FFCP PHASE1:Hg19::chr19:58281014..58281074,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:58281014..58281074,+ to FFCP PHASE1:Hg19::chr19:58281014..58281074,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54807 | |EntrezGene=54807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25949 | |HGNC=25949 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCS0,G3XAH3,Q9NXT0,Q8N6X9,B3KTS9 | |UniProt=F8WCS0,G3XAH3,Q9NXT0,Q8N6X9,B3KTS9 | ||
|association_with_transcript=0bp_to_ENST00000308137,ENST00000391702,ENST00000396154,ENST00000430084,NM_001077426,NM_001204814,NM_017652,uc002qqd.2,uc002qqe.2,uc002qqf.1,uc010euh.2_5end | |||
|cluster_id=chr19:58281014..58281074,+ | |||
|description=CAGE_peak_1_at_ZNF586_5end | |||
|id=chr19:58281014..58281074,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.77e-25!172;CL:0000566!1.77e-25!172;CL:0002032!2.14e-22!165;CL:0000837!2.14e-22!165;CL:0000738!4.09e-22!140;CL:0000988!4.38e-21!182;CL:0002031!6.27e-17!124;CL:0002087!1.99e-16!119;CL:0000763!1.02e-12!112;CL:0000049!1.02e-12!112;CL:0000838!7.13e-10!52;CL:0000766!8.23e-10!76;CL:0000542!9.10e-10!53;CL:0000051!9.10e-10!53;CL:0002057!1.97e-08!42;CL:0000557!2.52e-08!71;CL:0000791!4.06e-08!18;CL:0000789!4.06e-08!18;CL:0002420!4.06e-08!18;CL:0002419!4.06e-08!18;CL:0000790!4.06e-08!18;CL:0000860!1.99e-07!45;CL:0000839!1.99e-07!70;CL:0000236!3.08e-07!14;CL:0002009!3.11e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.49e-08;18!CL:0000789;3.49e-08;18!CL:0002419;3.49e-08;18!CL:0000236;4.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.59e-27,168;CL:0002032,8.25e-24,161;CL:0000837,8.25e-24,161;CL:0000738,1.11e-23,136;CL:0000988,5.43e-23,177;CL:0002031,2.43e-18,120;CL:0002087,7.52e-18,115;CL:0000763,5.95e-14,108;CL:0000049,5.95e-14,108;CL:0000766,3.85e-11,72;CL:0000838,7.04e-10,52;CL:0000542,8.99e-10,53;CL:0000051,8.99e-10,53;CL:0000557,1.47e-09,67;CL:0000839,1.44e-08,66;CL:0000860,1.97e-08,42;CL:0002057,1.97e-08,42;CL:0002009,2.07e-08,61;CL:0000791,4.06e-08,18;CL:0000789,4.06e-08,18;CL:0002420,4.06e-08,18;CL:0002419,4.06e-08,18;CL:0000790,4.06e-08,18;CL:0002194,8.09e-08,59;CL:0000576,8.09e-08,59;CL:0000040,8.09e-08,59;CL:0000559,8.09e-08,59;CL:0000473,9.08e-08,48;CL:0000234,9.08e-08,48;CL:0000236,3.08e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;3.49e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.54e-27!115;UBERON:0001049!9.15e-15!57;UBERON:0005068!9.15e-15!57;UBERON:0006241!9.15e-15!57;UBERON:0007135!9.15e-15!57;UBERON:0003080!8.40e-13!42;UBERON:0002780!2.05e-12!41;UBERON:0001890!2.05e-12!41;UBERON:0006240!2.05e-12!41;UBERON:0002616!4.69e-11!59;UBERON:0001017!1.97e-10!82;UBERON:0002020!3.27e-10!34;UBERON:0003528!3.27e-10!34;UBERON:0002390!7.51e-10!102;UBERON:0003061!7.51e-10!102;UBERON:0005743!8.04e-10!86;UBERON:0001893!8.43e-10!34;UBERON:0002791!9.85e-10!33;UBERON:0001869!2.55e-09!32;UBERON:0000955!7.35e-09!69;UBERON:0006238!7.35e-09!69;UBERON:0000073!1.06e-08!94;UBERON:0001016!1.06e-08!94;UBERON:0002193!1.69e-08!112;UBERON:0002346!1.13e-07!90;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0002619!2.04e-07!22;UBERON:0000956!4.96e-07!25;UBERON:0000203!4.96e-07!25;UBERON:0001950!7.26e-07!20;UBERON:0002371!9.50e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.71e-09;41!UBERON:0001890;2.71e-09;41!UBERON:0003528;1.30e-08;34!UBERON:0002020;1.30e-08;34!UBERON:0002791;1.31e-08;32!UBERON:0001893;1.97e-08;34!UBERON:0001869;2.05e-08;32!UBERON:0000073;2.38e-08;53!UBERON:0002616;2.38e-08;53!UBERON:0007023;3.62e-08;114!UBERON:0002619;3.53e-07;22!UBERON:0000956;6.20e-07;25!UBERON:0000203;6.20e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-26,114;UBERON:0001049,2.22e-14,56;UBERON:0005068,2.22e-14,56;UBERON:0006241,2.22e-14,56;UBERON:0007135,2.22e-14,56;UBERON:0000073,2.60e-13,53;UBERON:0002616,2.60e-13,53;UBERON:0002780,2.05e-12,41;UBERON:0001890,2.05e-12,41;UBERON:0003080,2.05e-12,41;UBERON:0006240,2.05e-12,41;UBERON:0002390,6.10e-11,98;UBERON:0003061,6.10e-11,98;UBERON:0003528,3.27e-10,34;UBERON:0002020,3.27e-10,34;UBERON:0001017,4.10e-10,81;UBERON:0001893,8.42e-10,34;UBERON:0002791,1.30e-09,32;UBERON:0002193,2.00e-09,108;UBERON:0001869,2.55e-09,32;UBERON:0001016,6.50e-09,89;UBERON:0000955,1.50e-08,68;UBERON:0006238,1.50e-08,68;UBERON:0002346,6.27e-08,86;UBERON:0003075,9.92e-08,82;UBERON:0007284,9.92e-08,82;UBERON:0002371,1.02e-07,76;UBERON:0001474,1.87e-07,82;UBERON:0002619,2.04e-07,22;UBERON:0002405,3.69e-07,93;UBERON:0000956,4.96e-07,25;UBERON:0000203,4.96e-07,25;UBERON:0001950,7.26e-07,20;UBERON:0004765,8.23e-07,90 | |||
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| ||
|short_description=p1@ZNF586 | |||
}} | }} |
Latest revision as of 06:16, 20 September 2015
Short description: | p1@ZNF586 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF586_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308137, ENST00000391702, ENST00000396154, ENST00000430084, NM_001077426, NM_001204814, NM_017652, uc002qqd.2, uc002qqe.2, uc002qqf.1, uc010euh.2_5end |
EntrezGene: | ZNF586 |
HGNC: | 25949 |
UniProt: | F8WCS0G3XAH3Q9NXT0Q8N6X9B3KTS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-26 | 114 |
neural tube | 2.22e-14 | 56 |
neural rod | 2.22e-14 | 56 |
future spinal cord | 2.22e-14 | 56 |
neural keel | 2.22e-14 | 56 |
regional part of nervous system | 2.60e-13 | 53 |
regional part of brain | 2.60e-13 | 53 |
regional part of forebrain | 2.05e-12 | 41 |
forebrain | 2.05e-12 | 41 |
anterior neural tube | 2.05e-12 | 41 |
future forebrain | 2.05e-12 | 41 |
hematopoietic system | 6.10e-11 | 98 |
blood island | 6.10e-11 | 98 |
brain grey matter | 3.27e-10 | 34 |
gray matter | 3.27e-10 | 34 |
central nervous system | 4.10e-10 | 81 |
telencephalon | 8.42e-10 | 34 |
regional part of telencephalon | 1.30e-09 | 32 |
hemolymphoid system | 2.00e-09 | 108 |
cerebral hemisphere | 2.55e-09 | 32 |
nervous system | 6.50e-09 | 89 |
brain | 1.50e-08 | 68 |
future brain | 1.50e-08 | 68 |
neurectoderm | 6.27e-08 | 86 |
neural plate | 9.92e-08 | 82 |
presumptive neural plate | 9.92e-08 | 82 |
bone marrow | 1.02e-07 | 76 |
bone element | 1.87e-07 | 82 |
regional part of cerebral cortex | 2.04e-07 | 22 |
immune system | 3.69e-07 | 93 |
cerebral cortex | 4.96e-07 | 25 |
pallium | 4.96e-07 | 25 |
neocortex | 7.26e-07 | 20 |
skeletal element | 8.23e-07 | 90 |