FFCP PHASE1:Hg19::chr17:41738684..41738704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4222 | |EntrezGene=4222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7013 | |HGNC=7013 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_AB527749,CU686836,EU446636_5end | |association_with_transcript=197bp_to_AB527749,CU686836,EU446636_5end | ||
|cluster_id=chr17:41738684..41738704,- | |||
|coexpression_cluster_id=C3636 | |||
|description=CAGE_peak_2_at_MEOX1_5end | |description=CAGE_peak_2_at_MEOX1_5end | ||
|id=chr17:41738684..41738704,- | |id=chr17:41738684..41738704,- | ||
|ontology_enrichment_celltype=CL:0000791!1.85e-20!18;CL:0000789!1.85e-20!18;CL:0002420!1.85e-20!18;CL:0002419!1.85e-20!18;CL:0000790!1.85e-20!18;CL:0000084!2.11e-15!25;CL:0000827!2.11e-15!25;CL:0000625!3.08e-13!11;CL:0000838!3.45e-11!52;CL:0000542!7.44e-11!53;CL:0000051!7.44e-11!53;CL:0000624!1.80e-10!6 | |ontology_enrichment_celltype=CL:0000791!1.85e-20!18;CL:0000789!1.85e-20!18;CL:0002420!1.85e-20!18;CL:0002419!1.85e-20!18;CL:0000790!1.85e-20!18;CL:0000084!2.11e-15!25;CL:0000827!2.11e-15!25;CL:0000625!3.08e-13!11;CL:0000838!3.45e-11!52;CL:0000542!7.44e-11!53;CL:0000051!7.44e-11!53;CL:0000624!1.80e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.08e-15;18!CL:0000789;7.08e-15;18!CL:0002419;7.08e-15;18!CL:0000084;2.73e-12;25!CL:0000625;3.41e-09;11!CL:0000624;1.63e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.63e-15,18;CL:0000789,4.63e-15,18;CL:0002420,4.63e-15,18;CL:0002419,4.63e-15,18;CL:0000790,4.63e-15,18;CL:0000084,1.96e-12,25;CL:0000827,1.96e-12,25;CL:0000625,2.31e-09,11;CL:0000624,1.57e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;7.08e-15;18!UBERON:0005062;3.15e-08;4!UBERON:0007284;3.15e-08;4!UBERON:0004872;2.18e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.32e-24!115;UBERON:0003978!8.69e-07!3;UBERON:0009751!8.69e-07!3;UBERON:0000946!8.69e-07!3;UBERON:0002523!8.69e-07!3;UBERON:0005983!8.69e-07!3;UBERON:0002165!8.69e-07!3;UBERON:0002062!8.69e-07!3;UBERON:0007280!8.69e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.32e-24!115;UBERON:0003978!8.69e-07!3;UBERON:0009751!8.69e-07!3;UBERON:0000946!8.69e-07!3;UBERON:0002523!8.69e-07!3;UBERON:0005983!8.69e-07!3;UBERON:0002165!8.69e-07!3;UBERON:0002062!8.69e-07!3;UBERON:0007280!8.69e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.36e-11;3!UBERON:0000946;7.36e-11;3!UBERON:0002081;9.53e-08;2!UBERON:0002133;9.53e-08;2!UBERON:0003127;3.24e-07;2!UBERON:0005090;9.01e-07;2!UBERON:0001829;9.01e-07;2!UBERON:0001630;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.52e-22,114;UBERON:0003978,7.79e-11,3;UBERON:0009751,7.79e-11,3;UBERON:0000946,7.79e-11,3;UBERON:0002523,7.79e-11,3;UBERON:0005983,7.79e-11,3;UBERON:0002165,7.79e-11,3;UBERON:0002062,7.79e-11,3;UBERON:0007280,7.79e-11,3;UBERON:0002133,9.58e-08,2;UBERON:0002081,1.06e-07,2;UBERON:0010227,1.06e-07,2;UBERON:0003127,2.50e-07,2;UBERON:0005090,9.05e-07,2;UBERON:0001630,9.05e-07,2;UBERON:0001829,9.61e-07,2 | |||
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| ||
|short_description=p2@MEOX1 | |short_description=p2@MEOX1 | ||
}} | }} |
Latest revision as of 18:35, 24 September 2015
Short description: | p2@MEOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEOX1_5end |
Coexpression cluster: | C3636_CD4_heart_vagina_vein_lymphangiectasia_adipose_breast |
Association with transcript: | 197bp_to_AB527749, CU686836, EU446636_5end |
EntrezGene: | MEOX1 |
HGNC: | 7013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.63e-15 | 18 |
alpha-beta T cell | 4.63e-15 | 18 |
immature T cell | 4.63e-15 | 18 |
mature T cell | 4.63e-15 | 18 |
immature alpha-beta T cell | 4.63e-15 | 18 |
T cell | 1.96e-12 | 25 |
pro-T cell | 1.96e-12 | 25 |
CD8-positive, alpha-beta T cell | 2.31e-09 | 11 |
CD4-positive, alpha-beta T cell | 1.57e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.52e-22 | 114 |
valve | 7.79e-11 | 3 |
cardiac mesenchyme | 7.79e-11 | 3 |
cardial valve | 7.79e-11 | 3 |
tunica intima | 7.79e-11 | 3 |
heart layer | 7.79e-11 | 3 |
endocardium | 7.79e-11 | 3 |
endocardial cushion | 7.79e-11 | 3 |
presumptive endocardium | 7.79e-11 | 3 |
atrioventricular valve | 9.58e-08 | 2 |
cardiac atrium | 1.06e-07 | 2 |
future cardiac atrium | 1.06e-07 | 2 |
open tracheal system trachea | 2.50e-07 | 2 |
muscle structure | 9.05e-07 | 2 |
muscle organ | 9.05e-07 | 2 |
major salivary gland | 9.61e-07 | 2 |