FFCP PHASE1:Hg19::chr2:216245737..216245751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=300bp_to_ENST00000474036_5end | |association_with_transcript=300bp_to_ENST00000474036_5end | ||
|cluster_id=chr2:216245737..216245751,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_65_at_FN1_5end | |description=CAGE_peak_65_at_FN1_5end | ||
|id=chr2:216245737..216245751,- | |id=chr2:216245737..216245751,- | ||
|ontology_enrichment_celltype=CL:0000055!7.90e-20!180;CL:0000057!4.52e-16!75;CL:0002371!1.28e-09!591;CL:0002620!1.72e-09!23;CL:0002494!6.71e-09!16;CL:0000680!2.90e-08!57;CL:0000056!2.90e-08!57;CL:0000355!2.90e-08!57;CL:0000144!2.90e-08!625;CL:0000183!5.20e-08!59;CL:0000048!3.47e-07!430;CL:0000187!5.42e-07!54 | |ontology_enrichment_celltype=CL:0000055!7.90e-20!180;CL:0000057!4.52e-16!75;CL:0002371!1.28e-09!591;CL:0002620!1.72e-09!23;CL:0002494!6.71e-09!16;CL:0000680!2.90e-08!57;CL:0000056!2.90e-08!57;CL:0000355!2.90e-08!57;CL:0000144!2.90e-08!625;CL:0000183!5.20e-08!59;CL:0000048!3.47e-07!430;CL:0000187!5.42e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:1000306;4.77e-10;4!CL:0002547;4.77e-10;4!CL:0002541;8.79e-09;3!CL:0000349;4.08e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,5.93e-10,4;CL:0002547,5.93e-10,4;CL:0002541,1.08e-08,3;CL:0000057,1.22e-08,76;CL:0000349,5.83e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.10e-12!143;UBERON:0000914!2.34e-10!83;UBERON:0002329!2.34e-10!83;UBERON:0003077!2.34e-10!83;UBERON:0003059!2.34e-10!83;UBERON:0007282!2.34e-10!83;UBERON:0009618!2.34e-10!83;UBERON:0007285!2.34e-10!83;UBERON:0004290!2.74e-10!70;UBERON:0003914!7.42e-10!118;UBERON:0004872!8.47e-10!84;UBERON:0000486!3.78e-09!82;UBERON:0002100!7.78e-08!216;UBERON:0002385!8.66e-08!63;UBERON:0001015!8.66e-08!63;UBERON:0000383!8.66e-08!63;UBERON:0007100!9.58e-08!27;UBERON:0001134!1.06e-07!61;UBERON:0002036!1.06e-07!61;UBERON:0003082!1.06e-07!61;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000478!1.13e-07!24;UBERON:0000490!1.32e-07!138;UBERON:0005631!4.39e-07!14;UBERON:0000158!4.39e-07!14;UBERON:0004923!9.19e-07!57 | |ontology_enrichment_uberon=UBERON:0005256!2.10e-12!143;UBERON:0000914!2.34e-10!83;UBERON:0002329!2.34e-10!83;UBERON:0003077!2.34e-10!83;UBERON:0003059!2.34e-10!83;UBERON:0007282!2.34e-10!83;UBERON:0009618!2.34e-10!83;UBERON:0007285!2.34e-10!83;UBERON:0004290!2.74e-10!70;UBERON:0003914!7.42e-10!118;UBERON:0004872!8.47e-10!84;UBERON:0000486!3.78e-09!82;UBERON:0002100!7.78e-08!216;UBERON:0002385!8.66e-08!63;UBERON:0001015!8.66e-08!63;UBERON:0000383!8.66e-08!63;UBERON:0007100!9.58e-08!27;UBERON:0001134!1.06e-07!61;UBERON:0002036!1.06e-07!61;UBERON:0003082!1.06e-07!61;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000478!1.13e-07!24;UBERON:0000490!1.32e-07!138;UBERON:0005631!4.39e-07!14;UBERON:0000158!4.39e-07!14;UBERON:0004923!9.19e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.77e-10;4!UBERON:0000415;4.77e-10;4!UBERON:0007240;4.77e-10;4!UBERON:0005742;4.77e-10;4!UBERON:0005734;4.77e-10;4!UBERON:0004664;4.77e-10;4!UBERON:0004663;4.77e-10;4!UBERON:0003124;8.79e-09;3!UBERON:0000920;8.79e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,5.93e-10,4;UBERON:0007240,5.93e-10,4;UBERON:0005742,5.93e-10,4;UBERON:0005734,5.93e-10,4;UBERON:0004664,5.93e-10,4;UBERON:0004663,5.93e-10,4;UBERON:0000920,1.08e-08,3;UBERON:0007503,1.50e-07,78;UBERON:0007524,1.98e-07,73;UBERON:0003104,2.73e-07,160;UBERON:0009142,2.73e-07,160;UBERON:0002199,4.09e-07,46;UBERON:0002416,4.09e-07,46;UBERON:0005256,6.82e-07,122;UBERON:0002329,8.28e-07,71;UBERON:0003059,8.28e-07,71;UBERON:0007282,8.28e-07,71;UBERON:0004290,8.28e-07,71;UBERON:0009618,8.28e-07,71 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,1.09220686065086,0.791300934685361,0.37129905888014,2.65117900582333,0,0,0,1.46379839637152,0.123121058076788,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.0090986102339,2.01210257911091,0.767175371061182,0,0.50133791063589,0.434539556882471,0.795285947051099,2.91980922181582,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,1.62028389576352,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,3.97577561356255,1.51956613997496,1.32409180813219,3.15520282823695,1.06400514659507,0.560677600142307,0,2.4666754841716,0.311211035399766,0.538842688278752,0.163461903113459,1.21085942115945,16.70910180992,0.234321431833797,1.24864030732128,1.71141546463335,1.64393548606981,0.23486899728753,0.971237666208789,0,0.204154171254893,0.122834317311768,0.619954687054593,1.18800285728205,0.741800787835671,0,0,0,0.375355559615893,0,0,0.919463387397059,0,0.567160915800105,0.538168907066586,0.640672166455702,0.635795703478686,1.80054657650641,0.309157587715317,2.31876486041066,0.18611685633159,1.0126579934476,0.194874010322397,1.00973509697646,0.552299391853796,0.80823028409406,2.84007674013291,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,6.45747818297019,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.358234090811393,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,2.1798003441664,0.07333828582095,0.387815147273333,0,0.845302752556,0.531876233169741,0,0.771622122786426,0,0,0,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0.718874566474748,1.14861935834114,0,0.579125226670317,1.2328579353023,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,2.71265023699736,2.28767947683888,2.49800584316026,0.946214490203608,4.21709093973768,0,0,1.03473071292505,0.664225598535437,1.47495334833363,0.955719759148911,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0.744323423456331,1.84154367945675,0.561320188866147,0,0.511707249066704,0.965123526861645,0,1.07946785661859,1.59805552781814,0.164254312027618,0,0.464841513839837,0.120859449591622,0.200506470303285,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0.784349769176855,0,0.105551628892876,0,0,1.29549549661284,0,0.270946437543853,2.00675909541941,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.290012154876366,0.462145851343933,0.460511024178389,0.137836572484531,1.93356440762893,1.0151168573996,0.511359764496605,0,0.495854746082934,0.576570202095319,2.16941611240793,0.809262246844399,0,2.83331112147576,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0,4.70732886837312,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,3.17020642346017,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.282810863907425,2.26016233240486,0.551365343546124,0,0.876901770507525,0,1.31178950409327,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0.491245205065606,2.1400263088875,0,0.422215270595328,0.658589785919804,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,0.307160702099232,0,0,2.44879151050393,0,0,0,0,0,0,0,4.3545542272653,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,8.29403015302991,1.19076871422421,25.5856692488945,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,3.24269895188163,1.16495949527454,0.236349546921671,0.576911008668165,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0.179287339332845,0,0,0,0,0.542999601753713,0,1.30634944043764,0,0,2.21504428321048,0.113312091520126,0.146552233678082,1.32506888912221,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528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| ||
|short_description=p65@FN1 | |short_description=p65@FN1 | ||
}} | }} |
Latest revision as of 02:24, 20 September 2015
Short description: | p65@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_65_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 300bp_to_ENST00000474036_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 5.93e-10 | 4 |
fibroblast of the aortic adventitia | 5.93e-10 | 4 |
chorionic membrane mesenchymal stem cell | 1.08e-08 | 3 |
fibroblast | 1.22e-08 | 76 |
extraembryonic cell | 5.83e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
artery wall | 5.93e-10 | 4 |
tunica adventitia of artery | 5.93e-10 | 4 |
adventitia | 5.93e-10 | 4 |
tunica adventitia of blood vessel | 5.93e-10 | 4 |
aorta tunica adventitia | 5.93e-10 | 4 |
aorta wall | 5.93e-10 | 4 |
egg chorion | 1.08e-08 | 3 |
epithelial vesicle | 1.50e-07 | 78 |
dense mesenchyme tissue | 1.98e-07 | 73 |
mesenchyme | 2.73e-07 | 160 |
entire embryonic mesenchyme | 2.73e-07 | 160 |
integument | 4.09e-07 | 46 |
integumental system | 4.09e-07 | 46 |
trunk mesenchyme | 6.82e-07 | 122 |
somite | 8.28e-07 | 71 |
presomitic mesoderm | 8.28e-07 | 71 |
presumptive segmental plate | 8.28e-07 | 71 |
dermomyotome | 8.28e-07 | 71 |
trunk paraxial mesoderm | 8.28e-07 | 71 |