FFCP PHASE1:Hg19::chr20:10199531..10199552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6616 | |EntrezGene=6616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11132 | |HGNC=11132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000304886_5end | |association_with_transcript=50bp_to_ENST00000304886_5end | ||
|cluster_id=chr20:10199531..10199552,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_SNAP25_5end | |description=CAGE_peak_3_at_SNAP25_5end | ||
|id=chr20:10199531..10199552,+ | |id=chr20:10199531..10199552,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.50e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000073;6.74e-26;53!UBERON:0002616;6.74e-26;53!UBERON:0002780;1.59e-25;41!UBERON:0001890;1.59e-25;41!UBERON:0001893;1.23e-24;34!UBERON:0003528;2.26e-24;34!UBERON:0002020;2.26e-24;34!UBERON:0001869;2.61e-24;32!UBERON:0002791;6.15e-24;32!UBERON:0002619;1.05e-22;22!UBERON:0001950;1.00e-20;20!UBERON:0000956;2.26e-20;25!UBERON:0000203;2.26e-20;25!UBERON:0000955;2.59e-20;68!UBERON:0001017;1.08e-19;75!UBERON:0001016;1.60e-17;83!UBERON:0004732;1.88e-12;13!UBERON:0004733;9.38e-12;12!UBERON:0002028;9.38e-12;12!UBERON:0002420;8.02e-10;9!UBERON:0007245;8.02e-10;9!UBERON:0010009;8.02e-10;9!UBERON:0010011;8.02e-10;9!UBERON:0000454;8.02e-10;9!UBERON:0000125;1.07e-09;9!UBERON:0002308;1.07e-09;9!UBERON:0002680;4.69e-09;9!UBERON:0001895;4.69e-09;9!UBERON:0011216;5.94e-09;132!UBERON:0007023;8.15e-09;114!UBERON:0000200;4.56e-08;6!UBERON:0001894;5.44e-08;7!UBERON:0009663;8.01e-08;7!UBERON:0002298;2.78e-07;6!UBERON:0001872;8.63e-07;5!UBERON:0002021;9.43e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.39e-40!82;UBERON:0005743!1.01e-37!86;UBERON:0000073!8.08e-37!94;UBERON:0001016!8.08e-37!94;UBERON:0001049!1.69e-36!57;UBERON:0005068!1.69e-36!57;UBERON:0006241!1.69e-36!57;UBERON:0007135!1.69e-36!57;UBERON:0000955!2.08e-34!69;UBERON:0006238!2.08e-34!69;UBERON:0002616!1.31e-33!59;UBERON:0002346!3.64e-32!90;UBERON:0003075!4.87e-32!86;UBERON:0007284!4.87e-32!86;UBERON:0002780!9.71e-28!41;UBERON:0001890!9.71e-28!41;UBERON:0006240!9.71e-28!41;UBERON:0003080!1.52e-26!42;UBERON:0007023!4.48e-26!115;UBERON:0000924!7.40e-24!173;UBERON:0006601!7.40e-24!173;UBERON:0004121!2.22e-23!169;UBERON:0000033!3.06e-23!123;UBERON:0001893!7.00e-23!34;UBERON:0002020!7.31e-23!34;UBERON:0003528!7.31e-23!34;UBERON:0003056!2.50e-22!61;UBERON:0002791!4.64e-22!33;UBERON:0000153!5.67e-22!129;UBERON:0007811!5.67e-22!129;UBERON:0001869!8.50e-22!32;UBERON:0000956!8.49e-17!25;UBERON:0000203!8.49e-17!25;UBERON:0002619!8.51e-17!22;UBERON:0001950!2.39e-15!20;UBERON:0000481!2.90e-13!347;UBERON:0000475!4.05e-13!365;UBERON:0000064!3.10e-12!219;UBERON:0000062!3.87e-12!511;UBERON:0000477!9.43e-12!286;UBERON:0003076!6.23e-11!15;UBERON:0003057!6.23e-11!15;UBERON:0000119!1.08e-09!312;UBERON:0000922!1.08e-09!612;UBERON:0004732!1.32e-09!13;UBERON:0000468!1.87e-09!659;UBERON:0000483!2.17e-09!309;UBERON:0004111!3.38e-09!241;UBERON:0004733!4.31e-09!12;UBERON:0002028!4.31e-09!12;UBERON:0007277!4.31e-09!12;UBERON:0000467!5.00e-09!625;UBERON:0000480!6.97e-09!626;UBERON:0002050!7.05e-09!605;UBERON:0005423!7.05e-09!605;UBERON:0000923!1.22e-08!604;UBERON:0005291!1.22e-08!604;UBERON:0006598!1.22e-08!604;UBERON:0002532!1.22e-08!604;UBERON:0000025!1.22e-08!194;UBERON:0002420!1.28e-07!9;UBERON:0007245!1.28e-07!9;UBERON:0010009!1.28e-07!9;UBERON:0010011!1.28e-07!9;UBERON:0000454!1.28e-07!9;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0002680!4.15e-07!9;UBERON:0001895!4.15e-07!9;UBERON:0010092!4.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.74e-26;53!UBERON:0002616;6.74e-26;53!UBERON:0002780;1.59e-25;41!UBERON:0001890;1.59e-25;41!UBERON:0001893;1.23e-24;34!UBERON:0003528;2.26e-24;34!UBERON:0002020;2.26e-24;34!UBERON:0001869;2.61e-24;32!UBERON:0002791;6.15e-24;32!UBERON:0002619;1.05e-22;22!UBERON:0001950;1.00e-20;20!UBERON:0000956;2.26e-20;25!UBERON:0000203;2.26e-20;25!UBERON:0000955;2.59e-20;68!UBERON:0001017;1.08e-19;75!UBERON:0001016;1.60e-17;83!UBERON:0004732;1.88e-12;13!UBERON:0004733;9.38e-12;12!UBERON:0002028;9.38e-12;12!UBERON:0002420;8.02e-10;9!UBERON:0007245;8.02e-10;9!UBERON:0010009;8.02e-10;9!UBERON:0010011;8.02e-10;9!UBERON:0000454;8.02e-10;9!UBERON:0000125;1.07e-09;9!UBERON:0002308;1.07e-09;9!UBERON:0002680;4.69e-09;9!UBERON:0001895;4.69e-09;9!UBERON:0011216;5.94e-09;132!UBERON:0007023;8.15e-09;114!UBERON:0000200;4.56e-08;6!UBERON:0001894;5.44e-08;7!UBERON:0009663;8.01e-08;7!UBERON:0002298;2.78e-07;6!UBERON:0001872;8.63e-07;5!UBERON:0002021;9.43e-07;5 | |||
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| ||
|short_description=p3@SNAP25 | |short_description=p3@SNAP25 | ||
}} | }} |
Latest revision as of 02:20, 20 September 2015
Short description: | p3@SNAP25 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNAP25_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 50bp_to_ENST00000304886_5end |
EntrezGene: | SNAP25 |
HGNC: | 11132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data