FFCP PHASE1:Hg19::chr6:127839912..127839939,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387104 | |EntrezGene=387104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21494 | |HGNC=21494 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJP2 | |UniProt=E9PJP2 | ||
|association_with_transcript=96bp_to_ENST00000465909_5end | |association_with_transcript=96bp_to_ENST00000465909_5end | ||
|cluster_id=chr6:127839912..127839939,- | |||
|description=CAGE_peak_13_at_C6orf174_5end | |description=CAGE_peak_13_at_C6orf174_5end | ||
|id=chr6:127839912..127839939,- | |id=chr6:127839912..127839939,- | ||
|ontology_enrichment_celltype=CL:0000133!4.41e-15!59;CL:0002319!3.38e-12!25;CL:0000221!2.52e-11!71;CL:0000333!2.19e-09!41;CL:0000047!7.61e-09!8 | |ontology_enrichment_celltype=CL:0000133!4.41e-15!59;CL:0002319!3.38e-12!25;CL:0000221!2.52e-11!71;CL:0000333!2.19e-09!41;CL:0000047!7.61e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.86e-20;2!CL:0000333;7.88e-18;5!CL:0002319;2.87e-12;25!CL:0002553;1.15e-10;1!CL:0002566;1.15e-10;1!CL:0000540;3.10e-07;6!CL:0000404;3.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.76e-19,8;CL:0000133,4.41e-14,59;CL:0002319,2.70e-12,25;CL:0000221,2.37e-11,72;CL:0002553,9.05e-11,1;CL:0002566,1.61e-10,1;CL:0000333,1.48e-07,41;CL:0000540,2.78e-07,6;CL:0000031,2.78e-07,6;CL:0000404,2.78e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.19e-13;3!CL:0000133;2.94e-08;59!CL:0000031;3.10e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.83e-15;6!DOID:171;3.40e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.12e-15,6;DOID:171,3.50e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.39e-47!94;UBERON:0001016!7.39e-47!94;UBERON:0001017!1.64e-43!82;UBERON:0005743!8.47e-41!86;UBERON:0001049!2.02e-37!57;UBERON:0005068!2.02e-37!57;UBERON:0006241!2.02e-37!57;UBERON:0007135!2.02e-37!57;UBERON:0000955!8.16e-32!69;UBERON:0006238!8.16e-32!69;UBERON:0002616!1.69e-31!59;UBERON:0003075!2.07e-28!86;UBERON:0007284!2.07e-28!86;UBERON:0002346!5.24e-28!90;UBERON:0000924!1.21e-27!173;UBERON:0006601!1.21e-27!173;UBERON:0004121!1.31e-27!169;UBERON:0002020!7.40e-26!34;UBERON:0003528!7.40e-26!34;UBERON:0001893!1.50e-25!34;UBERON:0001869!2.80e-25!32;UBERON:0002791!4.13e-24!33;UBERON:0002780!4.75e-24!41;UBERON:0001890!4.75e-24!41;UBERON:0006240!4.75e-24!41;UBERON:0003080!2.69e-23!42;UBERON:0000956!3.25e-23!25;UBERON:0000203!3.25e-23!25;UBERON:0001950!1.17e-21!20;UBERON:0002619!1.28e-21!22;UBERON:0000033!1.26e-19!123;UBERON:0003056!1.92e-19!61;UBERON:0000153!4.23e-18!129;UBERON:0007811!4.23e-18!129;UBERON:0003076!8.69e-16!15;UBERON:0003057!8.69e-16!15;UBERON:0007023!1.49e-11!115;UBERON:0004733!1.94e-11!12;UBERON:0002028!1.94e-11!12;UBERON:0007277!1.94e-11!12;UBERON:0000200!2.47e-11!6;UBERON:0004732!2.14e-10!13;UBERON:0000064!1.90e-08!219;UBERON:0000025!3.36e-08!194;UBERON:0002298!5.09e-08!8;UBERON:0001871!6.58e-08!7;UBERON:0000119!7.31e-08!312;UBERON:0002680!2.47e-07!9;UBERON:0001895!2.47e-07!9;UBERON:0010092!2.47e-07!9;UBERON:0000475!3.47e-07!365;UBERON:0000483!3.71e-07!309;UBERON:0000010!5.48e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.88e-18;5!UBERON:0002410;7.88e-18;5!UBERON:0000010;3.69e-10;8!UBERON:0001950;1.40e-07;20!UBERON:0001016;1.55e-07;83!UBERON:0002037;3.92e-07;6!UBERON:0002619;6.24e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.25e-18,89;UBERON:0000013,8.35e-18,5;UBERON:0002410,8.35e-18,5;UBERON:0001017,3.62e-12,81;UBERON:0000010,3.81e-10,8;UBERON:0004121,6.73e-10,171;UBERON:0000924,6.73e-10,171;UBERON:0006601,6.73e-10,171;UBERON:0011216,1.73e-09,223;UBERON:0001950,1.38e-07,20;UBERON:0002037,4.17e-07,6;UBERON:0006215,4.17e-07,6;UBERON:0002619,6.15e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946420296687,0.763976851116555,0,0,0,0.300343057843917,0.571652865261156,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,1.30139853857622,0,1.67516265334349,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,1.03423011972439,0,0.520874984799877,0,0.120596438625408,1.52581736317083,1.10579259931225,0.295547618953547,0.219385397153973,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,0.741383633679017,0.626531697032732,0.202203398942031,0,0.468528891450678,0,0,0,0,0,3.97894590119637,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0.400794101257669,0,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.550157746388935,0.415440338029185,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,1.3771002377715,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0,0,0,0.936669811613763,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,3.32525365389494,2.372145850727,0.157265941855896,1.52893493468819,0,0,0,0,0,0,1.60114149657094,0,0,0.256916900385838,0,0.159633859057151,0.82046545696302,3.78107544332577,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.19024743058172,3.82882366312754,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0,0.40781839786099,0.460409414939944,0,0,0,0,0,0.913158720509496,0,0,0,2.84424501118908,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.109940516745429,5.28369952483357,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,4.36350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946420296687,0.763976851116555,0,0,0,0.300343057843917,0.571652865261156,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,1.30139853857622,0,1.67516265334349,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,1.03423011972439,0,0.520874984799877,0,0.120596438625408,1.52581736317083,1.10579259931225,0.295547618953547,0.219385397153973,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,0.741383633679017,0.626531697032732,0.202203398942031,0,0.468528891450678,0,0,0,0,0,3.97894590119637,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0.400794101257669,0,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.550157746388935,0.415440338029185,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,1.3771002377715,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0,0,0,0.936669811613763,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,3.32525365389494,2.372145850727,0.157265941855896,1.52893493468819,0,0,0,0,0,0,1.60114149657094,0,0,0.256916900385838,0,0.159633859057151,0.82046545696302,3.78107544332577,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.19024743058172,3.82882366312754,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0,0.40781839786099,0.460409414939944,0,0,0,0,0,0.913158720509496,0,0,0,2.84424501118908,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.109940516745429,5.28369952483357,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,4.36350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@C6orf174 | |short_description=p13@C6orf174 | ||
}} | }} |
Latest revision as of 15:07, 24 September 2015
Short description: | p13@C6orf174 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_C6orf174_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000465909_5end |
EntrezGene: | C6orf174 |
HGNC: | 21494 |
UniProt: | E9PJP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.76e-19 | 8 |
neurectodermal cell | 4.41e-14 | 59 |
neural cell | 2.70e-12 | 25 |
ectodermal cell | 2.37e-11 | 72 |
lung fibroblast | 9.05e-11 | 1 |
dark melanocyte | 1.61e-10 | 1 |
migratory neural crest cell | 1.48e-07 | 41 |
neuron | 2.78e-07 | 6 |
neuroblast | 2.78e-07 | 6 |
electrically signaling cell | 2.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.25e-18 | 89 |
sympathetic nervous system | 8.35e-18 | 5 |
autonomic nervous system | 8.35e-18 | 5 |
central nervous system | 3.62e-12 | 81 |
peripheral nervous system | 3.81e-10 | 8 |
ectoderm-derived structure | 6.73e-10 | 171 |
ectoderm | 6.73e-10 | 171 |
presumptive ectoderm | 6.73e-10 | 171 |
organ system subdivision | 1.73e-09 | 223 |
neocortex | 1.38e-07 | 20 |
cerebellum | 4.17e-07 | 6 |
rhombic lip | 4.17e-07 | 6 |
regional part of cerebral cortex | 6.15e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.12e-15 | 6 |
neuroectodermal tumor | 3.50e-09 | 10 |