FFCP PHASE1:Hg19::chr2:219646891..219646911,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1593 | |EntrezGene=1593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2605 | |HGNC=2605 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466602_5end | |association_with_transcript=0bp_to_ENST00000466602_5end | ||
|cluster_id=chr2:219646891..219646911,+ | |||
|coexpression_cluster_id=C848 | |||
|description=CAGE_peak_3_at_CYP27A1_5end | |description=CAGE_peak_3_at_CYP27A1_5end | ||
|id=chr2:219646891..219646911,+ | |id=chr2:219646891..219646911,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.81e-26!76;CL:0002194!3.13e-24!63;CL:0000576!3.13e-24!63;CL:0000040!3.13e-24!63;CL:0000559!3.13e-24!63;CL:0002009!1.39e-22!65;CL:0002057!3.35e-22!42;CL:0000839!1.44e-20!70;CL:0000557!7.09e-20!71;CL:0000860!3.26e-19!45;CL:0000763!5.44e-11!112;CL:0000049!5.44e-11!112;CL:0000738!5.73e-07!140 | |ontology_enrichment_celltype=CL:0000766!2.81e-26!76;CL:0002194!3.13e-24!63;CL:0000576!3.13e-24!63;CL:0000040!3.13e-24!63;CL:0000559!3.13e-24!63;CL:0002009!1.39e-22!65;CL:0002057!3.35e-22!42;CL:0000839!1.44e-20!70;CL:0000557!7.09e-20!71;CL:0000860!3.26e-19!45;CL:0000763!5.44e-11!112;CL:0000049!5.44e-11!112;CL:0000738!5.73e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;5.39e-29;39!CL:0000234;5.39e-29;39!CL:0000860;4.09e-28;33!CL:0002057;4.09e-28;33!CL:0000576;1.38e-20;48!CL:0000766;6.91e-16;69!CL:0000235;4.94e-08;6!CL:1000507;1.26e-07;10!CL:1000494;1.26e-07;10!CL:0000094;1.66e-07;8!CL:0000763;9.37e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.50e-38,72;CL:0000473,3.85e-37,48;CL:0000234,3.85e-37,48;CL:0002194,9.16e-37,59;CL:0000576,9.16e-37,59;CL:0000040,9.16e-37,59;CL:0000559,9.16e-37,59;CL:0002009,7.32e-35,61;CL:0000860,1.17e-30,42;CL:0002057,1.17e-30,42;CL:0000839,1.25e-30,66;CL:0000557,7.32e-30,67;CL:0000763,4.91e-21,108;CL:0000049,4.91e-21,108;CL:0000738,1.56e-14,136;CL:0002087,7.64e-12,115;CL:0002031,4.04e-09,120;CL:0000235,5.01e-08,6;CL:0000037,5.05e-08,168;CL:0000988,6.10e-08,177;CL:0002032,6.35e-08,161;CL:0000837,6.35e-08,161;CL:1000507,1.31e-07,10;CL:1000494,1.31e-07,10;CL:0000094,2.15e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-22;42!CL:0000049;4.30e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.33e-22!115;UBERON:0002390!3.79e-18!102;UBERON:0003061!3.79e-18!102;UBERON:0002371!1.70e-17!80;UBERON:0002405!4.34e-17!115;UBERON:0002193!7.90e-16!112;UBERON:0001474!5.71e-15!86;UBERON:0004765!5.13e-14!101;UBERON:0001434!5.13e-14!101;UBERON:0000062!9.79e-13!511;UBERON:0000922!1.93e-10!612;UBERON:0002204!1.96e-10!167;UBERON:0002050!6.67e-10!605;UBERON:0005423!6.67e-10!605;UBERON:0000923!8.48e-10!604;UBERON:0005291!8.48e-10!604;UBERON:0006598!8.48e-10!604;UBERON:0002532!8.48e-10!604;UBERON:0003081!4.83e-09!216;UBERON:0000468!7.01e-09!659;UBERON:0000467!2.27e-08!625;UBERON:0000480!3.22e-08!626;UBERON:0000926!5.54e-08!448;UBERON:0004120!5.54e-08!448;UBERON:0006603!5.54e-08!448;UBERON:0000080!5.99e-07!18;UBERON:0002120!5.99e-07!18;UBERON:0004875!5.99e-07!18;UBERON:0005721!5.99e-07!18;UBERON:0005754!5.99e-07!18;UBERON:0007297!5.99e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.26e-07;10!UBERON:0009773;1.26e-07;10!UBERON:0001231;1.26e-07;10!UBERON:0004810;1.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.38e-26,98;UBERON:0003061,2.38e-26,98;UBERON:0002371,7.13e-26,76;UBERON:0002193,2.29e-24,108;UBERON:0001474,1.75e-22,82;UBERON:0002405,1.17e-21,93;UBERON:0004765,1.89e-19,90;UBERON:0001434,1.97e-16,100;UBERON:0007023,1.35e-15,114;UBERON:0002204,9.60e-12,167;UBERON:0003081,8.08e-11,203;UBERON:0005423,8.52e-09,581;UBERON:0000922,3.85e-08,592;UBERON:0000926,4.78e-08,315;UBERON:0004120,4.78e-08,315;UBERON:0006603,4.78e-08,315;UBERON:0004810,1.31e-07,10;UBERON:0005172,6.20e-07,54;UBERON:0005173,6.20e-07,54;UBERON:0000923,9.68e-07,560;UBERON:0010316,9.68e-07,560;UBERON:0005291,9.68e-07,560;UBERON:0006598,9.68e-07,560;UBERON:0010317,9.68e-07,560;UBERON:0002532,9.68e-07,560 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,2.00146596706261,0,0,0,0.631719873426831,0.261185628199839,0.737201809504527,2.79120467188971,0,0,0.618831764800233,0.331397375727916,3.36162573225888,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,9.04737836752479,1.15148819429164,6.34746105595912,0,0,0,0,0,0,7.75593571944628,5.81578897663411,7.37836960433896,100.090216985246,221.219373890963,89.1211464014285,24.4269041149669,30.6079514387936,27.1694148530354,27.6590553917765,29.1929200495496,25.3959224133985,17.8369283239733,11.0149103807513,15.371344942758,25.1664346937732,7.74581620300591,6.77132432971709,25.224473498709,37.9339548580406,39.1018862934447,15.610278510916,14.4418062184242,16.6227652707751,23.7492936134436,13.1646014030277,20.4587880255693,15.0908804086864,6.80862269629368,13.0792672289071,19.8486445552827,8.34372669472322,20.415751402281,24.2159801053348,6.99727508376373,21.2029799585393,1.26753171787165,3.4016687994407,3.98351426465914,13.1424498441399,18.1714040338223,14.1438516293431,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.383959833463255,1.24930726552346,0.473554504088034,0.821127996921047,0,0,0,2.43806866313962,5.36560687762909,0,0.361439152384566,0,1.30361867064741,1.5905718941022,4.37971383272372,0.189069634328136,0,0.43917392846563,9.36500389808645,0.364295288292542,0,20.1219384065904,17.587103467226,31.6439946034899,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,13.1780417436063,23.2668158488995,0,0,0,0,0,1.77334191099179,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,0,1.23633464639278,0,1.43723628363248,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0,0,0,0.184099797284599,0.323292113637624,0,0,0.339121184620975,0.386521706326594,0,0,0.121973706129595,0,0.464775771478074,0.310983165046111,0.504641701751257,0,4.69348596989448,1.28648187638577,0,4.64367928031979,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,152.106041786197,88.4544495009863,210.911996685261,0,2.09080345523293,0,0,0,0,0.0925884451585296,0,0,0,0.579652024875384,0,0,0,0,0,0,53.6753073270526,217.85797084463,119.350823317849,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,6.92127047784643,6.875791660049,30.4765362746122,15.3965201420435,3.70178973731965,9.31063479316144,15.4346273620512,0.112131084345361,0.43596006883328,0,0.258543431515556,3.57656445851882,0,0,0,0.514414748524284,2.83698264046557,0,0.285955987316295,0.542621605391443,2.46972101034231,0,0,0.791951872933429,0.602878754119172,0.871533458600294,0.499864955910285,474.332744500643,205.925407487172,347.876000147002,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,17.9761685747324,14.9580729602012,9.11714129559278,1.2269149171914,0.500170521059677,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,1.50473049863859,6.82222512167955,0,0,0.184369168541703,0.434418072340414,0.783204629850962,1.71571711905428,3.10152039184331,2.5885704098234,1.06727557803444,0.303127571446259,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0.116210378459959,0.604297247958111,0,0,0,2.00300284807389,4.19598127870157,4.06079651616671,3.92778219232515,11.7652465376528,18.9980992049239,5.17202981575091,0,0.340187410553031,0.863663664408557,3.08454505380579,3.25135725052623,6.02027728625824,3.3133915495855,3.3243040357149,1.56712328305525,0,0,6.15480300279334,2.29610251989794,8.13445986660758,83.5662604463028,0,0,0,0,0,1.06337790121334,0.154048617114644,0.307007349452259,0.137836572484531,1.50388342815583,1.74020032697074,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0,2.2875623270859,1.02359116524534,2.99557291623744,0,0,1.61885211824983,1.09814811894422,0.353437207037059,0.202182481573316,0,0,1.46290121726877,0.243713489631284,0,0.409499734223957,0,0,0,0,0.876901770507525,1.15755106853338,1.31178950409327,0.202910376962704,0.92947049429925,0,0,0.0982490410131212,0,0.354761064070598,5.06658324714394,0.987884678879706,0.379473173765715,1.74967360122491,0,0.670302275535787,0,85.8591463084226,0,0,0.443430153536676,0,5.58192370155386,6.117097657139,6.26611905891579,0.714695326373367,1.23408681925858,7.13320642311989,3.24018862342869,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,13.0392279551986,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,1.26602474769461,0.111308705022906,0,0,6.97367958878744,1.93398740871803,1.76352923497993,0.409074730008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| ||
|short_description=p3@CYP27A1 | |short_description=p3@CYP27A1 | ||
}} | }} |
Latest revision as of 18:38, 24 September 2015
Short description: | p3@CYP27A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP27A1_5end |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | 0bp_to_ENST00000466602_5end |
EntrezGene: | CYP27A1 |
HGNC: | 2605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.50e-38 | 72 |
defensive cell | 3.85e-37 | 48 |
phagocyte | 3.85e-37 | 48 |
monopoietic cell | 9.16e-37 | 59 |
monocyte | 9.16e-37 | 59 |
monoblast | 9.16e-37 | 59 |
promonocyte | 9.16e-37 | 59 |
macrophage dendritic cell progenitor | 7.32e-35 | 61 |
classical monocyte | 1.17e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-30 | 42 |
myeloid lineage restricted progenitor cell | 1.25e-30 | 66 |
granulocyte monocyte progenitor cell | 7.32e-30 | 67 |
myeloid cell | 4.91e-21 | 108 |
common myeloid progenitor | 4.91e-21 | 108 |
leukocyte | 1.56e-14 | 136 |
nongranular leukocyte | 7.64e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.04e-09 | 120 |
macrophage | 5.01e-08 | 6 |
hematopoietic stem cell | 5.05e-08 | 168 |
hematopoietic cell | 6.10e-08 | 177 |
hematopoietic oligopotent progenitor cell | 6.35e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.35e-08 | 161 |
kidney tubule cell | 1.31e-07 | 10 |
nephron tubule epithelial cell | 1.31e-07 | 10 |
granulocyte | 2.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.38e-26 | 98 |
blood island | 2.38e-26 | 98 |
bone marrow | 7.13e-26 | 76 |
hemolymphoid system | 2.29e-24 | 108 |
bone element | 1.75e-22 | 82 |
immune system | 1.17e-21 | 93 |
skeletal element | 1.89e-19 | 90 |
skeletal system | 1.97e-16 | 100 |
adult organism | 1.35e-15 | 114 |
musculoskeletal system | 9.60e-12 | 167 |
lateral plate mesoderm | 8.08e-11 | 203 |
developing anatomical structure | 8.52e-09 | 581 |
embryo | 3.85e-08 | 592 |
mesoderm | 4.78e-08 | 315 |
mesoderm-derived structure | 4.78e-08 | 315 |
presumptive mesoderm | 4.78e-08 | 315 |
nephron tubule epithelium | 1.31e-07 | 10 |
abdomen element | 6.20e-07 | 54 |
abdominal segment element | 6.20e-07 | 54 |
germ layer | 9.68e-07 | 560 |
germ layer / neural crest | 9.68e-07 | 560 |
embryonic tissue | 9.68e-07 | 560 |
presumptive structure | 9.68e-07 | 560 |
germ layer / neural crest derived structure | 9.68e-07 | 560 |
epiblast (generic) | 9.68e-07 | 560 |