FFCP PHASE1:Hg19::chr6:132269939..132269966,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=420bp_to_AF127918_5end | |association_with_transcript=420bp_to_AF127918_5end | ||
|cluster_id=chr6:132269939..132269966,- | |||
|coexpression_cluster_id=C506 | |coexpression_cluster_id=C506 | ||
|description=CAGE_peak_12_at_CTGF_5end | |description=CAGE_peak_12_at_CTGF_5end | ||
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|ontology_enrichment_celltype=CL:0000055!6.13e-16!180;CL:0000222!1.20e-12!119;CL:0000057!5.48e-12!75;CL:0002139!9.37e-11!24;CL:0002078!6.55e-10!44;CL:0000071!1.20e-08!18;CL:0002546!1.20e-08!18;CL:0000192!3.72e-08!42;CL:0000514!3.72e-08!42;CL:0000115!9.79e-08!35;CL:0000220!1.01e-07!246;CL:0002321!1.93e-07!248;CL:0000359!2.79e-07!32;CL:0000213!8.35e-07!57;CL:0000215!8.35e-07!57 | |ontology_enrichment_celltype=CL:0000055!6.13e-16!180;CL:0000222!1.20e-12!119;CL:0000057!5.48e-12!75;CL:0002139!9.37e-11!24;CL:0002078!6.55e-10!44;CL:0000071!1.20e-08!18;CL:0002546!1.20e-08!18;CL:0000192!3.72e-08!42;CL:0000514!3.72e-08!42;CL:0000115!9.79e-08!35;CL:0000220!1.01e-07!246;CL:0002321!1.93e-07!248;CL:0000359!2.79e-07!32;CL:0000213!8.35e-07!57;CL:0000215!8.35e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002579;5.17e-07;3!CL:0000135;6.59e-07;3!CL:0000388;6.59e-07;3 | |ontology_enrichment_celltype_v019=CL:0002579;5.17e-07;3!CL:0000135;6.59e-07;3!CL:0000388;6.59e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.89e-11,76;CL:0002579,4.32e-07,3;CL:0000135,9.67e-07,3;CL:0000388,9.67e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.49e-19!79;UBERON:0007798!1.49e-19!79;UBERON:0003914!6.00e-18!118;UBERON:0000055!9.66e-18!69;UBERON:0001981!3.33e-16!60;UBERON:0007500!3.33e-16!60;UBERON:0004537!3.33e-16!60;UBERON:0006965!3.33e-16!60;UBERON:0004872!1.90e-15!84;UBERON:0001009!1.51e-14!113;UBERON:0004535!2.53e-14!110;UBERON:0001637!9.33e-13!42;UBERON:0003509!9.33e-13!42;UBERON:0004572!9.33e-13!42;UBERON:0000490!1.05e-09!138;UBERON:0004573!1.11e-09!33;UBERON:0004571!1.11e-09!33;UBERON:0006914!8.83e-09!25;UBERON:0001986!1.20e-08!18;UBERON:0004638!1.20e-08!18;UBERON:0004852!1.20e-08!18;UBERON:0000487!1.34e-08!22;UBERON:0009569!4.57e-08!113;UBERON:0002100!7.30e-08!216;UBERON:0000477!1.17e-07!286;UBERON:0005256!1.29e-07!143;UBERON:0004111!3.18e-07!241;UBERON:0000947!6.93e-07!21;UBERON:0010191!6.93e-07!21 | |ontology_enrichment_uberon=UBERON:0002049!1.49e-19!79;UBERON:0007798!1.49e-19!79;UBERON:0003914!6.00e-18!118;UBERON:0000055!9.66e-18!69;UBERON:0001981!3.33e-16!60;UBERON:0007500!3.33e-16!60;UBERON:0004537!3.33e-16!60;UBERON:0006965!3.33e-16!60;UBERON:0004872!1.90e-15!84;UBERON:0001009!1.51e-14!113;UBERON:0004535!2.53e-14!110;UBERON:0001637!9.33e-13!42;UBERON:0003509!9.33e-13!42;UBERON:0004572!9.33e-13!42;UBERON:0000490!1.05e-09!138;UBERON:0004573!1.11e-09!33;UBERON:0004571!1.11e-09!33;UBERON:0006914!8.83e-09!25;UBERON:0001986!1.20e-08!18;UBERON:0004638!1.20e-08!18;UBERON:0004852!1.20e-08!18;UBERON:0000487!1.34e-08!22;UBERON:0009569!4.57e-08!113;UBERON:0002100!7.30e-08!216;UBERON:0000477!1.17e-07!286;UBERON:0005256!1.29e-07!143;UBERON:0004111!3.18e-07!241;UBERON:0000947!6.93e-07!21;UBERON:0010191!6.93e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.01e-08;6!UBERON:0002358;1.01e-08;6!UBERON:0003684;1.01e-08;6!UBERON:0001178;1.01e-08;6!UBERON:0000947;1.82e-07;21!UBERON:0010191;1.82e-07;21!UBERON:0001637;2.52e-07;42!UBERON:0003509;2.52e-07;42!UBERON:0004572;2.52e-07;42!UBERON:0007846;6.59e-07;3!UBERON:0000043;6.59e-07;3!UBERON:0007845;6.59e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.01e-08;6!UBERON:0002358;1.01e-08;6!UBERON:0003684;1.01e-08;6!UBERON:0001178;1.01e-08;6!UBERON:0000947;1.82e-07;21!UBERON:0010191;1.82e-07;21!UBERON:0001637;2.52e-07;42!UBERON:0003509;2.52e-07;42!UBERON:0004572;2.52e-07;42!UBERON:0007846;6.59e-07;3!UBERON:0000043;6.59e-07;3!UBERON:0007845;6.59e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.01e-10,78;UBERON:0007798,1.01e-10,78;UBERON:0000055,3.87e-10,68;UBERON:0001637,2.40e-09,42;UBERON:0003509,2.40e-09,42;UBERON:0004572,2.40e-09,42;UBERON:0007500,4.71e-09,59;UBERON:0001981,4.71e-09,59;UBERON:0004537,4.71e-09,59;UBERON:0006965,4.71e-09,59;UBERON:0003688,5.93e-09,6;UBERON:0002358,5.93e-09,6;UBERON:0003684,5.93e-09,6;UBERON:0001178,5.93e-09,6;UBERON:0004535,6.73e-08,109;UBERON:0000947,9.83e-08,21;UBERON:0010191,9.83e-08,21;UBERON:0001009,1.70e-07,112;UBERON:0004573,2.17e-07,33;UBERON:0004571,2.17e-07,33;UBERON:0004872,3.40e-07,83;UBERON:0003914,4.08e-07,117;UBERON:0007846,9.67e-07,3;UBERON:0000043,9.67e-07,3;UBERON:0007845,9.67e-07,3 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.845726424575827,6.00439790118782,1.78784437770915,5.23403114460221,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,1.80719576192283,3.00802746381534,1.44846518960824,0,1.45990461090791,0.189069634328136,1.33037638477538,1.14185221401064,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,3.47140501607594,1.69592382577203,1.25849830862972,0.825354125820202,0.417989933073621,0,0.71153252537342,0.66944122552934,0.402829317109147,0.760272105718513,0.732186172644509,0.735326160691737,5.67099363517232,0.0892997282840798,0.44905874525234,1.35133776579987,3.06633274931766,0,1.09921046358244,0,0,0,4.96971951695318,1.13967460498122,0.397227542439656,2.86836620748814,0,1.12135520028461,3.20246987189115,2.4666754841716,0,0.67355336034844,0.653847612453835,0.151357427644931,1.15235184896,0.234321431833797,0,0,0,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0,1.18800285728205,1.23633464639278,0.910161361938026,0,0,0,0,0.438977620880838,2.75839016219118,1.35214253015937,2.04177929688038,1.79389635688862,0.213557388818567,0.423863802319124,1.50045548042201,0.206105058476878,1.28820270022815,0.18611685633159,1.0126579934476,0.389748020644795,0.504867548488229,0.0920498986422993,0,1.77504796258307,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0.310983165046111,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,1.2347220339942,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,2.11335649624479,1.87676382089396,2.31492756288305,1.71228737011138,0,0,0,0,0,0,0.671928512795438,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,1.16344544182,0,0,0.797814349754612,1.04007436911366,0,0,0,1.57275793023962,0,0,0,0.355391948742546,0,0,0.871533458600294,0.299918973546171,0,0,0,1.19812427745791,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,0.271265023699736,5.40724239980099,3.92543775353756,5.99269177128952,6.79420206957737,0,0,1.03473071292505,0.664225598535437,0.921845842708516,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,1.98486246255021,2.30192959932094,0.841980283299221,1.40953064181271,3.58195074346692,4.98647155545183,2.96836132889982,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0.316654886678627,0,0.850468526382578,5.39789790255348,4.62681758070868,0.812839312631559,1.50506932156456,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.576570202095319,0,0,0,3.1481234683064,0,0.924100740528266,0,0,0.37064843820784,0.572499546967965,0,0.632758849437452,0.762520775695299,0.255897791311334,0,0,0,0.719489830333259,0,0.471249609382746,0.404364963146632,1.58510321173008,0.421258456238981,1.46290121726877,0.243713489631284,2.11300293513511,0.136499911407986,0,0,0.551365343546124,0.66343897524122,1.75380354101505,0.578775534266688,0.655894752046633,1.01455188481352,1.54911749049875,0.563391205064483,0.286822704408103,0.491245205065606,0.35667105148125,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,1.09224469574562,0,0.284136146806413,0,0,0.921482106297696,0,0,0.111308705022906,0,0,1.79323189425963,0,0,1.1249555075237,0,5.28767299025073,0,0,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0.391329237864179,0,0,0,0,0.379119477770928,0,0,0,0.992975867626496,0.627865836814451,0,0.569219092059585,0,0,0,0,0.52418000472609,0.859930162358083,0,0,0,0.193978032976839,0.794305140223502,0,0.959293472527256,0,0,0,0.0801588202515337,0.426905989478705,0.19980960958213,0.144090417154106,0.229073192331831,0,0,0.248505071130865,0.235694034616795,0.815425236441684,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,1.14580212005842,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,12.6104959239841,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.272406812223151,0.482259445395058,0,0.415440338029185,0,0,0,0,0.157611414598396,0,0.211200673038813,1.25501137532991,1.15149118391667,0,0,0,0.542999601753713,0.864221491201268,0,1.19730191562487,0,3.9189245010647,0.4532483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| ||
|short_description=p12@CTGF | |short_description=p12@CTGF | ||
}} | }} |
Latest revision as of 18:47, 24 September 2015
Short description: | p12@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | 420bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.89e-11 | 76 |
omentum preadipocyte | 4.32e-07 | 3 |
fibrocyte | 9.67e-07 | 3 |
tendon cell | 9.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.01e-10 | 78 |
vascular system | 1.01e-10 | 78 |
vessel | 3.87e-10 | 68 |
artery | 2.40e-09 | 42 |
arterial blood vessel | 2.40e-09 | 42 |
arterial system | 2.40e-09 | 42 |
epithelial tube open at both ends | 4.71e-09 | 59 |
blood vessel | 4.71e-09 | 59 |
blood vasculature | 4.71e-09 | 59 |
vascular cord | 4.71e-09 | 59 |
omentum | 5.93e-09 | 6 |
peritoneum | 5.93e-09 | 6 |
abdominal cavity | 5.93e-09 | 6 |
visceral peritoneum | 5.93e-09 | 6 |
cardiovascular system | 6.73e-08 | 109 |
aorta | 9.83e-08 | 21 |
aortic system | 9.83e-08 | 21 |
circulatory system | 1.70e-07 | 112 |
systemic artery | 2.17e-07 | 33 |
systemic arterial system | 2.17e-07 | 33 |
splanchnic layer of lateral plate mesoderm | 3.40e-07 | 83 |
epithelial tube | 4.08e-07 | 117 |
dense regular connective tissue | 9.67e-07 | 3 |
tendon | 9.67e-07 | 3 |
regular connective tissue | 9.67e-07 | 3 |