islet cell tumor | 8.28e-08 | 1 |
endocrine pancreas cancer | 8.28e-08 | 1 |
pancreatic endocrine carcinoma | 8.28e-08 | 1 |