FFCP PHASE1:Hg19::chr6:117198376..117198383,+: Difference between revisions
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|id=chr6:117198376..117198383,+
|short_description=p2@RFX6
|description=CAGE_peak_2_at_RFX6_5end
|association_with_transcript=0bp_to_NM_173560,uc003pxm.2_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222546 | |EntrezGene=222546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21478 | |HGNC=21478 | ||
|TSSclassifier=strong | |||
|UniProt=Q8HWS3 | |UniProt=Q8HWS3 | ||
|association_with_transcript=0bp_to_NM_173560,uc003pxm.2_5end | |||
|cluster_id=chr6:117198376..117198383,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_2_at_RFX6_5end | |||
|id=chr6:117198376..117198383,+ | |||
|ontology_enrichment_celltype=CL:0002535!2.15e-07!2;CL:1000415!4.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.61e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.61e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.45e-24!2;UBERON:0006122!2.62e-13!1;UBERON:0003296!8.67e-13!4;UBERON:0010133!8.67e-13!4;UBERON:0000160!2.25e-10!27;UBERON:0005409!4.78e-08!35;UBERON:0001894!1.09e-07!7;UBERON:0006222!1.09e-07!7;UBERON:0002108!1.50e-07!14;UBERON:0006955!2.15e-07!2;UBERON:0004801!2.15e-07!2;UBERON:0002950!2.74e-07!2;UBERON:0001891!2.74e-07!2;UBERON:0009616!2.74e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.61e-34;2!UBERON:0004801;3.61e-34;2!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0001871;9.43e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0001871,9.89e-11,6 | |||
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|short_description=p2@RFX6 | |||
}} | }} |
Latest revision as of 01:34, 20 September 2015
Short description: | p2@RFX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFX6_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 0bp_to_NM_173560, uc003pxm.2_5end |
EntrezGene: | RFX6 |
HGNC: | 21478 |
UniProt: | Q8HWS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.61e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
temporal lobe | 9.89e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |