FFCP PHASE1:Hg19::chr10:95242223..95242232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26509 | |EntrezGene=26509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3656 | |HGNC=3656 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8J4,C9JCN0,Q9NZM1 | |UniProt=F8W8J4,C9JCN0,Q9NZM1 | ||
|association_with_transcript=-149bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | |association_with_transcript=-149bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | ||
|cluster_id=chr10:95242223..95242232,- | |||
|coexpression_cluster_id=C1324 | |coexpression_cluster_id=C1324 | ||
|description=CAGE_peak_8_at_MYOF_5end | |description=CAGE_peak_8_at_MYOF_5end | ||
|id=chr10:95242223..95242232,- | |id=chr10:95242223..95242232,- | ||
|ontology_enrichment_celltype=CL:0000055!6.36e-17!180;CL:0000548!3.94e-13!679;CL:0000004!3.94e-13!679;CL:0000255!3.94e-13!679;CL:0000012!1.45e-12!682;CL:0002620!2.52e-11!23;CL:0000057!7.60e-11!75;CL:0000003!1.84e-08!722;CL:0002371!1.23e-07!591;CL:0000144!2.07e-07!625;CL:0000220!2.23e-07!246;CL:0002321!4.79e-07!248 | |ontology_enrichment_celltype=CL:0000055!6.36e-17!180;CL:0000548!3.94e-13!679;CL:0000004!3.94e-13!679;CL:0000255!3.94e-13!679;CL:0000012!1.45e-12!682;CL:0002620!2.52e-11!23;CL:0000057!7.60e-11!75;CL:0000003!1.84e-08!722;CL:0002371!1.23e-07!591;CL:0000144!2.07e-07!625;CL:0000220!2.23e-07!246;CL:0002321!4.79e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.35e-16;23!CL:0002334;2.04e-07;12!CL:0002580;4.78e-07;3!CL:0002579;5.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.31e-16,76;CL:0002620,5.15e-16,23;CL:0002334,1.67e-07,12;CL:0002579,4.36e-07,3;CL:0002580,5.73e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.57e-07;5!DOID:450;9.57e-07;5!DOID:66;9.57e-07;5!DOID:423;9.57e-07;5!DOID:0080000;9.57e-07;5!DOID:11722;9.57e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.77e-07,5;DOID:450,7.77e-07,5;DOID:66,7.77e-07,5;DOID:423,7.77e-07,5;DOID:0080000,7.77e-07,5;DOID:11722,7.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.44e-09!45;UBERON:0002416!4.44e-09!45;UBERON:0002097!4.51e-09!40;UBERON:0003102!1.77e-08!95;UBERON:0002100!1.95e-07!216;UBERON:0002049!2.73e-07!79;UBERON:0007798!2.73e-07!79;UBERON:0001637!2.84e-07!42;UBERON:0003509!2.84e-07!42;UBERON:0004572!2.84e-07!42;UBERON:0000475!3.13e-07!365;UBERON:0001981!7.63e-07!60;UBERON:0007500!7.63e-07!60;UBERON:0004537!7.63e-07!60;UBERON:0006965!7.63e-07!60 | |ontology_enrichment_uberon=UBERON:0002199!4.44e-09!45;UBERON:0002416!4.44e-09!45;UBERON:0002097!4.51e-09!40;UBERON:0003102!1.77e-08!95;UBERON:0002100!1.95e-07!216;UBERON:0002049!2.73e-07!79;UBERON:0007798!2.73e-07!79;UBERON:0001637!2.84e-07!42;UBERON:0003509!2.84e-07!42;UBERON:0004572!2.84e-07!42;UBERON:0000475!3.13e-07!365;UBERON:0001981!7.63e-07!60;UBERON:0007500!7.63e-07!60;UBERON:0004537!7.63e-07!60;UBERON:0006965!7.63e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.77e-11;41!UBERON:0003688;9.10e-09;6!UBERON:0002358;9.10e-09;6!UBERON:0003684;9.10e-09;6!UBERON:0001178;9.10e-09;6!UBERON:0002199;2.83e-08;46!UBERON:0002416;2.83e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.71e-14,41;UBERON:0002199,1.27e-11,46;UBERON:0002416,1.27e-11,46;UBERON:0003688,7.80e-09,6;UBERON:0002358,7.80e-09,6;UBERON:0003684,7.80e-09,6;UBERON:0001178,7.80e-09,6;UBERON:0003102,1.97e-07,99 | |||
|phase1_expression=1.99846217197612,1.07050261945492,3.80576891059122,4.00293193412522,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.975865597581014,0.369363174230364,0.816002764977012,0.626909442956176,0.286235987131057,1.09499540058307,1.12988375635323,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,2.58923153089935,2.81776777182011,0.709446689665756,0.689491361473237,0.645484683583826,2.70852973188684,0.564727018627814,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.659702600373432,0.997318288108159,0,0.870627715885752,0,0,2.26123798731069,1.5644487552606,1.08594422352558,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.640456598628376,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,5.0133791063589,1.73815822752988,1.5905718941022,0.973269740605272,0.567208902984407,0.886917589850256,0.87834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,1.25849830862972,0,0.835979866147242,0.775250277507987,1.42306505074684,0.66944122552934,0.805658634218294,0,0.732186172644509,0.735326160691737,0,0.446498641420399,0.673588117878509,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,3.47880366186723,0.886413581652058,3.44263870114369,2.29469296599051,1.77334191099179,0,0,0.49333509683432,0,0.404132016209064,0.490385709340376,0.302714855289863,0,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.809364721840658,0.561803226808994,0.204154171254893,0,0,0,1.7308685049499,0.910161361938026,0,0,0.375355559615893,0,2.63386572528503,4.29082914118628,1.80285670687916,0.340296549480063,9.86642996288741,0.85422955527427,1.48352330811693,7.20218630602566,2.88547081867629,7.72921620136887,2.41951913231067,4.55696097051419,2.72823614451356,11.6119536152293,3.31379635112278,0.484938170456436,16.3304412557643,3.72782763442269,1.18692414617341,1.54608682530637,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,4.69348596989448,1.28648187638577,0,0.464367928031979,1.44375896333917,0.236613600079688,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0.768251997860379,1.1240175325762,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0.231860809950154,0.587043471179108,0,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0,0.336393253036082,0,0.1466765716419,0.517086863031111,3.57656445851882,0,1.86156681609409,4.16029747645464,0.257207374262142,1.41849132023278,0.266422179016099,0,0.542621605391443,0,0.977208552881205,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0.718874566474748,2.29723871668228,0,1.30303176000821,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,1.24782516918484,3.39015078714607,1.57702415033935,1.52283839490527,0.300946099727719,0,0,1.32845119707087,1.10621501125022,0.955719759148911,0,0,0,0,0,0,0,0.30239029332968,3.2254015016441,13.6581156226376,2.24528075546459,2.94720043288112,4.60536524160033,4.50390979202101,0,0.771048469013278,0.177561725313127,1.64254312027618,0,0.581051892299796,0,0.601519410909855,0.460404944679482,0.459257792658427,0.546273504020151,0.262248829918848,0.451199612907412,1.38627606787947,0.784349769176855,0,1.26661954671451,0,0.510281115829547,1.0795795805107,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.214840489736547,0.145016693914229,0.426133137080504,0.0890320356467374,0,0,0.382838137483752,0,0,5.66662224295152,2.0911118104818,1.54016790088044,0,0,0.55597265731176,0.429374660225974,0,1.2655176988749,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.899362287916574,0.274537029736055,0,0.606547444719948,1.58510321173008,0.421258456238981,0,0.487426979262569,1.05650146756755,0.818999468447914,0,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0,1.01455188481352,0.30982349809975,0.845086807596724,0.860468113224309,0.196498082026242,0,0.709522128141196,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0.333926115068718,0.494411622680279,0,0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| |phase1_expression=1.99846217197612,1.07050261945492,3.80576891059122,4.00293193412522,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.975865597581014,0.369363174230364,0.816002764977012,0.626909442956176,0.286235987131057,1.09499540058307,1.12988375635323,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,2.58923153089935,2.81776777182011,0.709446689665756,0.689491361473237,0.645484683583826,2.70852973188684,0.564727018627814,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.659702600373432,0.997318288108159,0,0.870627715885752,0,0,2.26123798731069,1.5644487552606,1.08594422352558,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.640456598628376,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,5.0133791063589,1.73815822752988,1.5905718941022,0.973269740605272,0.567208902984407,0.886917589850256,0.87834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,1.25849830862972,0,0.835979866147242,0.775250277507987,1.42306505074684,0.66944122552934,0.805658634218294,0,0.732186172644509,0.735326160691737,0,0.446498641420399,0.673588117878509,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,3.47880366186723,0.886413581652058,3.44263870114369,2.29469296599051,1.77334191099179,0,0,0.49333509683432,0,0.404132016209064,0.490385709340376,0.302714855289863,0,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.809364721840658,0.561803226808994,0.204154171254893,0,0,0,1.7308685049499,0.910161361938026,0,0,0.375355559615893,0,2.63386572528503,4.29082914118628,1.80285670687916,0.340296549480063,9.86642996288741,0.85422955527427,1.48352330811693,7.20218630602566,2.88547081867629,7.72921620136887,2.41951913231067,4.55696097051419,2.72823614451356,11.6119536152293,3.31379635112278,0.484938170456436,16.3304412557643,3.72782763442269,1.18692414617341,1.54608682530637,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,4.69348596989448,1.28648187638577,0,0.464367928031979,1.44375896333917,0.236613600079688,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0.768251997860379,1.1240175325762,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0.231860809950154,0.587043471179108,0,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0,0.336393253036082,0,0.1466765716419,0.517086863031111,3.57656445851882,0,1.86156681609409,4.16029747645464,0.257207374262142,1.41849132023278,0.266422179016099,0,0.542621605391443,0,0.977208552881205,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0.718874566474748,2.29723871668228,0,1.30303176000821,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,1.24782516918484,3.39015078714607,1.57702415033935,1.52283839490527,0.300946099727719,0,0,1.32845119707087,1.10621501125022,0.955719759148911,0,0,0,0,0,0,0,0.30239029332968,3.2254015016441,13.6581156226376,2.24528075546459,2.94720043288112,4.60536524160033,4.50390979202101,0,0.771048469013278,0.177561725313127,1.64254312027618,0,0.581051892299796,0,0.601519410909855,0.460404944679482,0.459257792658427,0.546273504020151,0.262248829918848,0.451199612907412,1.38627606787947,0.784349769176855,0,1.26661954671451,0,0.510281115829547,1.0795795805107,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.214840489736547,0.145016693914229,0.426133137080504,0.0890320356467374,0,0,0.382838137483752,0,0,5.66662224295152,2.0911118104818,1.54016790088044,0,0,0.55597265731176,0.429374660225974,0,1.2655176988749,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.899362287916574,0.274537029736055,0,0.606547444719948,1.58510321173008,0.421258456238981,0,0.487426979262569,1.05650146756755,0.818999468447914,0,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0,1.01455188481352,0.30982349809975,0.845086807596724,0.860468113224309,0.196498082026242,0,0.709522128141196,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0.333926115068718,0.494411622680279,0,0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| ||
|short_description=p8@MYOF | |short_description=p8@MYOF | ||
}} | }} |
Latest revision as of 01:29, 20 September 2015
Short description: | p8@MYOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MYOF_5end |
Coexpression cluster: | C1324_Fibroblast_Preadipocyte_basal_migratory_mesenchymal_Smooth_spindle |
Association with transcript: | -149bp_to_ENST00000371489, ENST00000371501, ENST00000371502, NM_013451, NM_133337, uc001kin.2, uc001kio.2, uc001kip.3, uc009xuf.2_5end |
EntrezGene: | MYOF |
HGNC: | 3656 |
UniProt: | F8W8J4C9JCN0Q9NZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.31e-16 | 76 |
skin fibroblast | 5.15e-16 | 23 |
preadipocyte | 1.67e-07 | 12 |
omentum preadipocyte | 4.36e-07 | 3 |
preadipocyte of the breast | 5.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.71e-14 | 41 |
integument | 1.27e-11 | 46 |
integumental system | 1.27e-11 | 46 |
omentum | 7.80e-09 | 6 |
peritoneum | 7.80e-09 | 6 |
abdominal cavity | 7.80e-09 | 6 |
visceral peritoneum | 7.80e-09 | 6 |
surface structure | 1.97e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.77e-07 | 5 |
myotonic disease | 7.77e-07 | 5 |
muscle tissue disease | 7.77e-07 | 5 |
myopathy | 7.77e-07 | 5 |
muscular disease | 7.77e-07 | 5 |
myotonic dystrophy | 7.77e-07 | 5 |