FFCP PHASE1:Hg19::chr6:132270118..132270130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=256bp_to_AF127918_5end | |association_with_transcript=256bp_to_AF127918_5end | ||
|cluster_id=chr6:132270118..132270130,- | |||
|coexpression_cluster_id=C506 | |coexpression_cluster_id=C506 | ||
|description=CAGE_peak_13_at_CTGF_5end | |description=CAGE_peak_13_at_CTGF_5end | ||
|id=chr6:132270118..132270130,- | |id=chr6:132270118..132270130,- | ||
|ontology_enrichment_celltype=CL:0000055!9.61e-18!180;CL:0000222!4.81e-14!119;CL:0000057!1.92e-11!75;CL:0000192!8.70e-11!42;CL:0000514!8.70e-11!42;CL:0000359!2.31e-09!32;CL:0000680!2.99e-08!57;CL:0000056!2.99e-08!57;CL:0000355!2.99e-08!57;CL:0000183!3.79e-08!59;CL:0000220!4.12e-08!246;CL:0002321!4.14e-08!248;CL:0000187!5.67e-08!54;CL:0002334!3.32e-07!12;CL:0000115!4.29e-07!35;CL:0000213!6.78e-07!57;CL:0000215!6.78e-07!57;CL:0000144!7.20e-07!625;CL:0002371!8.29e-07!591 | |ontology_enrichment_celltype=CL:0000055!9.61e-18!180;CL:0000222!4.81e-14!119;CL:0000057!1.92e-11!75;CL:0000192!8.70e-11!42;CL:0000514!8.70e-11!42;CL:0000359!2.31e-09!32;CL:0000680!2.99e-08!57;CL:0000056!2.99e-08!57;CL:0000355!2.99e-08!57;CL:0000183!3.79e-08!59;CL:0000220!4.12e-08!246;CL:0002321!4.14e-08!248;CL:0000187!5.67e-08!54;CL:0002334!3.32e-07!12;CL:0000115!4.29e-07!35;CL:0000213!6.78e-07!57;CL:0000215!6.78e-07!57;CL:0000144!7.20e-07!625;CL:0002371!8.29e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.52e-08;13!CL:0000135;1.01e-07;3!CL:0000388;1.01e-07;3!CL:0002615;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.94e-10,76;CL:0000136,1.11e-08,15;CL:0000135,1.17e-07,3;CL:0000388,1.17e-07,3;CL:0002615,1.23e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.64e-19!79;UBERON:0007798!3.64e-19!79;UBERON:0004535!5.31e-16!110;UBERON:0001009!1.19e-15!113;UBERON:0000055!7.52e-14!69;UBERON:0003914!7.86e-14!118;UBERON:0004872!1.47e-13!84;UBERON:0001981!4.33e-12!60;UBERON:0007500!4.33e-12!60;UBERON:0004537!4.33e-12!60;UBERON:0006965!4.33e-12!60;UBERON:0001637!1.93e-11!42;UBERON:0003509!1.93e-11!42;UBERON:0004572!1.93e-11!42;UBERON:0000490!1.10e-10!138;UBERON:0005256!1.89e-09!143;UBERON:0002385!1.26e-08!63;UBERON:0001015!1.26e-08!63;UBERON:0000383!1.26e-08!63;UBERON:0001134!3.67e-08!61;UBERON:0002036!3.67e-08!61;UBERON:0003082!3.67e-08!61;UBERON:0000914!5.84e-08!83;UBERON:0002329!5.84e-08!83;UBERON:0003077!5.84e-08!83;UBERON:0003059!5.84e-08!83;UBERON:0007282!5.84e-08!83;UBERON:0009618!5.84e-08!83;UBERON:0007285!5.84e-08!83;UBERON:0002100!1.92e-07!216;UBERON:0004573!5.58e-07!33;UBERON:0004571!5.58e-07!33;UBERON:0000477!8.60e-07!286;UBERON:0004290!8.85e-07!70 | |ontology_enrichment_uberon=UBERON:0002049!3.64e-19!79;UBERON:0007798!3.64e-19!79;UBERON:0004535!5.31e-16!110;UBERON:0001009!1.19e-15!113;UBERON:0000055!7.52e-14!69;UBERON:0003914!7.86e-14!118;UBERON:0004872!1.47e-13!84;UBERON:0001981!4.33e-12!60;UBERON:0007500!4.33e-12!60;UBERON:0004537!4.33e-12!60;UBERON:0006965!4.33e-12!60;UBERON:0001637!1.93e-11!42;UBERON:0003509!1.93e-11!42;UBERON:0004572!1.93e-11!42;UBERON:0000490!1.10e-10!138;UBERON:0005256!1.89e-09!143;UBERON:0002385!1.26e-08!63;UBERON:0001015!1.26e-08!63;UBERON:0000383!1.26e-08!63;UBERON:0001134!3.67e-08!61;UBERON:0002036!3.67e-08!61;UBERON:0003082!3.67e-08!61;UBERON:0000914!5.84e-08!83;UBERON:0002329!5.84e-08!83;UBERON:0003077!5.84e-08!83;UBERON:0003059!5.84e-08!83;UBERON:0007282!5.84e-08!83;UBERON:0009618!5.84e-08!83;UBERON:0007285!5.84e-08!83;UBERON:0002100!1.92e-07!216;UBERON:0004573!5.58e-07!33;UBERON:0004571!5.58e-07!33;UBERON:0000477!8.60e-07!286;UBERON:0004290!8.85e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.67e-10;6!UBERON:0002358;3.67e-10;6!UBERON:0003684;3.67e-10;6!UBERON:0001178;3.67e-10;6!UBERON:0001637;7.64e-10;42!UBERON:0003509;7.64e-10;42!UBERON:0004572;7.64e-10;42!UBERON:0007846;1.01e-07;3!UBERON:0000043;1.01e-07;3!UBERON:0007845;1.01e-07;3!UBERON:0004573;1.43e-07;33!UBERON:0004571;1.43e-07;33!UBERON:0000947;2.51e-07;21!UBERON:0010191;2.51e-07;21!UBERON:0007500;8.64e-07;56!UBERON:0001981;8.64e-07;56!UBERON:0004537;8.64e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.14e-12,83;UBERON:0001637,1.21e-11,42;UBERON:0003509,1.21e-11,42;UBERON:0004572,1.21e-11,42;UBERON:0002049,1.57e-11,78;UBERON:0007798,1.57e-11,78;UBERON:0004535,1.62e-11,109;UBERON:0001009,5.38e-11,112;UBERON:0000055,1.41e-10,68;UBERON:0007500,2.63e-10,59;UBERON:0001981,2.63e-10,59;UBERON:0004537,2.63e-10,59;UBERON:0006965,2.63e-10,59;UBERON:0003688,3.45e-10,6;UBERON:0002358,3.45e-10,6;UBERON:0003684,3.45e-10,6;UBERON:0001178,3.45e-10,6;UBERON:0003914,1.75e-09,117;UBERON:0004573,5.08e-09,33;UBERON:0004571,5.08e-09,33;UBERON:0007846,1.17e-07,3;UBERON:0000043,1.17e-07,3;UBERON:0007845,1.17e-07,3;UBERON:0000947,1.61e-07,21;UBERON:0010191,1.61e-07,21 | |||
|phase1_expression=2.18014055124668,1.07050261945492,1.12763523276777,12.0087958023756,1.78784437770915,7.85104671690332,2.53299878168311,0,0,0.737201809504527,0,0,0.791300934685361,0.74259811776028,0.662794751455832,1.34465029290355,2.41077811209591,0,1.46379839637152,0.123121058076788,0,0.313454721478088,0,0,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.44575660953827,3.50936537445123,1.44846518960824,0,9.24606253575008,0.189069634328136,1.55210578223795,1.05401742831751,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,1.6507082516404,2.08994966536811,0.775250277507987,0.71153252537342,0.66944122552934,0,0,1.22031028774085,0.735326160691737,3.24056779152704,0.267899184852239,0.22452937262617,0.337834441449967,0,0,1.09921046358244,0,0,0,2.48485975847659,1.77282716330412,0.529636723252875,2.58152958673932,0,2.24271040056923,6.4049397437823,1.48000529050296,0.622422070799533,0.942974704487816,1.14423332179421,0.454072282934794,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0.989067717114227,0,0,0,0,0,0.877955241761676,1.5324389789951,0.150238058906597,2.04177929688038,2.15267562826634,0.427114777637135,0.211931901159562,1.80054657650641,0,1.28820270022815,0.37223371266318,0.843881661206331,0.389748020644795,0.252433774244115,0.0920498986422993,0.161646056818812,2.84007674013291,0.10075209822764,0.508681776931463,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,1.28648187638577,0,2.78620756819187,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0.721832238805369,3.70388410061289,2.09279567458058,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.2933531432838,0.904902010304444,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0,0,2.39624855491583,0,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.45579603071565,2.85486382075459,1.73472656537328,0.585707074963566,0,0,2.0694614258501,0,0.921845842708516,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,0.561320188866147,0.640695746278505,4.60536524160033,4.82561763430822,8.90508398669946,0.925258162815933,1.77561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0,0,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,2.27466768141793,0.340187410553031,0.647747748306418,4.62681758070868,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,1.31205858279882,0,0,0.0915694648183434,0,0,0,3.21367859688319,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,2.83331112147576,0,0,2.12922412126809,0,0.37064843820784,0.715624433709956,1.48863347743867,0.632758849437452,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.706874414074119,0.808729926293264,1.58510321173008,0,0,0.487426979262569,2.11300293513511,0,0.282810863907425,1.13008116620243,0,1.32687795048244,2.63070531152258,1.15755106853338,1.9676842561399,0.405820753925408,0.92947049429925,0.563391205064483,0.286822704408103,0.491245205065606,0.7133421029625,0,0.844430541190656,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0,0.23874448473769,0,0.307160702099232,0,0,0.222617410045812,0,0,1.79323189425963,0,0,1.1249555075237,0,7.46495010388338,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0.638002319463839,0.732780747214898,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0.441280633457501,0.225980740780532,0.274083849293502,0,0,0,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0,0.235694034616795,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0,0,0,0.429226048136571,0,0.0671834724867263,2.52209918479682,0,0.315132729228895,0.0824158583811665,0.0674035438541849,0.295282444544246,0,0.795229689809303,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0.864221491201268,0,0,0,3.06698439213759,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0.447764408660622,0.467426619694449,0,0,0,0,0,0.151230923763239,1.08806040407946,0.73927574994817,1.59296767163702,0,0.776314784381297,0.41470620784085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| ||
|short_description=p13@CTGF | |short_description=p13@CTGF | ||
}} | }} |
Latest revision as of 18:50, 24 September 2015
Short description: | p13@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | 256bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.94e-10 | 76 |
fat cell | 1.11e-08 | 15 |
fibrocyte | 1.17e-07 | 3 |
tendon cell | 1.17e-07 | 3 |
adipocyte of omentum tissue | 1.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.14e-12 | 83 |
artery | 1.21e-11 | 42 |
arterial blood vessel | 1.21e-11 | 42 |
arterial system | 1.21e-11 | 42 |
vasculature | 1.57e-11 | 78 |
vascular system | 1.57e-11 | 78 |
cardiovascular system | 1.62e-11 | 109 |
circulatory system | 5.38e-11 | 112 |
vessel | 1.41e-10 | 68 |
epithelial tube open at both ends | 2.63e-10 | 59 |
blood vessel | 2.63e-10 | 59 |
blood vasculature | 2.63e-10 | 59 |
vascular cord | 2.63e-10 | 59 |
omentum | 3.45e-10 | 6 |
peritoneum | 3.45e-10 | 6 |
abdominal cavity | 3.45e-10 | 6 |
visceral peritoneum | 3.45e-10 | 6 |
epithelial tube | 1.75e-09 | 117 |
systemic artery | 5.08e-09 | 33 |
systemic arterial system | 5.08e-09 | 33 |
dense regular connective tissue | 1.17e-07 | 3 |
tendon | 1.17e-07 | 3 |
regular connective tissue | 1.17e-07 | 3 |
aorta | 1.61e-07 | 21 |
aortic system | 1.61e-07 | 21 |