FFCP PHASE1:Hg19::chr3:126675978..126675988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84303 | |EntrezGene=84303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28184 | |HGNC=28184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_ENST00000510044_5end | |association_with_transcript=125bp_to_ENST00000510044_5end | ||
|cluster_id=chr3:126675978..126675988,+ | |||
|coexpression_cluster_id=C1500 | |||
|description=CAGE_peak_4_at_CHCHD6_5end | |description=CAGE_peak_4_at_CHCHD6_5end | ||
|id=chr3:126675978..126675988,+ | |id=chr3:126675978..126675988,+ | ||
|ontology_enrichment_celltype=CL:0000148!5.73e-29!10;CL:0000541!5.73e-29!10;CL:0002619!4.57e-25!3;CL:0000147!1.40e-20!14;CL:0002274!9.08e-15!5;CL:0000457!9.08e-15!5;CL:0002191!9.08e-15!5;CL:0000097!9.08e-15!5;CL:0000831!9.08e-15!5;CL:0002028!9.08e-15!5;CL:0000710!2.84e-14!20;CL:0000235!3.24e-13!10;CL:0002567!5.42e-12!3;CL:0000075!1.90e-10!27;CL:0000839!1.01e-09!70;CL:0000557!1.45e-09!71;CL:0002566!1.84e-09!1;CL:0000766!7.68e-09!76;CL:0002077!1.87e-08!33;CL:0000163!1.93e-08!9;CL:0000325!4.49e-07!39;CL:0000763!9.74e-07!112;CL:0000049!9.74e-07!112 | |ontology_enrichment_celltype=CL:0000148!5.73e-29!10;CL:0000541!5.73e-29!10;CL:0002619!4.57e-25!3;CL:0000147!1.40e-20!14;CL:0002274!9.08e-15!5;CL:0000457!9.08e-15!5;CL:0002191!9.08e-15!5;CL:0000097!9.08e-15!5;CL:0000831!9.08e-15!5;CL:0002028!9.08e-15!5;CL:0000710!2.84e-14!20;CL:0000235!3.24e-13!10;CL:0002567!5.42e-12!3;CL:0000075!1.90e-10!27;CL:0000839!1.01e-09!70;CL:0000557!1.45e-09!71;CL:0002566!1.84e-09!1;CL:0000766!7.68e-09!76;CL:0002077!1.87e-08!33;CL:0000163!1.93e-08!9;CL:0000325!4.49e-07!39;CL:0000763!9.74e-07!112;CL:0000049!9.74e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.04e-47;10!CL:0002619;3.58e-40;3!CL:0000147;1.43e-33;14!CL:0000710;1.85e-23;20!CL:0000235;1.13e-20;6!CL:0002567;1.09e-18;3!CL:0000075;2.51e-17;27!CL:0002566;2.25e-14;1!CL:0002077;9.84e-12;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.97e-47,10;CL:0000541,3.97e-47,10;CL:0002619,5.01e-40,3;CL:0000147,1.21e-33,14;CL:0000710,1.64e-23,20;CL:0000235,1.16e-20,6;CL:0002567,8.69e-19,3;CL:0000075,2.30e-17,27;CL:0002566,1.84e-14,1;CL:0002077,9.72e-14,34;CL:0000333,8.38e-11,41;CL:0002194,1.14e-07,59;CL:0000576,1.14e-07,59;CL:0000040,1.14e-07,59;CL:0000559,1.14e-07,59;CL:0000133,1.62e-07,59;CL:0002009,2.07e-07,61;CL:0000839,7.86e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.16e-17!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;7.60e-28;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.10e-28,2 | |||
|ontology_enrichment_uberon=UBERON:0007190!5.72e-09!1;UBERON:0002371!2.51e-08!80;UBERON:0001474!1.21e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@CHCHD6 | |short_description=p4@CHCHD6 | ||
}} | }} |
Latest revision as of 04:50, 20 September 2015
Short description: | p4@CHCHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHCHD6_5end |
Coexpression cluster: | C1500_Melanocyte_Monocytederived_CD14_melanoma_retina_Macrophage_Mast |
Association with transcript: | 125bp_to_ENST00000510044_5end |
EntrezGene: | CHCHD6 |
HGNC: | 28184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.97e-47 | 10 |
melanoblast | 3.97e-47 | 10 |
adult endothelial progenitor cell | 5.01e-40 | 3 |
pigment cell | 1.21e-33 | 14 |
neurecto-epithelial cell | 1.64e-23 | 20 |
macrophage | 1.16e-20 | 6 |
light melanocyte | 8.69e-19 | 3 |
columnar/cuboidal epithelial cell | 2.30e-17 | 27 |
dark melanocyte | 1.84e-14 | 1 |
ecto-epithelial cell | 9.72e-14 | 34 |
migratory neural crest cell | 8.38e-11 | 41 |
monopoietic cell | 1.14e-07 | 59 |
monocyte | 1.14e-07 | 59 |
monoblast | 1.14e-07 | 59 |
promonocyte | 1.14e-07 | 59 |
neurectodermal cell | 1.62e-07 | 59 |
macrophage dendritic cell progenitor | 2.07e-07 | 61 |
myeloid lineage restricted progenitor cell | 7.86e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.10e-28 | 2 |