FFCP PHASE1:Hg19::chr4:103748039..103748050,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9F6 | |||
|association_with_transcript=-15bp_to_ENST00000502563_5end | |||
|cluster_id=chr4:103748039..103748050,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_10_at_UBE2D3_5end | |||
|id=chr4:103748039..103748050,- | |||
|ontology_enrichment_celltype=CL:0002057!7.51e-22!42;CL:0000860!5.45e-18!45;CL:0000048!7.57e-14!430;CL:0000766!4.24e-13!76;CL:0000723!7.43e-13!436;CL:0002371!1.47e-12!591;CL:0000034!1.91e-12!444;CL:0000144!2.55e-11!625;CL:0002320!3.83e-10!365;CL:0002009!5.40e-10!65;CL:0002194!2.57e-09!63;CL:0000576!2.57e-09!63;CL:0000040!2.57e-09!63;CL:0000559!2.57e-09!63;CL:0000557!2.79e-09!71;CL:0000134!6.09e-09!358;CL:0000839!1.10e-08!70;CL:0000548!1.25e-07!679;CL:0000004!1.25e-07!679;CL:0000255!1.25e-07!679;CL:0000192!1.66e-07!42;CL:0000514!1.66e-07!42;CL:0000012!1.96e-07!682;CL:0000055!2.06e-07!180;CL:0000680!4.63e-07!57;CL:0000056!4.63e-07!57;CL:0000355!4.63e-07!57;CL:0000187!6.24e-07!54;CL:0000094!8.09e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.14e-19;33!CL:0002057;4.14e-19;33!CL:0000576;4.48e-12;48!CL:0000473;3.75e-11;39!CL:0000234;3.75e-11;39!CL:0000766;1.08e-08;69!CL:0000094;6.61e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.29e-22,42;CL:0002057,7.29e-22,42;CL:0000473,6.29e-16,48;CL:0000234,6.29e-16,48;CL:0000766,4.01e-15,72;CL:0000048,4.63e-15,427;CL:0000723,4.72e-14,433;CL:0000034,1.31e-13,441;CL:0002009,7.50e-12,61;CL:0002194,4.04e-11,59;CL:0000576,4.04e-11,59;CL:0000040,4.04e-11,59;CL:0000559,4.04e-11,59;CL:0000557,5.56e-11,67;CL:0002320,6.23e-11,361;CL:0000839,2.81e-10,66;CL:0000134,1.12e-09,354;CL:0000192,6.47e-08,43;CL:0000514,6.47e-08,43;CL:0000680,2.00e-07,58;CL:0000056,2.00e-07,58;CL:0000355,2.00e-07,58;CL:0000187,2.67e-07,55;CL:0000738,3.58e-07,136;CL:0000219,6.43e-07,386;CL:0000094,8.03e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.96e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.73e-15!167;UBERON:0002390!5.91e-12!102;UBERON:0003061!5.91e-12!102;UBERON:0002193!9.51e-11!112;UBERON:0002384!6.97e-10!375;UBERON:0000914!1.11e-08!83;UBERON:0002329!1.11e-08!83;UBERON:0003077!1.11e-08!83;UBERON:0003059!1.11e-08!83;UBERON:0007282!1.11e-08!83;UBERON:0009618!1.11e-08!83;UBERON:0007285!1.11e-08!83;UBERON:0000486!1.46e-08!82;UBERON:0002371!1.71e-08!80;UBERON:0000926!2.46e-08!448;UBERON:0004120!2.46e-08!448;UBERON:0006603!2.46e-08!448;UBERON:0004765!3.11e-08!101;UBERON:0001434!3.11e-08!101;UBERON:0004290!3.90e-08!70;UBERON:0001474!1.40e-07!86;UBERON:0003081!1.50e-07!216;UBERON:0002385!6.39e-07!63;UBERON:0001015!6.39e-07!63;UBERON:0000383!6.39e-07!63;UBERON:0001134!7.55e-07!61;UBERON:0002036!7.55e-07!61;UBERON:0003082!7.55e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.28e-18,167;UBERON:0000926,4.73e-16,315;UBERON:0004120,4.73e-16,315;UBERON:0006603,4.73e-16,315;UBERON:0002390,1.59e-13,98;UBERON:0003061,1.59e-13,98;UBERON:0002193,4.09e-12,108;UBERON:0002384,1.18e-10,371;UBERON:0001434,4.10e-10,100;UBERON:0002371,6.13e-10,76;UBERON:0004765,9.96e-10,90;UBERON:0003081,4.89e-09,203;UBERON:0000486,6.45e-09,83;UBERON:0001474,7.49e-09,82;UBERON:0002329,1.68e-08,71;UBERON:0003059,1.68e-08,71;UBERON:0007282,1.68e-08,71;UBERON:0004290,1.68e-08,71;UBERON:0009618,1.68e-08,71;UBERON:0007524,3.24e-08,73;UBERON:0002405,3.31e-08,93;UBERON:0003077,4.88e-08,72;UBERON:0007285,4.88e-08,72;UBERON:0002385,2.85e-07,64;UBERON:0001015,2.85e-07,64;UBERON:0000383,2.85e-07,64;UBERON:0001134,3.35e-07,62;UBERON:0002036,3.35e-07,62;UBERON:0003082,3.35e-07,62 | |||
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| |||
|short_description=p10@UBE2D3 | |||
}} |
Latest revision as of 04:55, 20 September 2015
Short description: | p10@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_UBE2D3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -15bp_to_ENST00000502563_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | D6R9F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.29e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.29e-22 | 42 |
defensive cell | 6.29e-16 | 48 |
phagocyte | 6.29e-16 | 48 |
myeloid leukocyte | 4.01e-15 | 72 |
multi fate stem cell | 4.63e-15 | 427 |
somatic stem cell | 4.72e-14 | 433 |
stem cell | 1.31e-13 | 441 |
macrophage dendritic cell progenitor | 7.50e-12 | 61 |
monopoietic cell | 4.04e-11 | 59 |
monocyte | 4.04e-11 | 59 |
monoblast | 4.04e-11 | 59 |
promonocyte | 4.04e-11 | 59 |
granulocyte monocyte progenitor cell | 5.56e-11 | 67 |
connective tissue cell | 6.23e-11 | 361 |
myeloid lineage restricted progenitor cell | 2.81e-10 | 66 |
mesenchymal cell | 1.12e-09 | 354 |
smooth muscle cell | 6.47e-08 | 43 |
smooth muscle myoblast | 6.47e-08 | 43 |
muscle precursor cell | 2.00e-07 | 58 |
myoblast | 2.00e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.00e-07 | 58 |
muscle cell | 2.67e-07 | 55 |
leukocyte | 3.58e-07 | 136 |
motile cell | 6.43e-07 | 386 |
granulocyte | 8.03e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.28e-18 | 167 |
mesoderm | 4.73e-16 | 315 |
mesoderm-derived structure | 4.73e-16 | 315 |
presumptive mesoderm | 4.73e-16 | 315 |
hematopoietic system | 1.59e-13 | 98 |
blood island | 1.59e-13 | 98 |
hemolymphoid system | 4.09e-12 | 108 |
connective tissue | 1.18e-10 | 371 |
skeletal system | 4.10e-10 | 100 |
bone marrow | 6.13e-10 | 76 |
skeletal element | 9.96e-10 | 90 |
lateral plate mesoderm | 4.89e-09 | 203 |
multilaminar epithelium | 6.45e-09 | 83 |
bone element | 7.49e-09 | 82 |
somite | 1.68e-08 | 71 |
presomitic mesoderm | 1.68e-08 | 71 |
presumptive segmental plate | 1.68e-08 | 71 |
dermomyotome | 1.68e-08 | 71 |
trunk paraxial mesoderm | 1.68e-08 | 71 |
dense mesenchyme tissue | 3.24e-08 | 73 |
immune system | 3.31e-08 | 93 |
paraxial mesoderm | 4.88e-08 | 72 |
presumptive paraxial mesoderm | 4.88e-08 | 72 |
muscle tissue | 2.85e-07 | 64 |
musculature | 2.85e-07 | 64 |
musculature of body | 2.85e-07 | 64 |
skeletal muscle tissue | 3.35e-07 | 62 |
striated muscle tissue | 3.35e-07 | 62 |
myotome | 3.35e-07 | 62 |