FFCP PHASE1:Hg19::chr14:51955873..51955899,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:51955873..51955899,+ to FFCP PHASE1:Hg19::chr14:51955873..51955899,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NE9 | |UniProt=Q96NE9 | ||
|association_with_transcript=18bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end | |||
|cluster_id=chr14:51955873..51955899,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_12_at_FRMD6_5end | |||
|id=chr14:51955873..51955899,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.22e-33!43;CL:0000223!3.96e-24!59;CL:0000066!2.15e-20!254;CL:0002159!5.50e-20!13;CL:0002368!6.09e-20!13;CL:0002251!1.05e-18!21;CL:0000076!1.44e-14!62;CL:0000244!1.13e-11!4;CL:0000731!1.13e-11!4;CL:0002202!1.22e-10!9;CL:0002632!1.22e-10!9;CL:0002166!1.08e-09!3;CL:0002621!1.65e-09!3;CL:0002077!1.74e-09!33;CL:0000068!3.10e-09!3;CL:0000069!3.10e-09!3;CL:0000307!3.10e-09!3;CL:0000377!3.10e-09!3;CL:0000622!3.46e-09!5;CL:0002328!7.74e-09!3;CL:0000362!8.59e-09!8;CL:0000240!7.85e-08!6;CL:0000311!7.85e-08!6;CL:0000079!7.85e-08!6;CL:0000237!7.85e-08!6;CL:0000036!7.85e-08!6;CL:0000357!7.85e-08!6;CL:0000114!7.85e-08!6;CL:0000220!1.08e-07!246;CL:0000154!1.21e-07!6;CL:0002321!1.49e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.16e-31;42!CL:0002368;2.86e-29;13!CL:0002159;1.99e-27;14!CL:0002251;3.58e-18;20!CL:0000244;1.24e-16;4!CL:0000731;1.24e-16;4!CL:0002202;2.20e-15;9!CL:0002632;2.20e-15;9!CL:0002166;1.11e-13;3!CL:0002621;2.24e-13;3!CL:0000622;4.38e-13;5!CL:0000307;6.74e-13;3!CL:0002328;3.12e-12;3!CL:0000362;2.45e-11;9!CL:0000240;3.17e-11;6!CL:0000311;3.17e-11;6!CL:0000079;3.17e-11;6!CL:0000237;3.17e-11;6!CL:0002077;4.71e-11;34!CL:0000154;6.44e-11;6!CL:0000317;4.29e-09;2!CL:1000448;4.29e-09;2!CL:0002308;4.29e-09;2!CL:0002140;4.29e-09;2!CL:0000575;2.26e-08;2!CL:0000312;3.90e-08;5!CL:0000150;2.72e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.99e-41,42;CL:0002368,1.66e-29,13;CL:0000223,3.52e-28,58;CL:0002159,2.57e-27,14;CL:0000066,1.63e-21,253;CL:0002251,3.52e-18,20;CL:0000244,1.29e-16,4;CL:0000731,1.29e-16,4;CL:0002202,1.51e-15,9;CL:0002632,1.51e-15,9;CL:0002166,1.16e-13,3;CL:0002621,2.15e-13,3;CL:0000622,4.18e-13,5;CL:0000068,5.51e-13,3;CL:0000069,5.51e-13,3;CL:0000307,5.51e-13,3;CL:0000377,5.51e-13,3;CL:0002328,2.15e-12,3;CL:0002077,3.04e-12,34;CL:0000362,2.56e-11,9;CL:0000240,3.22e-11,6;CL:0000311,3.22e-11,6;CL:0000079,3.22e-11,6;CL:0000237,3.22e-11,6;CL:0000036,3.22e-11,6;CL:0000357,3.22e-11,6;CL:0000114,3.22e-11,6;CL:0000154,6.20e-11,6;CL:0000076,1.17e-10,63;CL:0002321,1.56e-10,250;CL:0000317,4.47e-09,2;CL:1000448,4.47e-09,2;CL:0002308,4.47e-09,2;CL:0002140,4.47e-09,2;CL:0000575,2.85e-08,2;CL:0000312,3.99e-08,5;CL:0000150,2.65e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.98e-14;58!CL:0000377;6.74e-13;3!CL:0000357;3.17e-11;6!CL:0000114;3.17e-11;6!UBERON:0008814;6.05e-09;2!UBERON:0010056;6.05e-09;2 | |||
|ontology_enrichment_disease=DOID:1749!3.91e-24!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.03e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.40e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!6.68e-20!35;UBERON:0001004!9.47e-17!72;UBERON:0000166!5.10e-16!21;UBERON:0004119!2.36e-15!169;UBERON:0000925!2.36e-15!169;UBERON:0006595!2.36e-15!169;UBERON:0003102!2.04e-14!95;UBERON:0000365!5.03e-14!5;UBERON:0003729!1.89e-13!5;UBERON:0000165!2.20e-13!28;UBERON:0000930!2.20e-13!28;UBERON:0005910!1.30e-11!6;UBERON:0003343!4.38e-11!4;UBERON:0004785!4.38e-11!4;UBERON:0007196!5.06e-11!14;UBERON:0001558!5.06e-11!14;UBERON:0000065!2.63e-10!53;UBERON:0000344!5.69e-10!12;UBERON:0001949!1.65e-09!3;UBERON:0001007!1.91e-09!155;UBERON:0001555!1.91e-09!155;UBERON:0007026!1.91e-09!155;UBERON:0003126!2.22e-09!7;UBERON:0001005!2.22e-09!7;UBERON:0001444!6.19e-09!48;UBERON:0004815!7.74e-09!3;UBERON:0002031!7.74e-09!3;UBERON:0001723!1.62e-08!3;UBERON:0001033!1.62e-08!3;UBERON:0010056!1.62e-08!3;UBERON:0001708!2.46e-07!4;UBERON:0001704!2.46e-07!4;UBERON:0005178!5.22e-07!34;UBERON:0002224!5.22e-07!34;UBERON:0005181!9.58e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;9.95e-21;12!UBERON:0000365;3.81e-20;5!UBERON:0005910;9.54e-17;6!UBERON:0003729;1.67e-14;13!UBERON:0001949;2.24e-13;3!UBERON:0000165;1.53e-12;28!UBERON:0000161;1.76e-12;19!UBERON:0000166;1.76e-12;19!UBERON:0004815;3.12e-12;3!UBERON:0002031;3.12e-12;3!UBERON:0000344;1.01e-11;20!UBERON:0001708;2.30e-10;4!UBERON:0008895;2.30e-10;4!UBERON:0003343;1.33e-09;4!UBERON:0004785;1.33e-09;4!UBERON:0005911;3.20e-09;36!UBERON:0002419;4.29e-09;2!UBERON:0007771;4.29e-09;2!UBERON:0003297;4.29e-09;2!UBERON:0001821;4.29e-09;2!UBERON:0003487;4.29e-09;2!UBERON:0001820;4.29e-09;2!UBERON:0007196;5.61e-09;15!UBERON:0001558;5.61e-09;15!UBERON:0003350;1.81e-08;8!UBERON:0011159;2.29e-08;5!UBERON:0002185;1.61e-07;5!UBERON:0010371;2.91e-07;31!UBERON:0001004;3.77e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.05e-20,5;UBERON:0003102,1.38e-17,99;UBERON:0005910,1.00e-16,6;UBERON:0001004,3.47e-15,74;UBERON:0003729,1.59e-14,13;UBERON:0004119,5.90e-14,160;UBERON:0000925,5.90e-14,160;UBERON:0006595,5.90e-14,160;UBERON:0000161,1.54e-13,36;UBERON:0000166,2.09e-13,22;UBERON:0001949,2.15e-13,3;UBERON:0000033,9.46e-13,56;UBERON:0004815,2.15e-12,3;UBERON:0002031,2.15e-12,3;UBERON:0000165,4.80e-12,29;UBERON:0000930,4.80e-12,29;UBERON:0000344,9.84e-12,20;UBERON:0000153,3.46e-11,62;UBERON:0007811,3.46e-11,62;UBERON:0001708,2.37e-10,4;UBERON:0008895,2.37e-10,4;UBERON:0003343,1.29e-09,4;UBERON:0004785,1.29e-09,4;UBERON:0001444,3.76e-09,49;UBERON:0002419,4.47e-09,2;UBERON:0007771,4.47e-09,2;UBERON:0003297,4.47e-09,2;UBERON:0001821,4.47e-09,2;UBERON:0003487,4.47e-09,2;UBERON:0001820,4.47e-09,2;UBERON:0005089,4.47e-09,2;UBERON:0005088,4.47e-09,2;UBERON:0007196,4.53e-09,15;UBERON:0001558,4.53e-09,15;UBERON:0003350,1.79e-08,8;UBERON:0011159,2.34e-08,5;UBERON:0000065,3.03e-08,54;UBERON:0002185,1.30e-07,5;UBERON:0010188,5.08e-07,6;UBERON:0002539,5.08e-07,6;UBERON:0008816,5.08e-07,6;UBERON:0001007,5.18e-07,145;UBERON:0001555,5.18e-07,145;UBERON:0007026,5.18e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.8072355126695,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,5.02478218224572,6.81865301477087,3.44165514466805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7192622725709,6.74410519545717,3.11639814476056,2.4998880192803,0,0,0,0,0,0,0,0,0,0,0,0,0,12.185398418281,9.23901705093727,4.53680311175637,3.94057499892532,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81215528727884,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01985876597321,2.60024098414608,0,0,0,0,0,0,0,0,0,5.61968712227326,5.18913181885787,13.5269475244259,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36777394539292,2.68120910214315,5.44454924306613,0,3.01353760869861,1.68471475667626,4.87773168890343,9.41865940848534,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84177952501695,2.00236175134926,0.17472666824203,0,0,0,0,1.74580229679155,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,3.0952078182318,0,3.68978156359193,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0.471878893390961,13.3902876920826,2.65709032145778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,3.72989095493466,2.3900586793153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,3.04803447055746,0.342233301085281,0.673520530145875,0.502055437748735,0.332660356546013,2.44209805832924,0,0,0,2.34640942403454,0,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.8072355126695,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,5.02478218224572,6.81865301477087,3.44165514466805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7192622725709,6.74410519545717,3.11639814476056,2.4998880192803,0,0,0,0,0,0,0,0,0,0,0,0,0,12.185398418281,9.23901705093727,4.53680311175637,3.94057499892532,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81215528727884,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01985876597321,2.60024098414608,0,0,0,0,0,0,0,0,0,5.61968712227326,5.18913181885787,13.5269475244259,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36777394539292,2.68120910214315,5.44454924306613,0,3.01353760869861,1.68471475667626,4.87773168890343,9.41865940848534,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84177952501695,2.00236175134926,0.17472666824203,0,0,0,0,1.74580229679155,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,3.0952078182318,0,3.68978156359193,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0.471878893390961,13.3902876920826,2.65709032145778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,3.72989095493466,2.3900586793153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,3.04803447055746,0.342233301085281,0.673520530145875,0.502055437748735,0.332660356546013,2.44209805832924,0,0,0,2.34640942403454,0,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p12@FRMD6 | |||
}} | }} |
Latest revision as of 04:47, 20 September 2015
Short description: | p12@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | 18bp_to_ENST00000356218, NM_001042481, uc001wzb.2_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | Q96NE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.40e-13 | 14 |