FFCP PHASE1:Hg19::chr4:103423079..103423112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |EntrezGene=4790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |HGNC=7794 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000505458_5end | |association_with_transcript=24bp_to_ENST00000505458_5end | ||
|cluster_id=chr4:103423079..103423112,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_NFKB1_5end | |description=CAGE_peak_4_at_NFKB1_5end | ||
|id=chr4:103423079..103423112,+ | |id=chr4:103423079..103423112,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.35e-31!42;CL:0000860!3.27e-29!45;CL:0000766!5.97e-29!76;CL:0000557!1.07e-25!71;CL:0002009!5.09e-24!65;CL:0000839!1.11e-23!70;CL:0000763!3.14e-23!112;CL:0000049!3.14e-23!112;CL:0002194!8.65e-23!63;CL:0000576!8.65e-23!63;CL:0000040!8.65e-23!63;CL:0000559!8.65e-23!63;CL:0000738!9.50e-21!140;CL:0000037!2.19e-17!172;CL:0000566!2.19e-17!172;CL:0002032!3.08e-16!165;CL:0000837!3.08e-16!165;CL:0002031!8.78e-15!124;CL:0002087!3.59e-14!119;CL:0000988!3.66e-14!182;CL:0000134!2.36e-11!358;CL:0002320!4.36e-10!365;CL:0000063!6.21e-10!578;CL:0000048!6.36e-08!430;CL:0000219!6.53e-08!390;CL:0002393!1.45e-07!9;CL:0002397!1.45e-07!9;CL:0000723!1.65e-07!436;CL:0000034!4.17e-07!444 | |ontology_enrichment_celltype=CL:0002057!1.35e-31!42;CL:0000860!3.27e-29!45;CL:0000766!5.97e-29!76;CL:0000557!1.07e-25!71;CL:0002009!5.09e-24!65;CL:0000839!1.11e-23!70;CL:0000763!3.14e-23!112;CL:0000049!3.14e-23!112;CL:0002194!8.65e-23!63;CL:0000576!8.65e-23!63;CL:0000040!8.65e-23!63;CL:0000559!8.65e-23!63;CL:0000738!9.50e-21!140;CL:0000037!2.19e-17!172;CL:0000566!2.19e-17!172;CL:0002032!3.08e-16!165;CL:0000837!3.08e-16!165;CL:0002031!8.78e-15!124;CL:0002087!3.59e-14!119;CL:0000988!3.66e-14!182;CL:0000134!2.36e-11!358;CL:0002320!4.36e-10!365;CL:0000063!6.21e-10!578;CL:0000048!6.36e-08!430;CL:0000219!6.53e-08!390;CL:0002393!1.45e-07!9;CL:0002397!1.45e-07!9;CL:0000723!1.65e-07!436;CL:0000034!4.17e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.69e-49;33!CL:0002057;9.69e-49;33!CL:0000473;2.90e-35;39!CL:0000234;2.90e-35;39!CL:0000576;3.85e-35;48!CL:0000766;1.47e-28;69!CL:0000763;3.83e-13;100!CL:0002393;5.94e-11;6!CL:0002397;5.94e-11;6!CL:0000738;4.99e-10;136!CL:0002087;2.17e-09;104!CL:0000094;6.84e-08;8!CL:0000451;2.27e-07;10!CL:0000990;2.82e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-67,42;CL:0002057,2.93e-67,42;CL:0000766,1.66e-62,72;CL:0000473,1.05e-59,48;CL:0000234,1.05e-59,48;CL:0000557,3.96e-57,67;CL:0002009,4.14e-54,61;CL:0000839,2.79e-53,66;CL:0002194,2.42e-51,59;CL:0000576,2.42e-51,59;CL:0000040,2.42e-51,59;CL:0000559,2.42e-51,59;CL:0000763,1.32e-48,108;CL:0000049,1.32e-48,108;CL:0000738,9.32e-39,136;CL:0000037,8.05e-32,168;CL:0002032,3.80e-29,161;CL:0000837,3.80e-29,161;CL:0000988,4.22e-29,177;CL:0002031,6.39e-28,120;CL:0002087,4.90e-26,115;CL:0002393,1.25e-14,9;CL:0002397,1.25e-14,9;CL:0000134,6.10e-10,354;CL:0002320,2.35e-09,361;CL:0000094,7.13e-08,8;CL:0000451,1.08e-07,10;CL:0000990,1.36e-07,8;CL:0000219,2.42e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-48;42!CL:0000049;2.01e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.80e-23!86;UBERON:0002371!4.48e-23!80;UBERON:0004765!1.21e-19!101;UBERON:0001434!1.21e-19!101;UBERON:0002390!3.96e-17!102;UBERON:0003061!3.96e-17!102;UBERON:0002405!8.99e-16!115;UBERON:0002193!1.40e-14!112;UBERON:0002204!3.89e-11!167;UBERON:0002384!1.62e-10!375 | |ontology_enrichment_uberon=UBERON:0001474!1.80e-23!86;UBERON:0002371!4.48e-23!80;UBERON:0004765!1.21e-19!101;UBERON:0001434!1.21e-19!101;UBERON:0002390!3.96e-17!102;UBERON:0003061!3.96e-17!102;UBERON:0002405!8.99e-16!115;UBERON:0002193!1.40e-14!112;UBERON:0002204!3.89e-11!167;UBERON:0002384!1.62e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.08e-52,76;UBERON:0001474,6.47e-47,82;UBERON:0002390,1.14e-41,98;UBERON:0003061,1.14e-41,98;UBERON:0004765,3.57e-41,90;UBERON:0002405,2.81e-39,93;UBERON:0001434,9.26e-37,100;UBERON:0002193,4.18e-36,108;UBERON:0002204,8.63e-18,167;UBERON:0003081,5.80e-14,203;UBERON:0002384,7.34e-10,371 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,1.34088328328186,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,4.32700704533794,0.767658796194425,4.02521920621798,0,0.30120591877825,0,0.0774672005803016,0,0.293600439334847,14.4038806218288,15.2413780077308,10.8505435357926,0,0,0,3.05336301437086,3.40088349319928,4.60909716256851,15.1078873988695,8.63452564845834,17.0338503992307,15.5353891853961,7.68482119587302,12.533558184095,28.2691458204027,28.4013260776883,29.7938270507552,7.52969358170419,11.4620583024295,12.8092386133698,28.159718098123,28.2417543826962,31.9668562899521,4.28806690242731,3.39088217956774,7.2458207590558,30.7621792946299,31.7735725827038,41.1062684337079,6.78371396193207,6.25779502104242,8.47036494349955,20.5835830895345,30.9353214229554,30.3803891943249,4.43636101255078,13.6066751977628,7.33805259279316,2.47122988522289,3.90459921387916,3.05378614724452,1.71007646244749,2.18808344918999,3.28795476776341,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,2.93618594685469,0.382273228125229,1.32171328579026,1.12101712596307,0,0.786839080455332,0.786021525498329,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.602300476311091,0.383959833463255,0,0,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0.670700859703636,0,0,0.50133791063589,0,0,0,1.13441780596881,0.886917589850256,0.087834785693126,0.0654895377488563,0,0.741568885568859,1.9472843619281,1.74129737299267,0.797747763113191,1.43094374583205,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,36.8985168820977,23.2668158488995,0,1.49091585508596,0.12663051166458,0.926864265692532,0,0,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0.570471821544449,0.149448680551801,0.352303495931295,0.647491777472526,0.421352420106746,0.61246251376468,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0,0.505008341862199,0,0.554128230968366,0,0.30648779579902,1.35214253015937,0.340296549480063,0,0.427114777637135,0.635795703478686,0.600182192168805,0.618315175430633,0.257640540045629,0,0.337552664482532,0.584622030967192,0.252433774244115,0.0920498986422993,1.2931684545505,0.355009592516614,0,1.18692414617341,0.386521706326594,0.272746120590835,2.00763216772303,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,1.18157981336281,0,1.59884970106048,0,0.329250856225877,0,0,0.185176890317059,0,0,0,0,0.821860859650752,0,0.925971025153221,0.380508304469197,0.790204397959275,3.43394464837949,0.738651018262192,1.8720341211139,0.594524649154913,0,0.16798212819886,0,0,0,0,1.97065295158377,0.44024217006613,2.90259361757081,2.16179930125442,2.90357596880674,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0.775630294546667,0,0,0,0,1.02882949704857,0,0.532844358032199,0,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0.788123040807709,0.646882724578552,1.28343036279748,0,0,0,0,0,5.24304916763028,0,8.28831026872071,0,0,0,0.207970861530807,0,1.73472656537328,0.117141414992713,0,2.27407504055985,0,0,0,1.04260337361699,0,0,4.13536052245775,6.03999762292127,2.66818894508611,0.909382714338778,1.66435439510497,0.604780586659361,0.744323423456331,0.153461973288062,0,0.896974044789907,0,0.160853921143607,0,0,0,0.328508624055237,0,0.232420756919918,0.966875596732978,0,0.920809889358963,0.229628896329213,0.546273504020151,0.131124414959424,0,0.539107359730903,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.309123034943167,0.457847324091717,0.742585499285292,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.429680979473094,0,0,0.0890320356467374,0,1.34533047155574,1.02090169995667,0,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0.359744915166629,0,0,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,1.50149902548784,0,0,0.551365343546124,0.66343897524122,2.63070531152258,0,0,0.405820753925408,0.6196469961995,0,0,0,2.85336841185,0.709522128141196,0.211107635297664,0,0,0,0,1.34060455107157,1.08890984861323,0.282431402330337,0,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0,0,0,0.766021480529467,1.69338866179106,0,1.68478306868075,0,0,0,1.86220955581764,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0.66614393599564,1.4098700508785,1.8714054040822,0.146508179271894,0,0,0,0,0.890894042497916,0.614321404198464,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0.552567831062295,0,0,0.123084805461069,0,0.179736702294654,0.895105873378046,0,0,0,1.11136990144637,0,0,0,1.04171104434093,1.39935999993913,0,2.04828206913899,2.0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| ||
|short_description=p4@NFKB1 | |short_description=p4@NFKB1 | ||
}} | }} |
Latest revision as of 04:02, 20 September 2015
Short description: | p4@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFKB1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 24bp_to_ENST00000505458_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.93e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-67 | 42 |
myeloid leukocyte | 1.66e-62 | 72 |
defensive cell | 1.05e-59 | 48 |
phagocyte | 1.05e-59 | 48 |
granulocyte monocyte progenitor cell | 3.96e-57 | 67 |
macrophage dendritic cell progenitor | 4.14e-54 | 61 |
myeloid lineage restricted progenitor cell | 2.79e-53 | 66 |
monopoietic cell | 2.42e-51 | 59 |
monocyte | 2.42e-51 | 59 |
monoblast | 2.42e-51 | 59 |
promonocyte | 2.42e-51 | 59 |
myeloid cell | 1.32e-48 | 108 |
common myeloid progenitor | 1.32e-48 | 108 |
leukocyte | 9.32e-39 | 136 |
hematopoietic stem cell | 8.05e-32 | 168 |
hematopoietic oligopotent progenitor cell | 3.80e-29 | 161 |
hematopoietic multipotent progenitor cell | 3.80e-29 | 161 |
hematopoietic cell | 4.22e-29 | 177 |
hematopoietic lineage restricted progenitor cell | 6.39e-28 | 120 |
nongranular leukocyte | 4.90e-26 | 115 |
intermediate monocyte | 1.25e-14 | 9 |
CD14-positive, CD16-positive monocyte | 1.25e-14 | 9 |
mesenchymal cell | 6.10e-10 | 354 |
connective tissue cell | 2.35e-09 | 361 |
granulocyte | 7.13e-08 | 8 |
dendritic cell | 1.08e-07 | 10 |
conventional dendritic cell | 1.36e-07 | 8 |
motile cell | 2.42e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.08e-52 | 76 |
bone element | 6.47e-47 | 82 |
hematopoietic system | 1.14e-41 | 98 |
blood island | 1.14e-41 | 98 |
skeletal element | 3.57e-41 | 90 |
immune system | 2.81e-39 | 93 |
skeletal system | 9.26e-37 | 100 |
hemolymphoid system | 4.18e-36 | 108 |
musculoskeletal system | 8.63e-18 | 167 |
lateral plate mesoderm | 5.80e-14 | 203 |
connective tissue | 7.34e-10 | 371 |