FFCP PHASE1:Hg19::chr6:132270563..132270604,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:132270563..132270604,- to FFCP PHASE1:Hg19::chr6:132270563..132270604,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-176bp_to_AF127918_5end | |||
|cluster_id=chr6:132270563..132270604,- | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_3_at_CTGF_5end | |||
|id=chr6:132270563..132270604,- | |||
|ontology_enrichment_celltype=CL:0000222!4.41e-23!119;CL:0000055!1.98e-20!180;CL:0000680!3.48e-13!57;CL:0000056!3.48e-13!57;CL:0000355!3.48e-13!57;CL:0000192!8.18e-13!42;CL:0000514!8.18e-13!42;CL:0000183!8.94e-13!59;CL:0000187!1.27e-12!54;CL:0000359!2.65e-12!32;CL:0000393!2.43e-11!60;CL:0000211!2.43e-11!60;CL:0002139!1.26e-10!24;CL:0000220!1.62e-10!246;CL:0000115!1.78e-10!35;CL:0002321!2.13e-10!248;CL:0000213!4.88e-10!57;CL:0000215!4.88e-10!57;CL:0000057!5.29e-10!75;CL:0002078!6.04e-10!44;CL:0000071!1.18e-07!18;CL:0002546!1.18e-07!18;CL:0002334!9.73e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.15e-15;32!CL:0002139;5.85e-13;24!CL:0000115;4.41e-12;36!CL:0002078;4.36e-09;45!CL:0000192;4.69e-09;43!CL:0000071;8.66e-09;18!CL:0002334;2.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.28e-17,121;CL:0000359,5.61e-15,32;CL:0000115,3.54e-14,36;CL:0002139,5.32e-13,24;CL:0002078,1.69e-12,45;CL:0000192,3.91e-12,43;CL:0000514,3.91e-12,43;CL:0000057,1.17e-10,76;CL:0000187,1.50e-09,55;CL:0000680,2.76e-09,58;CL:0000056,2.76e-09,58;CL:0000355,2.76e-09,58;CL:0000213,7.47e-09,58;CL:0000215,7.47e-09,58;CL:0000071,7.81e-09,18;CL:0002546,7.81e-09,18;CL:0000393,2.88e-08,61;CL:0000211,2.88e-08,61;CL:0002334,1.84e-07,12;CL:0002321,5.90e-07,250;CL:0002494,8.30e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.69e-09;43!CL:0002546;8.66e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.76e-27!79;UBERON:0007798!5.76e-27!79;UBERON:0004872!3.10e-25!84;UBERON:0000055!4.01e-24!69;UBERON:0001981!1.85e-22!60;UBERON:0007500!1.85e-22!60;UBERON:0004537!1.85e-22!60;UBERON:0006965!1.85e-22!60;UBERON:0003914!3.49e-22!118;UBERON:0004535!3.08e-20!110;UBERON:0001637!2.51e-19!42;UBERON:0003509!2.51e-19!42;UBERON:0004572!2.51e-19!42;UBERON:0001009!3.42e-19!113;UBERON:0000490!5.11e-16!138;UBERON:0005256!3.93e-15!143;UBERON:0004573!2.47e-14!33;UBERON:0004571!2.47e-14!33;UBERON:0002385!3.61e-13!63;UBERON:0001015!3.61e-13!63;UBERON:0000383!3.61e-13!63;UBERON:0002100!5.09e-13!216;UBERON:0000914!7.73e-13!83;UBERON:0002329!7.73e-13!83;UBERON:0003077!7.73e-13!83;UBERON:0003059!7.73e-13!83;UBERON:0007282!7.73e-13!83;UBERON:0009618!7.73e-13!83;UBERON:0007285!7.73e-13!83;UBERON:0001134!8.16e-13!61;UBERON:0002036!8.16e-13!61;UBERON:0003082!8.16e-13!61;UBERON:0000119!9.83e-12!312;UBERON:0000477!1.41e-11!286;UBERON:0004290!1.42e-11!70;UBERON:0000483!3.15e-11!309;UBERON:0000486!3.41e-11!82;UBERON:0000468!5.24e-10!659;UBERON:0000947!8.73e-10!21;UBERON:0010191!8.73e-10!21;UBERON:0004111!5.72e-09!241;UBERON:0003104!6.60e-09!238;UBERON:0009142!6.60e-09!238;UBERON:0000926!1.44e-08!448;UBERON:0004120!1.44e-08!448;UBERON:0006603!1.44e-08!448;UBERON:0000475!3.02e-08!365;UBERON:0000025!4.32e-08!194;UBERON:0001986!1.18e-07!18;UBERON:0004638!1.18e-07!18;UBERON:0004852!1.18e-07!18;UBERON:0000467!3.75e-07!625;UBERON:0000481!3.97e-07!347;UBERON:0000480!5.14e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.57e-21;42!UBERON:0003509;7.57e-21;42!UBERON:0004572;7.57e-21;42!UBERON:0004573;8.88e-18;33!UBERON:0004571;8.88e-18;33!UBERON:0007500;2.44e-15;56!UBERON:0001981;2.44e-15;56!UBERON:0004537;2.44e-15;56!UBERON:0000055;3.21e-13;65!UBERON:0002049;4.66e-13;75!UBERON:0007798;4.66e-13;75!UBERON:0000947;7.21e-13;21!UBERON:0010191;7.21e-13;21!UBERON:0003914;1.61e-10;74!UBERON:0004638;8.66e-09;18!UBERON:0001986;8.66e-09;18!UBERON:0004852;8.66e-09;18!UBERON:0004535;5.26e-08;109!UBERON:0006914;1.09e-07;25!UBERON:0003688;1.72e-07;6!UBERON:0002358;1.72e-07;6!UBERON:0003684;1.72e-07;6!UBERON:0001178;1.72e-07;6!UBERON:0000487;2.73e-07;22!UBERON:0004457;3.62e-07;9!UBERON:0000042;3.62e-07;9!UBERON:0001009;8.47e-07;112 | |||
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| ||
|short_description=p3@CTGF | |||
}} | }} |
Latest revision as of 18:58, 24 September 2015
Short description: | p3@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | -176bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.28e-17 | 121 |
vascular associated smooth muscle cell | 5.61e-15 | 32 |
endothelial cell | 3.54e-14 | 36 |
endothelial cell of vascular tree | 5.32e-13 | 24 |
meso-epithelial cell | 1.69e-12 | 45 |
smooth muscle cell | 3.91e-12 | 43 |
smooth muscle myoblast | 3.91e-12 | 43 |
fibroblast | 1.17e-10 | 76 |
muscle cell | 1.50e-09 | 55 |
muscle precursor cell | 2.76e-09 | 58 |
myoblast | 2.76e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.76e-09 | 58 |
lining cell | 7.47e-09 | 58 |
barrier cell | 7.47e-09 | 58 |
blood vessel endothelial cell | 7.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.81e-09 | 18 |
electrically responsive cell | 2.88e-08 | 61 |
electrically active cell | 2.88e-08 | 61 |
preadipocyte | 1.84e-07 | 12 |
embryonic cell | 5.90e-07 | 250 |
cardiocyte | 8.30e-07 | 16 |