FFCP PHASE1:Hg19::chr12:71148357..71148369,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5801 | |EntrezGene=5801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9680 | |HGNC=9680 | ||
|TSSclassifier=strong | |||
|UniProt=Q15256 | |UniProt=Q15256 | ||
|association_with_transcript=0bp_to_uc001swh.1_5end | |association_with_transcript=0bp_to_uc001swh.1_5end | ||
|cluster_id=chr12:71148357..71148369,- | |||
|coexpression_cluster_id=C1684 | |coexpression_cluster_id=C1684 | ||
|description=CAGE_peak_7_at_PTPRR_5end | |description=CAGE_peak_7_at_PTPRR_5end | ||
|id=chr12:71148357..71148369,- | |id=chr12:71148357..71148369,- | ||
|ontology_enrichment_celltype=CL:0002541;1.86e-21;3!CL:1000415;3.57e-09;2 | |ontology_enrichment_celltype=CL:0002541!6.10e-12!3;CL:0000159!3.80e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;1.86e-21;3!CL:1000415;3.57e-09;2 | ||
|ontology_enrichment_disease=DOID:3111;2.08e-16;1!DOID:3603;2.08e-16;1 | |ontology_enrichment_celltype_v019_2=CL:0002541,1.96e-21,3;CL:1000415,3.71e-09,2 | ||
|ontology_enrichment_uberon=UBERON:0003124;1.86e-21;3!UBERON:0000920;1.86e-21;3!UBERON:0000160;6.18e-14;17!UBERON:0005409;5.66e-11;22!UBERON:0005631;4.32e-07;10!UBERON:0000158;4.32e-07;10!UBERON:0004921;6.55e-07;33 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.83e-08!106;DOID:299!7.54e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.08e-16;1!DOID:3603;2.08e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.63e-16,1;DOID:3603,2.63e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.17e-13!12;UBERON:0007023!3.18e-13!115;UBERON:0000476!6.10e-12!3;UBERON:0000920!6.10e-12!3;UBERON:0005409!8.21e-12!35;UBERON:0000160!5.28e-11!27;UBERON:0003124!1.05e-08!7;UBERON:0001007!1.25e-08!155;UBERON:0001555!1.25e-08!155;UBERON:0007026!1.25e-08!155;UBERON:0004119!2.92e-08!169;UBERON:0000925!2.92e-08!169;UBERON:0006595!2.92e-08!169;UBERON:0000059!3.16e-08!11;UBERON:0001255!3.66e-08!2;UBERON:0001556!3.66e-08!2;UBERON:0001046!4.63e-08!19;UBERON:0004921!1.29e-07!129;UBERON:0004185!1.29e-07!129;UBERON:0003350!4.15e-07!5;UBERON:0001049!8.32e-07!57;UBERON:0005068!8.32e-07!57;UBERON:0006241!8.32e-07!57;UBERON:0007135!8.32e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.86e-21;3!UBERON:0000920;1.86e-21;3!UBERON:0000160;6.18e-14;17!UBERON:0005409;5.66e-11;22!UBERON:0005631;4.32e-07;10!UBERON:0000158;4.32e-07;10!UBERON:0004921;6.55e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.96e-21,3;UBERON:0000160,5.50e-14,17;UBERON:0005409,8.96e-10,25;UBERON:0003124,9.52e-10,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0,0,0,0,0,0,2.23300811812344,0.641183153813036,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0.995261931078505,0.707660516026713,8.55442202907076,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,16.0352133842538,0,0.213452994739353,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,1.41696576325585,0,0,0,0.138314504928436,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0,0.79832133146375,0.230467975111559,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,16.8163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9971296901144,0,0,0.671132590786754,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,1.389134845943,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0,0.89543595472072,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0,0,0,0,0,0,2.23300811812344,0.641183153813036,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0.995261931078505,0.707660516026713,8.55442202907076,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,16.0352133842538,0,0.213452994739353,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,1.41696576325585,0,0,0,0.138314504928436,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0,0.79832133146375,0.230467975111559,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,16.8163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9971296901144,0,0,0.671132590786754,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,1.389134845943,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0,0.89543595472072,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p7@PTPRR | |short_description=p7@PTPRR | ||
}} | }} |
Latest revision as of 16:16, 24 September 2015
Short description: | p7@PTPRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTPRR_5end |
Coexpression cluster: | C1684_serous_gall_rectal_colon_chorionic_adult_non |
Association with transcript: | 0bp_to_uc001swh.1_5end |
EntrezGene: | PTPRR |
HGNC: | 9680 |
UniProt: | Q15256 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.96e-21 | 3 |
epithelial cell of gall bladder | 3.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.96e-21 | 3 |
intestine | 5.50e-14 | 17 |
gastrointestinal system | 8.96e-10 | 25 |
chorion | 9.52e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.63e-16 | 1 |
mucinous cystadenocarcinoma | 2.63e-16 | 1 |