FFCP PHASE1:Hg19::chr2:216274317..216274350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=322bp_to_ENST00000471193_5end | |association_with_transcript=322bp_to_ENST00000471193_5end | ||
|cluster_id=chr2:216274317..216274350,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_43_at_FN1_5end | |description=CAGE_peak_43_at_FN1_5end | ||
|id=chr2:216274317..216274350,- | |id=chr2:216274317..216274350,- | ||
|ontology_enrichment_celltype=CL:0000055!4.09e-33!180;CL:0000057!1.13e-24!75;CL:0000680!1.71e-13!57;CL:0000056!1.71e-13!57;CL:0000355!1.71e-13!57;CL:0000183!2.79e-13!59;CL:0002371!1.79e-12!591;CL:0000187!3.62e-12!54;CL:0000144!8.42e-11!625;CL:0000393!1.63e-09!60;CL:0000211!1.63e-09!60;CL:0002620!9.93e-09!23;CL:0002334!2.41e-08!12;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42;CL:0002494!3.96e-08!16;CL:0002321!6.07e-08!248;CL:0000048!6.65e-08!430;CL:0000220!6.98e-08!246;CL:0000359!1.15e-07!32;CL:0000723!1.28e-07!436;CL:0000034!1.66e-07!444 | |ontology_enrichment_celltype=CL:0000055!4.09e-33!180;CL:0000057!1.13e-24!75;CL:0000680!1.71e-13!57;CL:0000056!1.71e-13!57;CL:0000355!1.71e-13!57;CL:0000183!2.79e-13!59;CL:0002371!1.79e-12!591;CL:0000187!3.62e-12!54;CL:0000144!8.42e-11!625;CL:0000393!1.63e-09!60;CL:0000211!1.63e-09!60;CL:0002620!9.93e-09!23;CL:0002334!2.41e-08!12;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42;CL:0002494!3.96e-08!16;CL:0002321!6.07e-08!248;CL:0000048!6.65e-08!430;CL:0000220!6.98e-08!246;CL:0000359!1.15e-07!32;CL:0000723!1.28e-07!436;CL:0000034!1.66e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000723;8.32e-12;61!CL:0000134;8.40e-12;55!CL:0002620;6.21e-11;23!CL:0000057;1.06e-10;73!CL:0000048;3.15e-10;58!CL:0002334;3.28e-10;12!CL:0002320;5.28e-10;188!CL:0002494;1.97e-08;16!CL:0000499;2.54e-08;28!CL:0000034;3.06e-08;69!CL:0000187;6.76e-07;55!CL:0000349;6.78e-07;19!CL:0000327;9.16e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-29,76;CL:0000048,3.37e-19,427;CL:0000723,3.75e-18,433;CL:0000034,3.61e-17,441;CL:0002320,6.10e-12,361;CL:0000680,8.97e-12,58;CL:0000056,8.97e-12,58;CL:0000355,8.97e-12,58;CL:0002620,1.03e-10,23;CL:0000187,2.75e-10,55;CL:0002334,2.90e-10,12;CL:0000134,3.97e-10,354;CL:0000499,2.15e-08,28;CL:0002494,2.53e-08,16;CL:0000393,3.69e-08,61;CL:0000211,3.69e-08,61;CL:0000219,1.06e-07,386;CL:0000349,6.36e-07,19;CL:0000327,6.97e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;3.66e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.22e-15!83;UBERON:0002329!1.22e-15!83;UBERON:0003077!1.22e-15!83;UBERON:0003059!1.22e-15!83;UBERON:0007282!1.22e-15!83;UBERON:0009618!1.22e-15!83;UBERON:0007285!1.22e-15!83;UBERON:0005256!4.21e-15!143;UBERON:0004290!1.61e-13!70;UBERON:0000486!1.11e-12!82;UBERON:0004872!4.09e-12!84;UBERON:0001134!5.25e-12!61;UBERON:0002036!5.25e-12!61;UBERON:0003082!5.25e-12!61;UBERON:0003914!7.27e-12!118;UBERON:0002385!1.35e-11!63;UBERON:0001015!1.35e-11!63;UBERON:0000383!1.35e-11!63;UBERON:0002100!9.93e-10!216;UBERON:0002049!1.47e-09!79;UBERON:0007798!1.47e-09!79;UBERON:0000490!2.00e-09!138;UBERON:0000468!4.05e-09!659;UBERON:0001637!4.41e-09!42;UBERON:0003509!4.41e-09!42;UBERON:0004572!4.41e-09!42;UBERON:0003102!5.29e-09!95;UBERON:0000475!6.76e-09!365;UBERON:0004535!8.45e-09!110;UBERON:0001009!1.67e-08!113;UBERON:0000948!2.33e-08!24;UBERON:0005498!2.33e-08!24;UBERON:0004140!2.33e-08!24;UBERON:0009881!2.33e-08!24;UBERON:0004141!2.33e-08!24;UBERON:0003084!2.33e-08!24;UBERON:0007005!2.33e-08!24;UBERON:0004139!2.33e-08!24;UBERON:0004291!2.33e-08!24;UBERON:0002199!2.81e-08!45;UBERON:0002416!2.81e-08!45;UBERON:0000119!3.40e-08!312;UBERON:0000483!1.06e-07!309;UBERON:0000055!1.51e-07!69;UBERON:0004923!1.64e-07!57;UBERON:0007100!2.14e-07!27;UBERON:0001981!2.26e-07!60;UBERON:0007500!2.26e-07!60;UBERON:0004537!2.26e-07!60;UBERON:0006965!2.26e-07!60;UBERON:0004573!4.83e-07!33;UBERON:0004571!4.83e-07!33;UBERON:0002097!7.85e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!1.22e-15!83;UBERON:0002329!1.22e-15!83;UBERON:0003077!1.22e-15!83;UBERON:0003059!1.22e-15!83;UBERON:0007282!1.22e-15!83;UBERON:0009618!1.22e-15!83;UBERON:0007285!1.22e-15!83;UBERON:0005256!4.21e-15!143;UBERON:0004290!1.61e-13!70;UBERON:0000486!1.11e-12!82;UBERON:0004872!4.09e-12!84;UBERON:0001134!5.25e-12!61;UBERON:0002036!5.25e-12!61;UBERON:0003082!5.25e-12!61;UBERON:0003914!7.27e-12!118;UBERON:0002385!1.35e-11!63;UBERON:0001015!1.35e-11!63;UBERON:0000383!1.35e-11!63;UBERON:0002100!9.93e-10!216;UBERON:0002049!1.47e-09!79;UBERON:0007798!1.47e-09!79;UBERON:0000490!2.00e-09!138;UBERON:0000468!4.05e-09!659;UBERON:0001637!4.41e-09!42;UBERON:0003509!4.41e-09!42;UBERON:0004572!4.41e-09!42;UBERON:0003102!5.29e-09!95;UBERON:0000475!6.76e-09!365;UBERON:0004535!8.45e-09!110;UBERON:0001009!1.67e-08!113;UBERON:0000948!2.33e-08!24;UBERON:0005498!2.33e-08!24;UBERON:0004140!2.33e-08!24;UBERON:0009881!2.33e-08!24;UBERON:0004141!2.33e-08!24;UBERON:0003084!2.33e-08!24;UBERON:0007005!2.33e-08!24;UBERON:0004139!2.33e-08!24;UBERON:0004291!2.33e-08!24;UBERON:0002199!2.81e-08!45;UBERON:0002416!2.81e-08!45;UBERON:0000119!3.40e-08!312;UBERON:0000483!1.06e-07!309;UBERON:0000055!1.51e-07!69;UBERON:0004923!1.64e-07!57;UBERON:0007100!2.14e-07!27;UBERON:0001981!2.26e-07!60;UBERON:0007500!2.26e-07!60;UBERON:0004537!2.26e-07!60;UBERON:0006965!2.26e-07!60;UBERON:0004573!4.83e-07!33;UBERON:0004571!4.83e-07!33;UBERON:0002097!7.85e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.62e-09;198!UBERON:0001013;6.76e-08;14 | |||
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| ||
|short_description=p43@FN1 | |short_description=p43@FN1 | ||
}} | }} |
Latest revision as of 04:00, 20 September 2015
Short description: | p43@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 322bp_to_ENST00000471193_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-29 | 76 |
multi fate stem cell | 3.37e-19 | 427 |
somatic stem cell | 3.75e-18 | 433 |
stem cell | 3.61e-17 | 441 |
connective tissue cell | 6.10e-12 | 361 |
muscle precursor cell | 8.97e-12 | 58 |
myoblast | 8.97e-12 | 58 |
multi-potent skeletal muscle stem cell | 8.97e-12 | 58 |
skin fibroblast | 1.03e-10 | 23 |
muscle cell | 2.75e-10 | 55 |
preadipocyte | 2.90e-10 | 12 |
mesenchymal cell | 3.97e-10 | 354 |
stromal cell | 2.15e-08 | 28 |
cardiocyte | 2.53e-08 | 16 |
electrically responsive cell | 3.69e-08 | 61 |
electrically active cell | 3.69e-08 | 61 |
motile cell | 1.06e-07 | 386 |
extraembryonic cell | 6.36e-07 | 19 |
extracellular matrix secreting cell | 6.97e-07 | 15 |