FFCP PHASE1:Hg19::chr4:103423249..103423258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |EntrezGene=4790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |HGNC=7794 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=194bp_to_ENST00000505458_5end | |association_with_transcript=194bp_to_ENST00000505458_5end | ||
|cluster_id=chr4:103423249..103423258,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_43_at_NFKB1_5end | |description=CAGE_peak_43_at_NFKB1_5end | ||
|id=chr4:103423249..103423258,+ | |id=chr4:103423249..103423258,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.85e-34!140;CL:0000766!5.85e-31!76;CL:0000037!2.16e-26!172;CL:0000566!2.16e-26!172;CL:0000988!1.38e-24!182;CL:0002032!5.30e-24!165;CL:0000837!5.30e-24!165;CL:0002031!1.25e-22!124;CL:0002087!7.32e-22!119;CL:0002057!7.42e-22!42;CL:0000860!3.40e-20!45;CL:0000839!6.98e-20!70;CL:0000557!1.50e-19!71;CL:0000763!1.88e-19!112;CL:0000049!1.88e-19!112;CL:0000094!1.94e-16!8;CL:0002194!2.24e-15!63;CL:0000576!2.24e-15!63;CL:0000040!2.24e-15!63;CL:0000559!2.24e-15!63;CL:0002009!8.22e-15!65;CL:0000771!4.16e-12!2;CL:0000081!6.85e-12!11;CL:0000134!4.98e-11!358;CL:0002320!1.10e-10!365;CL:0000791!7.92e-10!18;CL:0000789!7.92e-10!18;CL:0002420!7.92e-10!18;CL:0002419!7.92e-10!18;CL:0000790!7.92e-10!18;CL:0002274!1.78e-09!5;CL:0000457!1.78e-09!5;CL:0002191!1.78e-09!5;CL:0000097!1.78e-09!5;CL:0000831!1.78e-09!5;CL:0002028!1.78e-09!5;CL:0000219!1.83e-09!390;CL:0000624!2.18e-08!6;CL:0000623!4.09e-08!3;CL:0000825!4.09e-08!3;CL:0000048!5.31e-08!430;CL:0000723!8.57e-08!436;CL:0000767!9.72e-08!3;CL:0000842!1.11e-07!3;CL:0000034!1.59e-07!444;CL:0000084!6.55e-07!25;CL:0000827!6.55e-07!25 | |ontology_enrichment_celltype=CL:0000738!6.85e-34!140;CL:0000766!5.85e-31!76;CL:0000037!2.16e-26!172;CL:0000566!2.16e-26!172;CL:0000988!1.38e-24!182;CL:0002032!5.30e-24!165;CL:0000837!5.30e-24!165;CL:0002031!1.25e-22!124;CL:0002087!7.32e-22!119;CL:0002057!7.42e-22!42;CL:0000860!3.40e-20!45;CL:0000839!6.98e-20!70;CL:0000557!1.50e-19!71;CL:0000763!1.88e-19!112;CL:0000049!1.88e-19!112;CL:0000094!1.94e-16!8;CL:0002194!2.24e-15!63;CL:0000576!2.24e-15!63;CL:0000040!2.24e-15!63;CL:0000559!2.24e-15!63;CL:0002009!8.22e-15!65;CL:0000771!4.16e-12!2;CL:0000081!6.85e-12!11;CL:0000134!4.98e-11!358;CL:0002320!1.10e-10!365;CL:0000791!7.92e-10!18;CL:0000789!7.92e-10!18;CL:0002420!7.92e-10!18;CL:0002419!7.92e-10!18;CL:0000790!7.92e-10!18;CL:0002274!1.78e-09!5;CL:0000457!1.78e-09!5;CL:0002191!1.78e-09!5;CL:0000097!1.78e-09!5;CL:0000831!1.78e-09!5;CL:0002028!1.78e-09!5;CL:0000219!1.83e-09!390;CL:0000624!2.18e-08!6;CL:0000623!4.09e-08!3;CL:0000825!4.09e-08!3;CL:0000048!5.31e-08!430;CL:0000723!8.57e-08!436;CL:0000767!9.72e-08!3;CL:0000842!1.11e-07!3;CL:0000034!1.59e-07!444;CL:0000084!6.55e-07!25;CL:0000827!6.55e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.34e-40;2!CL:0002393;1.52e-30;6!CL:0002397;1.52e-30;6!CL:0000094;5.98e-11;8!CL:0000576;1.38e-08;48!CL:0000081;3.25e-08;11!CL:0000766;8.49e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.64e-40,2;CL:0002393,1.16e-20,9;CL:0002397,1.16e-20,9;CL:0000766,4.69e-17,72;CL:0000860,6.21e-17,42;CL:0002057,6.21e-17,42;CL:0000473,8.14e-15,48;CL:0000234,8.14e-15,48;CL:0000738,4.83e-14,136;CL:0002194,7.65e-12,59;CL:0000576,7.65e-12,59;CL:0000040,7.65e-12,59;CL:0000559,7.65e-12,59;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0002009,1.85e-11,61;CL:0000763,2.60e-11,108;CL:0000049,2.60e-11,108;CL:0000037,2.70e-11,168;CL:0000094,6.29e-11,8;CL:0000988,1.07e-10,177;CL:0000839,1.35e-10,66;CL:0002087,1.36e-10,115;CL:0000557,1.94e-10,67;CL:0002031,3.86e-10,120;CL:0000081,3.37e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.85e-17!86;UBERON:0002371!6.25e-17!80;UBERON:0004765!5.12e-16!101;UBERON:0001434!5.12e-16!101;UBERON:0002390!8.88e-16!102;UBERON:0003061!8.88e-16!102;UBERON:0002193!5.46e-14!112;UBERON:0002405!1.25e-10!115;UBERON:0002384!3.27e-10!375;UBERON:0002204!5.13e-08!167 | |ontology_enrichment_uberon=UBERON:0001474!1.85e-17!86;UBERON:0002371!6.25e-17!80;UBERON:0004765!5.12e-16!101;UBERON:0001434!5.12e-16!101;UBERON:0002390!8.88e-16!102;UBERON:0003061!8.88e-16!102;UBERON:0002193!5.46e-14!112;UBERON:0002405!1.25e-10!115;UBERON:0002384!3.27e-10!375;UBERON:0002204!5.13e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-09,76;UBERON:0001474,1.57e-08,82;UBERON:0004765,9.11e-08,90;UBERON:0002405,1.63e-07,93;UBERON:0002390,3.99e-07,98;UBERON:0003061,3.99e-07,98;UBERON:0001434,5.57e-07,100 | |||
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|short_description=p43@NFKB1 | |short_description=p43@NFKB1 | ||
}} | }} |
Latest revision as of 04:05, 20 September 2015
Short description: | p43@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_NFKB1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 194bp_to_ENST00000505458_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.64e-40 | 2 |
intermediate monocyte | 1.16e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.16e-20 | 9 |
myeloid leukocyte | 4.69e-17 | 72 |
classical monocyte | 6.21e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-17 | 42 |
defensive cell | 8.14e-15 | 48 |
phagocyte | 8.14e-15 | 48 |
leukocyte | 4.83e-14 | 136 |
monopoietic cell | 7.65e-12 | 59 |
monocyte | 7.65e-12 | 59 |
monoblast | 7.65e-12 | 59 |
promonocyte | 7.65e-12 | 59 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
macrophage dendritic cell progenitor | 1.85e-11 | 61 |
myeloid cell | 2.60e-11 | 108 |
common myeloid progenitor | 2.60e-11 | 108 |
hematopoietic stem cell | 2.70e-11 | 168 |
granulocyte | 6.29e-11 | 8 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.35e-10 | 66 |
nongranular leukocyte | 1.36e-10 | 115 |
granulocyte monocyte progenitor cell | 1.94e-10 | 67 |
hematopoietic lineage restricted progenitor cell | 3.86e-10 | 120 |
blood cell | 3.37e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-09 | 76 |
bone element | 1.57e-08 | 82 |
skeletal element | 9.11e-08 | 90 |
immune system | 1.63e-07 | 93 |
hematopoietic system | 3.99e-07 | 98 |
blood island | 3.99e-07 | 98 |
skeletal system | 5.57e-07 | 100 |